BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0063.p (493 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769635.1| hypothetical protein blr2995 [Bradyrhizobium ja... 858 0.0 ref|YP_001238993.1| hypothetical protein BBta_2962 [Bradyrhizobi... 845 0.0 ref|YP_001204678.1| hypothetical protein BRADO2623 [Bradyrhizobi... 834 0.0 ref|ZP_01047637.1| Fe-S oxidoreductase [Nitrobacter sp. Nb-311A]... 769 0.0 ref|YP_318882.1| Fe-S oxidoreductase [Nitrobacter winogradskyi N... 768 0.0 >ref|NP_769635.1| hypothetical protein blr2995 [Bradyrhizobium japonicum USDA 110] dbj|BAC48260.1| blr2995 [Bradyrhizobium japonicum USDA 110] Length = 546 Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/487 (81%), Positives = 450/487 (92%) Query: 7 PTXLLLIAAYLPENWPVRFIDENLRPATAEDFEWADAVFVSGMHIQRQQMNDICRRAHDH 66 P LLL+AAYLPE+W V+F+DENLR T E+F WA+ VFVSGMHIQRQQMNDICRRAH+ Sbjct: 60 PQGLLLLAAYLPEDWQVKFVDENLRRTTKEEFGWAEVVFVSGMHIQRQQMNDICRRAHEF 119 Query: 67 DLVVAIGGPSVSACPDYYPSFDYLHVGELGDATNELIKRLADDTSRPDEQVVLKTIDRLP 126 DL VA+GGPSVSACPDYYPSFDYLHVGELGDATN+LI+ L+ D SRP+ QVVL T DR+P Sbjct: 120 DLPVALGGPSVSACPDYYPSFDYLHVGELGDATNQLIEILSRDISRPETQVVLTTKDRVP 179 Query: 127 MTDFPLPAYELAETKKYFLGSIQFSSGCPYQCEFCDIPGLYGRNPRLKSPQQIIAELDKL 186 MT+FP+PAYELA+ KKYFLGSIQ+SSGCPYQCEFCDIPGLYGRNPR+KSP+QIIAELD+L Sbjct: 180 MTEFPIPAYELADVKKYFLGSIQYSSGCPYQCEFCDIPGLYGRNPRIKSPEQIIAELDRL 239 Query: 187 RACGATDTVYFVDDNFIGNRKAASELLPHLIEWQKRTGYVTRLACEATLNIAKRPEILEK 246 R CG TDTVYFVDDNFIGNRKAA +LLPHLIEWQK+TGYV RLACEATLNIAKRPEILEK Sbjct: 240 RECGMTDTVYFVDDNFIGNRKAAMDLLPHLIEWQKKTGYVVRLACEATLNIAKRPEILEK 299 Query: 247 MREAFFVTIFVGIETPDPDALKAMHKDQNMMVPILEGVRTINSFGMEVVSGIIMGLDTDK 306 MREA+F+TIF GIETPDPDALKAMHKD NMMVPILEGVRTINS+GMEVVSGIIMGLDTDK Sbjct: 300 MREAYFITIFCGIETPDPDALKAMHKDHNMMVPILEGVRTINSYGMEVVSGIIMGLDTDK 359 Query: 307 PQTGDALLSFVEESRIPLLTINLLQALPKTPLWDRLEKAGRLIDDEGRDSNVEFLLPYED 366 P T +ALL+FVEESRIPLLTINLLQALPKTPLWDRLE+ GRLI+D+GRDSNV+FLLPY+D Sbjct: 360 PNTSEALLAFVEESRIPLLTINLLQALPKTPLWDRLEREGRLIEDDGRDSNVDFLLPYDD 419 Query: 367 VVSSWRKCMEVAYEPNKLFARYLHQCNYTYANRIKVPVSPEMKSWANIRRGLIMLRNIFW 426 VV+SW+ M VAYEP K+FAR+ +QC++ Y +R+K+PV+ EMK+W NIRRGL+MLRNIFW Sbjct: 420 VVASWKHAMGVAYEPEKVFARFQYQCDHVYPHRLKMPVADEMKTWPNIRRGLVMLRNIFW 479 Query: 427 KVGVLGDYKRVFWRFALGRLKRGDIEGLISATLVAHHLITFARAASSGRQNASNYSIRLR 486 KVGVLGDY+RVFW+FALGR+KRGD+EGLI TL+AHHLITFARAASSG+QNASNYSIRLR Sbjct: 480 KVGVLGDYRRVFWKFALGRIKRGDLEGLIGCTLIAHHLITFARAASSGKQNASNYSIRLR 539 Query: 487 EASVPAE 493 EASVPAE Sbjct: 540 EASVPAE 546 >ref|YP_001238993.1| hypothetical protein BBta_2962 [Bradyrhizobium sp. BTAi1] gb|ABQ35087.1| hypothetical protein BBta_2962 [Bradyrhizobium sp. BTAi1] Length = 528 Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/486 (81%), Positives = 439/486 (90%) Query: 7 PTXLLLIAAYLPENWPVRFIDENLRPATAEDFEWADAVFVSGMHIQRQQMNDICRRAHDH 66 P LLLIAAYLP +W VRFIDEN+R A AEDF WA+AVFVSGMHIQRQQMNDIC+RAH Sbjct: 42 PQGLLLIAAYLPSSWQVRFIDENIRAAQAEDFAWAEAVFVSGMHIQRQQMNDICQRAHAF 101 Query: 67 DLVVAIGGPSVSACPDYYPSFDYLHVGELGDATNELIKRLADDTSRPDEQVVLKTIDRLP 126 DL VA+GGPSVSACPDYYPSFDYLHVGELGDAT+ELI+RLA D SRP++QVVL+T +R+ Sbjct: 102 DLPVALGGPSVSACPDYYPSFDYLHVGELGDATDELIERLARDPSRPEQQVVLRTKERVA 161 Query: 127 MTDFPLPAYELAETKKYFLGSIQFSSGCPYQCEFCDIPGLYGRNPRLKSPQQIIAELDKL 186 MT+FP+PAYELAE K YFLGSIQ+SSGCPYQCEFCDIPGLYGRNPR+K+PQQIIAELDKL Sbjct: 162 MTEFPVPAYELAEVKNYFLGSIQYSSGCPYQCEFCDIPGLYGRNPRIKTPQQIIAELDKL 221 Query: 187 RACGATDTVYFVDDNFIGNRKAASELLPHLIEWQKRTGYVTRLACEATLNIAKRPEILEK 246 R CG T +VYFVDDNFIGNRKAA ELLPHLIEWQKRTGYV RLACEATLNIAKRPEILEK Sbjct: 222 RECGVTGSVYFVDDNFIGNRKAALELLPHLIEWQKRTGYVMRLACEATLNIAKRPEILEK 281 Query: 247 MREAFFVTIFVGIETPDPDALKAMHKDQNMMVPILEGVRTINSFGMEVVSGIIMGLDTDK 306 MREA+F+TIF GIETPDPDAL AM KD NMMVPILEG+RTINS+GMEVVSGIIMGLDTD Sbjct: 282 MREAYFITIFCGIETPDPDALTAMQKDHNMMVPILEGIRTINSYGMEVVSGIIMGLDTDT 341 Query: 307 PQTGDALLSFVEESRIPLLTINLLQALPKTPLWDRLEKAGRLIDDEGRDSNVEFLLPYED 366 PQT DALL FVEESRIPLLTINLLQALPKTPLWDRLE+ GRL+ D+GRDSNV+FL+PY++ Sbjct: 342 PQTADALLQFVEESRIPLLTINLLQALPKTPLWDRLEREGRLVHDDGRDSNVKFLMPYDE 401 Query: 367 VVSSWRKCMEVAYEPNKLFARYLHQCNYTYANRIKVPVSPEMKSWANIRRGLIMLRNIFW 426 VVS+WR+CM+VAYEP +L+ARY HQC+ TYANRIKVPVS EMKSW NIRRGL+M+ IFW Sbjct: 402 