BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0156.0058.p         (78 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_570701.1| hypothetical protein RPD_3577 [Rhodopseudomonas...   113   1e-23
ref|YP_001204681.1| hypothetical protein BRADO2626 [Bradyrhizobi...   107   8e-22
ref|YP_485341.1| hypothetical protein RPB_1722 [Rhodopseudomonas...   104   4e-21
ref|ZP_08629204.1| putative exported protein [Bradyrhizobiaceae ...    94   6e-18
ref|YP_531594.1| hypothetical protein RPC_1716 [Rhodopseudomonas...    94   6e-18

>ref|YP_570701.1| hypothetical protein RPD_3577 [Rhodopseudomonas palustris BisB5]
 gb|ABE40800.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 80

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/80 (67%), Positives = 66/80 (82%), Gaps = 2/80 (2%)

Query: 1  MRKFLLALALLSIPLSSGAFAQQQTR--GTPDEQKACTRDVQRHCRAVIDQGDFTILACL 58
          M+K L AL LL +P+S+GAFAQQQ +  GTP+EQ AC+RDVQRHCR ++DQGDF ILACL
Sbjct: 1  MQKTLFALTLLLVPISTGAFAQQQQQRSGTPEEQAACSRDVQRHCRKLMDQGDFAILACL 60

Query: 59 QQNRTKISAACDQVLKTHGQ 78
          ++NR KIS AC+QVL  HGQ
Sbjct: 61 KENRPKISRACNQVLVNHGQ 80


>ref|YP_001204681.1| hypothetical protein BRADO2626 [Bradyrhizobium sp. ORS 278]
 emb|CAL76444.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 77

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 1/78 (1%)

Query: 1  MRKFLLALALLSIPLSSGAFAQQQTRGTPDEQKACTRDVQRHCRAVIDQGDFTILACLQQ 60
          MRK  LAL+LLS+ +S+  FAQ   RGT +EQ ACTRDVQ+ CR+VIDQGDFTILACL++
Sbjct: 1  MRKICLALSLLSLTVSTAVFAQG-GRGTAEEQAACTRDVQKFCRSVIDQGDFTILACLKE 59

Query: 61 NRTKISAACDQVLKTHGQ 78
          NR KIS  CD+VLKTH Q
Sbjct: 60 NRPKISPDCDKVLKTHNQ 77


>ref|YP_485341.1| hypothetical protein RPB_1722 [Rhodopseudomonas palustris HaA2]
 gb|ABD06430.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 79

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/79 (69%), Positives = 68/79 (86%), Gaps = 1/79 (1%)

Query: 1  MRKFLLALALLSIPLSSGAFAQQQTR-GTPDEQKACTRDVQRHCRAVIDQGDFTILACLQ 59
          M+K L+AL LL +P+S+GAFAQQQ R GTP+EQ AC+RDV RHCRA++DQGDF ILACL+
Sbjct: 1  MQKTLVALTLLLVPMSTGAFAQQQQRSGTPEEQAACSRDVSRHCRALMDQGDFAILACLK 60

Query: 60 QNRTKISAACDQVLKTHGQ 78
          +NR KIS AC+QVL +HGQ
Sbjct: 61 ENRPKISRACNQVLLSHGQ 79


>ref|ZP_08629204.1| putative exported protein [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07697.1| putative exported protein [Bradyrhizobiaceae bacterium SG-6C]
          Length = 78

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 2/79 (2%)

Query: 1  MRKFLLALALLSIPLSSGAFAQQQTRG-TPDEQKACTRDVQRHCRAVIDQGDFTILACLQ 59
          M K LLA  LL +  + GAFAQ   RG TPDEQKAC  DV RHCR+V+++GDF IL CLQ
Sbjct: 1  MFKALLATTLL-VSATVGAFAQAPQRGGTPDEQKACAPDVSRHCRSVMNEGDFVILGCLQ 59

Query: 60 QNRTKISAACDQVLKTHGQ 78
           +R KIS  CD VLK+HGQ
Sbjct: 60 AHRAKISKRCDAVLKSHGQ 78


>ref|YP_531594.1| hypothetical protein RPC_1716 [Rhodopseudomonas palustris BisB18]
 gb|ABD87275.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 77

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)

Query: 1  MRKFLLALALLSIPLSSGAFAQQQTRGTPDEQKACTRDVQRHCRAVIDQGDFTILACLQQ 60
          M K +LAL LL + +SS A AQQQ  GT  EQ+AC+RDV R CR ++DQGDF ILACL++
Sbjct: 1  MPKIILALTLLLVAISS-ADAQQQRSGTKQEQEACSRDVSRFCRPLMDQGDFVILACLKE 59

Query: 61 NRTKISAACDQVLKTHGQ 78
          NR K++ AC+QVL  HGQ
Sbjct: 60 NRPKLTKACNQVLLNHGQ 77