BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0056.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_485342.1| squalene/phytoene synthase [Rhodopseudomonas pa... 478 e-133 ref|YP_570700.1| squalene/phytoene synthase [Rhodopseudomonas pa... 475 e-132 ref|NP_769641.1| hypothetical protein blr3001 [Bradyrhizobium ja... 475 e-132 emb|CAA60247.1| unknown [Bradyrhizobium japonicum] 469 e-130 ref|YP_001204682.1| putative phytoene synthase [Bradyrhizobium s... 466 e-129 >ref|YP_485342.1| squalene/phytoene synthase [Rhodopseudomonas palustris HaA2] gb|ABD06431.1| Squalene/phytoene synthase [Rhodopseudomonas palustris HaA2] Length = 292 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/292 (79%), Positives = 250/292 (85%) Query: 1 MTTASDLRSGKTHRDENFPVASWIIHPRHRALILAFYNFVRTADDIADHATLPAEEKLRY 60 MT+AS+LRSGKTHRDENFPVASWIIHPRHR LILAFYNFVRTADDIADHA L A KL Y Sbjct: 1 MTSASELRSGKTHRDENFPVASWIIHPRHRELILAFYNFVRTADDIADHAMLDAATKLDY 60 Query: 61 LDLMEAELLGNGDTQKEAVNLRRAFAERSMPPRHALDVLVAFRLDVTKLRYENWDDVIDY 120 LDL+EAELLG+G TQ EAV LRRA AER MPPRHALDVL+AFR+DVTKLRYE+WD+VI Y Sbjct: 61 LDLLEAELLGHGATQPEAVELRRALAERGMPPRHALDVLIAFRMDVTKLRYEDWDEVIHY 120 Query: 121 CRYSAMPVGRFMLDVHGEDTSTWAASDALCAGLQINNHLQDCGKDYRNLNRVYLPRDALA 180 CRYSAMPVGRFMLDVHGE TSTW ASDALCAGLQINNHLQDCGKDYRNLNRVYLPRDAL Sbjct: 121 CRYSAMPVGRFMLDVHGESTSTWPASDALCAGLQINNHLQDCGKDYRNLNRVYLPRDALD 180 Query: 181 AAGATVEMLGEAKSQPALLKCLQALAVRTEALLDQSKSLAAEVKDFRLGLEISVIQAFAD 240 AAGA VE LG S PALL+CLQ LAVRT+ LL + + LAAE+KDFRLGLE+SVIQAFAD Sbjct: 181 AAGAKVEDLGHLTSSPALLRCLQGLAVRTDVLLGEGRPLAAEIKDFRLGLEVSVIQAFAD 240 Query: 241 KIVNMLKVRDPLSERVHLSPVELLLQSLGGVAGETARRATGRRAVSKTAAGA 292 +IV MLKVRDPLSERVH P+E LL ++G V E ARR G+ VSK A A Sbjct: 241 RIVAMLKVRDPLSERVHPKPIEFLLSTIGAVGSEIARRTFGKGPVSKPAPRA 292 >ref|YP_570700.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisB5] gb|ABE40799.1| Squalene/phytoene synthase [Rhodopseudomonas palustris BisB5] Length = 292 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 228/292 (78%), Positives = 248/292 (84%) Query: 1 MTTASDLRSGKTHRDENFPVASWIIHPRHRALILAFYNFVRTADDIADHATLPAEEKLRY 60 MT+AS+LRSGKTHRDENFPVASWIIHPRHR LILAFYNFVRTADDIADHA L A KL Y Sbjct: 1 MTSASELRSGKTHRDENFPVASWIIHPRHRDLILAFYNFVRTADDIADHAMLDAPTKLSY 60 Query: 61 LDLMEAELLGNGDTQKEAVNLRRAFAERSMPPRHALDVLVAFRLDVTKLRYENWDDVIDY 120 LDL+EAELLG G+TQ EAVNLRRA AER MPPRHALDVL+AFR+DVTKLRYE+WD+VI Y Sbjct: 61 LDLLEAELLGRGETQPEAVNLRRALAERGMPPRHALDVLIAFRMDVTKLRYEDWDEVIHY 120 Query: 121 CRYSAMPVGRFMLDVHGEDTSTWAASDALCAGLQINNHLQDCGKDYRNLNRVYLPRDALA 180 CRYSAMPVGRFMLDVHGE TSTW ASDALCAGLQ+NNHLQDCGKDYRNLNRVYLPRDAL Sbjct: 121 CRYSAMPVGRFMLDVHGESTSTWPASDALCAGLQVNNHLQDCGKDYRNLNRVYLPRDALD 180 Query: 181 AAGATVEMLGEAKSQPALLKCLQALAVRTEALLDQSKSLAAEVKDFRLGLEISVIQAFAD 240 A GA VE LG+ KS PALL CLQ+LA RT+ LL + + LAAEVKDFRLGLE+SVIQAFAD Sbjct: 