BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0071.p (450 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004688378.1| acyl-CoA dehydrogenase MmgC [Cupriavidus nec... 297 3e-78 ref|YP_725378.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16]... 256 6e-66 ref|YP_004687972.1| acyl-CoA dehydrogenase [Cupriavidus necator ... 234 3e-59 ref|ZP_03546257.1| acyl-CoA dehydrogenase domain protein [Comamo... 181 2e-43 ref|ZP_03546223.1| acyl-CoA dehydrogenase domain protein [Comamo... 149 7e-34 >ref|YP_004688378.1| acyl-CoA dehydrogenase MmgC [Cupriavidus necator N-1] gb|AEI82340.1| acyl-CoA dehydrogenase MmgC [Cupriavidus necator N-1] Length = 753 Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 170/341 (49%), Positives = 208/341 (60%), Gaps = 3/341 (0%) Query: 9 DDVAGLLRDSLRGLLDEHWRP-LGLTASSSPDEVSAIWRKLVGQGVAALGAESDEGGLAE 67 D+ +LRDS RG L ++W L + SP EV IWR L QG+A LG+E EGGL E Sbjct: 17 DEERQMLRDSARGYLKQYWPADKALQLAQSPGEVGTIWRGLAQQGLAVLGSEPLEGGLRE 76 Query: 68 ILVVMAELGRAGCTAPMWSAALANLAISGSQVDV--AVDLLERLQSGEATVAFSFGALDP 125 ILVVM ELGRA C APM AALAN+A+ + D A LLE + GEA+VA +FGA D Sbjct: 77 ILVVMEELGRAACPAPMLGAALANIALRDAMGDFSAATCLLEGMHEGEASVAVAFGAYDG 136 Query: 126 DAGTGAVEVTDLKAKGVLRFVEAAGGATHLLVVLDQAQLGLINLDGPGVECVATRAMGAW 185 DA G+ ++ G + FVE A ATHLLV+ L ++ GV AT + Sbjct: 137 DANAGSAKLDGGLLTGRINFVEDAQHATHLLVLAPGPTLAIVERGAAGVSISATPGLSVP 196 Query: 186 GLYEVRLNKAPLTRIPIDAVDVDHLRIKGRAMLTARAYGAARRAFELVVDYARERHQFGH 245 L VRL K P I + V+ L R L AR+ GAA R+FE+V +YA+ER QFG Sbjct: 197 ALSSVRLEKVPAAVIQLPIQLVEDLSRVARLGLVARSLGAASRSFEMVAEYAKERQQFGQ 256 Query: 246 PIGRFQAIQHKLANCLIALEGVRLVLQHVARLHDGGDDDWRYFADCAAVYSGDALRRVSL 305 PIG+FQAIQHKLA+CL ALEGVR L + A +D G D WR FA Y+ ALR+VSL Sbjct: 257 PIGKFQAIQHKLADCLTALEGVRQTLNNAAINYDYGVDQWRVFASACYAYASPALRQVSL 316 Query: 306 ETQHTFGAIGYAEEHEAPIHFKRVHLDTIALGGASDAKRRL 346 ET HTFGAIGY+EEHEAP HF+R H D +GG A+ L Sbjct: 317 ETHHTFGAIGYSEEHEAPRHFRRTHGDLARMGGPMRAREEL 357 >ref|YP_725378.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] emb|CAJ92010.1| Acyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 391 Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 152/346 (43%), Positives = 205/346 (59%), Gaps = 7/346 (2%) Query: 8 NDDVAGLLRDSLRGLLDEHWRPL-GLTASSSPDEVSAIWRKLVGQGVAALGAESDEGGLA 66 +D+ +L++SLR LL W + ++ P +++IWR L QG+ +LG+ EGG+ Sbjct: 16 SDEERLMLQESLRRLLARRWPAAQAVEFAADPQALTSIWRDLAEQGLTSLGSNPQEGGMR 75 Query: 67 EILVVMAELGRAGCTAPMWSAALANLAISG-----SQVDVAVDLLERLQSGEATVAFSFG 121 EI V + ELGRA C AP+ AALANLA+S + D + LL L G+A+V+F+FG Sbjct: 76 EIAVALEELGRAACPAPLIGAALANLALSPHLPGRPRSDESAALLSALHRGDASVSFAFG 135 Query: 122 ALDPDAGTGAVEVTDLKAKGVLRFVEAAGGATHLLVVLDQAQ-LGLINLDGPGVECVATR 180 D D G V V + K +G + FVEA ATHLLV+ + L ++ G+ T Sbjct: 136 GFDGDRQAGGVRVANGKLQGRIAFVEAGTHATHLLVLAEPGPVLAIVPRGAVGLSVTETP 195 Query: 181 AMGAWGLYEVRLNKAPLTRIPIDAVDVDHLRIKGRAMLTARAYGAARRAFELVVDYARER 240 + L + P + +P+ + LR G L ARA G AR+ F++ V YA+ER Sbjct: 196 GLAVPPLAAASFDHVPASTLPLPPGLAEDLRRIGALALLARALGTARQGFDMAVAYAKER 255 Query: 241 HQFGHPIGRFQAIQHKLANCLIALEGVRLVLQHVARLHDGGDDDWRYFADCAAVYSGDAL 300 QFG PIGRFQAIQHKLANCL+ALE RL+L + AR HD G ++WR A ++G AL Sbjct: 256 QQFGQPIGRFQAIQHKLANCLMALEAARLMLHNAARTHDLGSENWRILGAAARAFAGPAL 315 Query: 301 RRVSLETQHTFGAIGYAEEHEAPIHFKRVHLDTIALGGASDAKRRL 346 R+VSLET HTFGAI Y+EEHEAP HF+R H D GG A+ L Sbjct: 316 RQVSLETHHTFGAIAYSEEHEAPRHFRRTHADLARHGGVRQAREEL 361 >ref|YP_004687972.1| acyl-CoA dehydrogenase [Cupriavidus necator N-1] gb|AEI81934.1| acyl-CoA dehydrogenase [Cupriavidus necator N-1] Length = 761 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 152/341 (44%), Positives = 199/341 (58%), Gaps = 9/341 (2%) Query: 14 LLRDSLRGLLDEHWRPLGLTASSSPDE--VSAIWRKLVGQGVAALGAESDEGGLAEILVV 71 +L++SLR LL HW P + D+ +++IWR L QG+ +LG+ EGGL EI V Sbjct: 22 MLQESLRRLLARHW-PAERAVEHAADQQALASIWRVLAEQGLTSLGSNPQEGGLREIAVA 80 Query: 72 MAELGRAGCTAPMWSAALANLAISGSQVDV-----AVDLLERLQSGEATVAFSFGALDPD 126 + ELGR C AP+ AALANLA+S + A LL L G+A+V+F+FG+ D D Sbjct: 81 LEELGRVACPAPLIGAALANLALSTHLPEEPAPGEAAALLGALHRGDASVSFAFGSFDGD 140 Query: 127 AGTGAVEVTDLKAKGVLRFVEAAGGATHLLVVLDQAQ-LGLINLDGPGVECVATRAMGAW 185 A G V G FVEAA ATHLLV+ + L ++ G+ T + Sbjct: 141 AQAGCVRFAKGTLHGRTAFVEAASHATHLLVLAEPGPVLAIVPCGAAGLTVTETSGLAVP 200 Query: 186 GLYEVRLNKAPLTRIPIDAVDVDHLRIKGRAMLTARAYGAARRAFELVVDYARERHQFGH 245 L V ++ + + + LR G L ARA GAAR+ F++ V YA+ER QFG Sbjct: 201 PLATVSFDRVAAAALQLPPGLAEDLRRIGGLALLARALGAARQGFDMAVAYAKERQQFGQ 260 Query: 246 PIGRFQAIQHKLANCLIALEGVRLVLQHVARLHDGGDDDWRYFADCAAVYSGDALRRVSL 305 PIGRFQAIQHKLANCL+ALE RL+LQ+ A HD G ++WR A ++G A+R+VSL Sbjct: 261 PIGRFQAIQHKLANCLMALEAARLMLQNAASTHDLGSENWRILGAAARAFAGPAVRQVSL 320 Query: 306 ETQHTFGAIGYAEEHEAPIHFKRVHLDTIALGGASDAKRRL 346 ET HT GAIGY+EEHEAP HF+R H D GG A+ L Sbjct: 321 ETHHTLGAIGYSEEHEAPRHFRRTHADLARHGGVRQAREEL 361 >ref|ZP_03546257.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gb|EED70543.