VVSAWRRCMDVAYEPERLYARYQHQCDTTYANRIKVPVSAEMKSWPNIRRGLVMMAKIFW 461 Query: 427 KVGVLGDYKRVFWRFALGRLKRGDIEGLISATLVAHHLITFARAASSGRQNASNYSIRLR 486 KVGVLGDYKR FWRFA +L+RG+IE I+ ++AHHLI FARAAS G QNASNYSIRLR Sbjct: 462 KVGVLGDYKRPFWRFAWTQLRRGEIENFIAVAMIAHHLIMFARAASRGHQNASNYSIRLR 521 Query: 487 EASVPA 492 EA++PA Sbjct: 522 EAAIPA 527 >ref|YP_001204678.1| hypothetical protein BRADO2623 [Bradyrhizobium sp. ORS 278] emb|CAL76441.1| Conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 528 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/486 (79%), Positives = 433/486 (89%) Query: 7 PTXLLLIAAYLPENWPVRFIDENLRPATAEDFEWADAVFVSGMHIQRQQMNDICRRAHDH 66 P LLLIAAYLP +W VRFIDEN+RPA EDF WA+AVFVSGMHIQRQQMNDICRRAH Sbjct: 42 PQGLLLIAAYLPSSWQVRFIDENIRPARDEDFAWAEAVFVSGMHIQRQQMNDICRRAHAF 101 Query: 67 DLVVAIGGPSVSACPDYYPSFDYLHVGELGDATNELIKRLADDTSRPDEQVVLKTIDRLP 126 DL VA+GGPSVSACPDYYP FDYLHVGELGDAT+ LI+RLA D SRP QVVL+T +R+ Sbjct: 102 DLPVALGGPSVSACPDYYPDFDYLHVGELGDATDALIERLAHDVSRPASQVVLRTGERVA 161 Query: 127 MTDFPLPAYELAETKKYFLGSIQFSSGCPYQCEFCDIPGLYGRNPRLKSPQQIIAELDKL 186 MT+FP+PAYELAE KYFLGSIQ+SSGCPYQCEFCDIPGLYGRNPR+K+PQQIIAELDKL Sbjct: 162 MTEFPVPAYELAEVSKYFLGSIQYSSGCPYQCEFCDIPGLYGRNPRIKTPQQIIAELDKL 221 Query: 187 RACGATDTVYFVDDNFIGNRKAASELLPHLIEWQKRTGYVTRLACEATLNIAKRPEILEK 246 R CG T +VYFVDDNFIGNRKAA +LLPHLIEWQKRTGYV RLACEATLNIAKRPEILEK Sbjct: 222 RECGVTGSVYFVDDNFIGNRKAAMDLLPHLIEWQKRTGYVMRLACEATLNIAKRPEILEK 281 Query: 247 MREAFFVTIFVGIETPDPDALKAMHKDQNMMVPILEGVRTINSFGMEVVSGIIMGLDTDK 306 MREA+F+TIF GIETPDPDAL AM KD NMMVPILEG+RTINS+GMEVVSGIIMGLDTD Sbjct: 282 MREAYFITIFCGIETPDPDALTAMQKDHNMMVPILEGIRTINSYGMEVVSGIIMGLDTDT 341 Query: 307 PQTGDALLSFVEESRIPLLTINLLQALPKTPLWDRLEKAGRLIDDEGRDSNVEFLLPYED 366 PQT DALL FVEESRIPLLTINLLQALPKTPLWDRLE+ GRL+ D+ RDSN++FL+PY++ Sbjct: 342 PQTADALLQFVEESRIPLLTINLLQALPKTPLWDRLEREGRLLQDDSRDSNIKFLMPYDE 401 Query: 367 VVSSWRKCMEVAYEPNKLFARYLHQCNYTYANRIKVPVSPEMKSWANIRRGLIMLRNIFW 426 VVS WR+CM+ AYEP +L+ARY HQC++TY+NRIKVPVS EMK+W NIRRGL+M+ IFW Sbjct: 402 VVSGWRRCMDEAYEPERLYARYQHQCDHTYSNRIKVPVSDEMKTWPNIRRGLVMMGKIFW 461 Query: 427 KVGVLGDYKRVFWRFALGRLKRGDIEGLISATLVAHHLITFARAASSGRQNASNYSIRLR 