BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0156.0082.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771775.1| hypothetical protein blr5135 [Bradyrhizobium ja...   250   7e-65
ref|YP_577701.1| histidine triad (HIT) protein [Nitrobacter hamb...   235   2e-60
ref|YP_533177.1| histidine triad (HIT) protein [Rhodopseudomonas...   223   9e-57
ref|YP_486021.1| histidine triad (HIT) protein [Rhodopseudomonas...   221   2e-56
ref|YP_570173.1| histidine triad (HIT) protein [Rhodopseudomonas...   219   1e-55

>ref|NP_771775.1| hypothetical protein blr5135 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50400.1| blr5135 [Bradyrhizobium japonicum USDA 110]
          Length = 142

 Score =  250 bits (638), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 120/139 (86%), Positives = 129/139 (92%)

Query: 3   AAYDSNNIFAKILRGELPCYKVYEDEHVFAFLDIMPRSPGHTLVIPKAAARNILDIKPDD 62
            AYD+NNIFAKILRGE PC+KVYEDEHVFAFLDIMPR PGHTLVIPKA ARNILDIKPDD
Sbjct: 2   TAYDTNNIFAKILRGEFPCHKVYEDEHVFAFLDIMPRVPGHTLVIPKAPARNILDIKPDD 61

Query: 63  YAHVARASHKIAAAAMKAFEADGITVQQFNEPAGGQVVFHLHMHVMPRKDGVALLPPASH 122
           YAHVAR +H+I+AAAMKAF+ADGITVQQFNEPAGGQVVFHLHMHV+PR DGVA+LPPAS 
Sbjct: 62  YAHVARGAHRISAAAMKAFKADGITVQQFNEPAGGQVVFHLHMHVLPRHDGVAMLPPASR 121

Query: 123 KEDGKVLEASAAKLIAALK 141
           KED KVLE +A KLIAALK
Sbjct: 122 KEDVKVLEENATKLIAALK 140


>ref|YP_577701.1| histidine triad (HIT) protein [Nitrobacter hamburgensis X14]
 gb|ABE63241.1| histidine triad (HIT) protein [Nitrobacter hamburgensis X14]
          Length = 142

 Score =  235 bits (599), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 111/138 (80%), Positives = 122/138 (88%)

Query: 3   AAYDSNNIFAKILRGELPCYKVYEDEHVFAFLDIMPRSPGHTLVIPKAAARNILDIKPDD 62
            AYD+NNIFAKILRGELPCYKVYE+EHV AFLDIMPR+PGH+LVIPK  +RNI DI PDD
Sbjct: 2   TAYDANNIFAKILRGELPCYKVYENEHVLAFLDIMPRAPGHSLVIPKTPSRNIFDISPDD 61

Query: 63  YAHVARASHKIAAAAMKAFEADGITVQQFNEPAGGQVVFHLHMHVMPRKDGVALLPPASH 122
           YAHVAR +HKIA A MKAF+ADGITVQQFNE AGGQVVFHLHMH+MPR+DG+ALLPPAS 
Sbjct: 62  YAHVARGTHKIARAGMKAFKADGITVQQFNEAAGGQVVFHLHMHMMPRRDGIALLPPASR 121

Query: 123 KEDGKVLEASAAKLIAAL 140
           KED KVLE  A  LI+AL
Sbjct: 122 KEDPKVLEEHARLLISAL 139


>ref|YP_533177.1| histidine triad (HIT) protein [Rhodopseudomonas palustris BisB18]
 gb|ABD88858.1| histidine triad (HIT) protein [Rhodopseudomonas palustris BisB18]
          Length = 142

 Score =  223 bits (567), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 119/138 (86%)

Query: 4   AYDSNNIFAKILRGELPCYKVYEDEHVFAFLDIMPRSPGHTLVIPKAAARNILDIKPDDY 63
           AYD +NIFAKILRGE  CYKVYE++HV AFLDIMPR+PGHTLV+PKAAARNILDI  +D+
Sbjct: 3   AYDPDNIFAKILRGEFSCYKVYENDHVLAFLDIMPRAPGHTLVLPKAAARNILDITAEDF 62

Query: 64  AHVARASHKIAAAAMKAFEADGITVQQFNEPAGGQVVFHLHMHVMPRKDGVALLPPASHK 123
           AHVAR +H IA AA  AF ADGITVQQF+EPAGGQVVFHLHMHV+PR D VALLPPAS K
Sbjct: 63  AHVARGAHTIARAAKTAFNADGITVQQFSEPAGGQVVFHLHMHVIPRHDDVALLPPASRK 122

Query: 124 EDGKVLEASAAKLIAALK 141
           ED  VLEA A KLIAAL+
Sbjct: 123 EDAAVLEAQAKKLIAALQ 140


>ref|YP_486021.1| histidine triad (HIT) protein [Rhodopseudomonas palustris HaA2]
 gb|ABD07110.1| Histidine triad (HIT) protein [Rhodopseudomonas palustris HaA2]
          Length = 142

 Score =  221 bits (564), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 118/138 (85%)

Query: 3   AAYDSNNIFAKILRGELPCYKVYEDEHVFAFLDIMPRSPGHTLVIPKAAARNILDIKPDD 62
            AYD  NIFAKILRGE PC+K+YED+HVFAFLDIMPRSPGHTLVIPKA ARNILDI  +D
Sbjct: 2   TAYDPENIFAKILRGEFPCHKIYEDDHVFAFLDIMPRSPGHTLVIPKAPARNILDITAED 61

Query: 63  YAHVARASHKIAAAAMKAFEADGITVQQFNEPAGGQVVFHLHMHVMPRKDGVALLPPASH 122
           +AHVAR +HKIA AAMKAF+ADGI VQQF+EPA GQVV+HLHMHVMPR DGV LLPPA+ 
Sbjct: 62  FAHVARGAHKIAHAAMKAFKADGIVVQQFSEPAAGQVVYHLHMHVMPRHDGVPLLPPATK 121

Query: 123 KEDGKVLEASAAKLIAAL 140
           KED  VLE  A KL AAL
Sbjct: 122 KEDTAVLEGHAEKLKAAL 139


>ref|YP_570173.1| histidine triad (HIT) protein [Rhodopseudomonas palustris BisB5]
 gb|ABE40272.1| histidine triad (HIT) protein [Rhodopseudomonas palustris BisB5]
          Length = 142

 Score =  219 bits (558), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 106/139 (76%), Positives = 119/139 (85%)

Query: 3   AAYDSNNIFAKILRGELPCYKVYEDEHVFAFLDIMPRSPGHTLVIPKAAARNILDIKPDD 62
            AYD NNIFAKILRGE  C+KVYED+HV AFLDIMPR+PGHTLVIPKA ARNILDI  +D
Sbjct: 2   TAYDPNNIFAKILRGEFSCHKVYEDDHVLAFLDIMPRAPGHTLVIPKAPARNILDISAED 61

Query: 63  YAHVARASHKIAAAAMKAFEADGITVQQFNEPAGGQVVFHLHMHVMPRKDGVALLPPASH 122
           +AHVAR +HKIA AAM+AF+ADGI VQQF+EPA GQVV+HLHMHVMPR DGV LLPPAS 
Sbjct: 62  FAHVARGAHKIAHAAMQAFKADGIVVQQFSEPAAGQVVYHLHMHVMPRHDGVPLLPPASR 121

Query: 123 KEDGKVLEASAAKLIAALK 141
           +E+  VLE  A KLIAAL+
Sbjct: 122 REETDVLERHAEKLIAALQ 140