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 737 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 131/333 (39%), Positives = 174/333 (52%), Gaps = 12/333 (3%) Query: 14 LLRDSLRGLLDEHW-RPLGLTASSSPDEVSAIWRKLVGQGVAALGAESDEGGLAEILVVM 72 L+RDS RGLL + W + A+ + +WRK QG AL DE GLA +V+M Sbjct: 15 LVRDSARGLLQDAWPASRAVAAAKDAAALKDMWRKAALQGWTALAPSQDEMGLAASIVLM 74 Query: 73 AELGRAGCTAPMWSAALANLAISGSQVDVAVDLLERLQSGEATVAFSFGALDPDAGTGAV 132 ELGRA C P+ A LAN ++ +Q + A LL +QSGEA VA+ A DP G Sbjct: 75 QELGRAACPLPLADAVLANAVLAQAQGEAAAQLLASVQSGEAIVAW---AADPHGG---- 127 Query: 133 EVTD-LKAKGVLRFVEAAGGATHLLVVLDQAQLGLINLDGPGVECVATRAMGAWGLYEVR 191 VTD G + FVE ATH LV + ++ ++ + G+ AT + L ++R Sbjct: 128 RVTDGATLDGTVSFVEHGAIATHFLVATGKGEIAIVPREAAGLAIDATPGLNVPPLSQLR 187 Query: 192 LNKAPLTRIPIDAVDVDHLRIKGRAMLTARAYGAARRAFELVVDYARERHQFGHPIGRFQ 251 + + + DV L R +L ARA G+A EL+ DYA+ R QFGH IG +Q Sbjct: 188 FTRVDTFQRVTTSFDVGTLTPLMRLLLAARATGSAGYGLELLTDYAKVRSQFGHKIGSYQ 247 Query: 252 AIQHKLANCLIALEGVRLVLQHVARLHDGGDDDWRYFADCAAVYSGDALRRVSLETQHTF 311 AIQHKLANC ++E RL L R + Y A AA +G LR V E H F Sbjct: 248 AIQHKLANCFTSVEICRLALVAAGR---ASQHERAYSAAVAAANAGQLLRDVVRELHHGF 304 Query: 312 GAIGYAEEHEAPIHFKRVHLDTIALGGASDAKR 344 G I + +EHE P HF+R+H D LGG A+R Sbjct: 305 GGISFWDEHELPRHFRRIHGDLTRLGGVQQARR 337 >ref|ZP_03546223.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gb|EED70509.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 740 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 132/336 (39%), Positives = 165/336 (49%), Gaps = 20/336 (5%) Query: 14 LLRDSLRGLLDEHW-RPLGLTASSSPDEVSAIWRKLVGQGVAALGAESDEGGLAEILVVM 72 ++RD+ R LLD W + PDE+ +WR V QG L + E GLA LV+ Sbjct: 25 MVRDAARALLDTEWPSAQAAALAQQPDELRRLWRHAVQQGWTQLELDDAELGLAAALVLQ 84 Query: 73 AELGRAGCTAPMWSAALANLAISGSQVDVAVDLLERLQSGEATVAFSFGALDPDAGTGAV 132 ELGRA C P+ + LA+ ++ S A L L G L P T + Sbjct: 85 QELGRAECPLPLMDSLLADAVLAASSQAEAASLRAALHEGN---------LIP---TWCL 132 Query: 133 EVTDLKAKGVLRFVEAAGGATHLLVVLDQAQLGLINLDGPGVECVATRAMGAWGLYEVRL 192 E T L FVE ATHL ++ A L+ + AT M L EV L Sbjct: 133 EPTGQPLGTRLPFVEHTAFATHLFILTGAADEVLV-VPMSTARVQATPGMARPPLAEVSL 191 Query: 193 NKAP-LTRIPIDAVDVDHLRIKGRAMLTARAYGAARRAFELVVDYARERHQFGHPIGRFQ 251 + A + RI A +V L R +L ARA GAA+ +L+ DYAR R QFG IG+FQ Sbjct: 192 DGAQGVERIHTGA-EVQALPGLARLLLAARALGAAQHGLQLLCDYARVRQQFGQLIGQFQ 250 Query: 252 AIQHKLANCLIALEGVRLVLQHVARLHDGGDDDWR-YFADCAAVYSGDALRRVSLETQHT 310 AIQHKLANCL+ E RL L H DGGD R Y A A +G LR V LE H Sbjct: 251 AIQHKLANCLMGTEVCRLALLHAV---DGGDLAARPYRAATAVALAGQYLRPVVLELMHG 307 Query: 311 FGAIGYAEEHEAPIHFKRVHLDTIALGGASDAKRRL 346 FG + + EEHE P F+RVH D LGG A+ +L Sbjct: 308 FGGVSFWEEHEMPRIFRRVHADVTRLGGVGAAREQL 343