486 KVGVLGDYKR FWRFA +L+RG+IE I+ ++AHHLI FARAAS G QNASNYSIRLR Sbjct: 462 KVGVLGDYKRPFWRFAWTQLRRGEIENFIAVAMIAHHLIMFARAASRGHQNASNYSIRLR 521 Query: 487 EASVPA 492 EA+VPA Sbjct: 522 EAAVPA 527 >ref|ZP_01047637.1| Fe-S oxidoreductase [Nitrobacter sp. Nb-311A] gb|EAQ34397.1| Fe-S oxidoreductase [Nitrobacter sp. Nb-311A] Length = 491 Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/490 (74%), Positives = 418/490 (85%), Gaps = 4/490 (0%) Query: 7 PTXLLLIAAYLPENWPVRFIDENLRPATAEDFEWADAVFVSGMHIQRQQMNDICRRAHDH 66 P LLLIAAYLP +W VRFIDEN+R AT EDFEWA+AVFVSGMHIQRQQMNDICRRAH Sbjct: 3 PQGLLLIAAYLPADWQVRFIDENIRFATNEDFEWAEAVFVSGMHIQRQQMNDICRRAHAF 62 Query: 67 DLVVAIGGPSVSACPDYYPSFDYLHVGELGDATNELIKRLADDTSRPDEQVVLKTIDRLP 126 L VA+GGPSVSACPDYYPSFDYLHVGELGDAT++LI+RLA D SRPD QVVLKT DRL Sbjct: 63 ALPVALGGPSVSACPDYYPSFDYLHVGELGDATDQLIERLARDPSRPDRQVVLKTTDRLA 122 Query: 127 MTDFPLPAYELAETKKYFLGSIQFSSGCPYQCEFCDIPGLYGRNPRLKSPQQIIAELDKL 186 M FP+PAYELA+ K+YFLGSIQ+SSGCPYQCEFCDIPGLYGRNPRLK+P+QI ELDKL Sbjct: 123 MDQFPVPAYELADIKRYFLGSIQYSSGCPYQCEFCDIPGLYGRNPRLKTPEQITRELDKL 182 Query: 187 RACGATDTVYFVDDNFIGNRKAASELLPHLIEWQKRTGYVTRLACEATLNIAKRPEILEK 246 CG + +VYFVDDNFIGNRKAA ELLPHLIEWQK+TGYV R +CEATLNIAKRPEIL + Sbjct: 183 LECGISGSVYFVDDNFIGNRKAALELLPHLIEWQKKTGYVLRFSCEATLNIAKRPEILSQ 242 Query: 247 MREAFFVTIFVGIETPDPDALKAMHKDQNMMVPILEGVRTINSFGMEVVSGIIMGLDTDK 306 MR+AFF TIF GIETPDP ALKAMHKD NMMVPI++ +RT+N +GMEVVSGII+GLDTDK Sbjct: 243 MRDAFFATIFCGIETPDPVALKAMHKDHNMMVPIMDAIRTLNDYGMEVVSGIILGLDTDK 302 Query: 307 PQTGDALLSFVEESRIPLLTINLLQALPKTPLWDRLEKAGRLIDDEGRDSNVEFLLPYED 366 P+TG LL F++ S+IPLLTINLLQALPKTPLWDRL++ RLI+DEGRDSN++F LPYE Sbjct: 303 PETGQHLLEFIDHSQIPLLTINLLQALPKTPLWDRLKRENRLIEDEGRDSNIDFRLPYEH 362 Query: 367 VVSSWRKCMEVAYEPNKLFARYLHQCNYTYANRIKVPVSPEMKSWANIRRGLIMLRNIFW 426 VV++WR CM AYEP KL R+ +Q TY RI+ P +P+ +SW NI+ GL MLRNIFW Sbjct: 363 VVATWRNCMGRAYEPEKLLERFEYQIRETYPKRIQ-PRTPQQRSWRNIKLGLTMLRNIFW 421 Query: 427 KVGVLGDYKRVFWRFALGRLKRGDIEGLISATLVAHHLITFARAASSGRQNASNYSIRLR 486 KVG+ GDY+RVFW+FAL RL RG+IE LIS+ LVAHHLI FAR+AS G+ NAS YS++LR Sbjct: 422 KVGLRGDYRRVFWKFALRRLARGEIEYLISSVLVAHHLIMFARSASRGKTNASYYSLKLR 481 Query: 487 E---ASVPAE 493 E ASVPAE Sbjct: 482 ETAGASVPAE 491 >ref|YP_318882.1| Fe-S oxidoreductase [Nitrobacter winogradskyi Nb-255] gb|ABA05530.1| Fe-S oxidoreductase [Nitrobacter winogradskyi Nb-255] Length = 553 Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/486 (75%), Positives = 412/486 (84%), Gaps = 1/486 (0%) Query: 7 PTXLLLIAAYLPENWPVRFIDENLRPATAEDFEWADAVFVSGMHIQRQQMNDICRRAHDH 66 P LLLIAAYLP +W VRFIDEN+R AT EDFEWA+AVFVSGMHIQRQQMNDICRRAH Sbjct: 42 PQGLLLIAAYLPADWKVRFIDENIRFATDEDFEWAEAVFVSGMHIQRQQMNDICRRAHAF 101 Query: 67 DLVVAIGGPSVSACPDYYPSFDYLHVGELGDATNELIKRLADDTSRPDEQVVLKTIDRLP 126 +L VA+GGPSVSACPDYYPSFDYLHVGELGDAT+ELI+RLA D SRP QVVLKT RL Sbjct: 102 NLSVALGGPSVSACPDYYPSFDYLHVGELGDATDELIERLARDPSRPAAQVVLKTASRLD 161 Query: 127 MTDFPLPAYELAETKKYFLGSIQFSSGCPYQCEFCDIPGLYGRNPRLKSPQQIIAELDKL 186 M FP+PAYELA+ K YFLGSIQ+SSGCPYQCEFCDIPGLYGRNPRLK+P+QI ELDKL Sbjct: 162 MDKFPIPAYELADIKHYFLGSIQYSSGCPYQCEFCDIPGLYGRNPRLKTPEQITRELDKL 221 Query: 187 RACGATDTVYFVDDNFIGNRKAASELLPHLIEWQKRTGYVTRLACEATLNIAKRPEILEK 246 CG + +VYFVDDNFIGNRKAA ELLPHLIEWQK+TGYV R +CEATLNIAKRPEIL + Sbjct: 222 LECGISGSVYFVDDNFIGNRKAALELLPHLIEWQKKTGYVLRFSCEATLNIAKRPEILSQ 281 Query: 247 MREAFFVTIFVGIETPDPDALKAMHKDQNMMVPILEGVRTINSFGMEVVSGIIMGLDTDK 306 MREAFF TIF GIETPDP ALKAMHKD NMMVPI+E +RT+N +GMEVVSGII+GLDTDK Sbjct: 282 MREAFFATIFCGIETPDPVALKAMHKDHNMMVPIMEAIRTLNDYGMEVVSGIILGLDTDK 341 Query: 307 PQTGDALLSFVEESRIPLLTINLLQALPKTPLWDRLEKAGRLIDDEGRDSNVEFLLPYED 366 P+TG LL F++ SRIPLLTINLLQALPKTPLWDRL++ RLIDD+GRDSNV+F LPY+ Sbjct: 342 PETGQHLLEFIDHSRIPLLTINLLQALPKTPLWDRLKRENRLIDDDGRDSNVDFRLPYDH 401 Query: 367 VVSSWRKCMEVAYEPNKLFARYLHQCNYTYANRIKVPVSPEMKSWANIRRGLIMLRNIFW 426 VV++WR CM AYEP KL RY +Q TY RI+ P +P+ +SW NI+ GL MLRNIFW Sbjct: 402 VVATWRDCMGRAYEPEKLMERYEYQIRETYPKRIQ-PRTPQQRSWRNIKLGLTMLRNIFW 460 Query: 427 KVGVLGDYKRVFWRFALGRLKRGDIEGLISATLVAHHLITFARAASSGRQNASNYSIRLR 486 KVGV GDY+RVFW+FAL RL RG+IE LIS+ LVAHHLI FAR+AS G+ NAS YS++LR Sbjct: 461 KVGVRGDYRRVFWKFALRRLARGEIEYLISSVLVAHHLIMFARSASRGKTNASYYSLKLR 520 Query: 487 EASVPA 492 E + A Sbjct: 521 ETAETA 526