181 AVGAQVEELGQLKSSPALLHCLQSLAARTDVLLGEGRPLAAEVKDFRLGLEVSVIQAFAD 240 Query: 241 KIVNMLKVRDPLSERVHLSPVELLLQSLGGVAGETARRATGRRAVSKTAAGA 292 +IV MLKVRDPLSERVHL P+E L ++G V E RR + VS A A Sbjct: 241 RIVRMLKVRDPLSERVHLKPIEFLFSTIGAVGSEITRRTFRKGPVSNPAPRA 292 >ref|NP_769641.1| hypothetical protein blr3001 [Bradyrhizobium japonicum USDA 110] dbj|BAC48266.1| blr3001 [Bradyrhizobium japonicum USDA 110] Length = 322 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 224/287 (78%), Positives = 255/287 (88%) Query: 1 MTTASDLRSGKTHRDENFPVASWIIHPRHRALILAFYNFVRTADDIADHATLPAEEKLRY 60 MT+AS+LRSGK RDENFPVASWIIHPRHRALILA+YNFVRTADDIADHATLP ++KL Y Sbjct: 29 MTSASELRSGKGDRDENFPVASWIIHPRHRALILAYYNFVRTADDIADHATLPGDQKLAY 88 Query: 61 LDLMEAELLGNGDTQKEAVNLRRAFAERSMPPRHALDVLVAFRLDVTKLRYENWDDVIDY 120 LDL+EAELLG GDTQ EAV LRRA AER M PRHALDVL+AFR+DVTKLRYENWD+VI Y Sbjct: 89 LDLLEAELLGKGDTQAEAVVLRRALAERGMAPRHALDVLIAFRMDVTKLRYENWDEVIHY 148 Query: 121 CRYSAMPVGRFMLDVHGEDTSTWAASDALCAGLQINNHLQDCGKDYRNLNRVYLPRDALA 180 CRYSAMPVGRFMLDVHGE TSTWAASDALCA LQINNHLQDCGKD+R LNRVYLPRDALA Sbjct: 149 CRYSAMPVGRFMLDVHGESTSTWAASDALCAALQINNHLQDCGKDFRELNRVYLPRDALA 208 Query: 181 AAGATVEMLGEAKSQPALLKCLQALAVRTEALLDQSKSLAAEVKDFRLGLEISVIQAFAD 240 A+GA+VE LG A+S PA+L CLQ+LAVR EALLD+ +SL AE++DFRLG++++VIQA+AD Sbjct: 209 ASGASVEQLGLAQSPPAMLACLQSLAVRNEALLDEGRSLTAEIRDFRLGIDVAVIQAYAD 268 Query: 241 KIVNMLKVRDPLSERVHLSPVELLLQSLGGVAGETARRATGRRAVSK 287 +IV +LKVRDPL ERVHL+ ELL SL G+ GE RRA GR+A+S+ Sbjct: 269 RIVRLLKVRDPLRERVHLNKFELLTFSLAGMIGEVGRRAIGRKAISR 315 >emb|CAA60247.1| unknown [Bradyrhizobium japonicum] Length = 294 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 222/287 (77%), Positives = 253/287 (88%) Query: 1 MTTASDLRSGKTHRDENFPVASWIIHPRHRALILAFYNFVRTADDIADHATLPAEEKLRY 60 MT+AS+LRSGK RDENFPVASWIIHPRHRALILA+YNFVRTADDIADHATLP ++KL Y Sbjct: 1 MTSASELRSGKGDRDENFPVASWIIHPRHRALILAYYNFVRTADDIADHATLPGDQKLAY 60 Query: 61 LDLMEAELLGNGDTQKEAVNLRRAFAERSMPPRHALDVLVAFRLDVTKLRYENWDDVIDY 120 LDL+EAELLG GDTQ EAV LRRA AE M PRHALDVL+AFR+DVTKLRYENWD+VI Y Sbjct: 61 LDLLEAELLGKGDTQAEAVVLRRALAEAGMAPRHALDVLIAFRMDVTKLRYENWDEVIHY 120 Query: 121 CRYSAMPVGRFMLDVHGEDTSTWAASDALCAGLQINNHLQDCGKDYRNLNRVYLPRDALA 180 CRYSAMPVGRFMLDVHGE TSTWAASD LCA LQINNHLQDCGKD+R LNRVYLPRDALA Sbjct: 121 CRYSAMPVGRFMLDVHGESTSTWAASDPLCAALQINNHLQDCGKDFRELNRVYLPRDALA 180 Query: 181 AAGATVEMLGEAKSQPALLKCLQALAVRTEALLDQSKSLAAEVKDFRLGLEISVIQAFAD 240 A+GA+VE LG A+S PA+L CLQ+LAVR EALLD+ +SL AE++DFRLG++++VIQA+AD Sbjct: 181 ASGASVEQLGLAQSPPAMLACLQSLAVRNEALLDEGRSLTAEIRDFRLGIDVAVIQAYAD 240 Query: 241 KIVNMLKVRDPLSERVHLSPVELLLQSLGGVAGETARRATGRRAVSK 287 +IV +LKVRDPL ERVHL+ ELL SL G+ GE RRA GR+A+S+ Sbjct: 241 RIVRLLKVRDPLRERVHLNKFELLTFSLAGMIGEVGRRAIGRKAISR 287 >ref|YP_001204682.1| putative phytoene synthase [Bradyrhizobium sp. ORS 278] emb|CAL76445.1| putative phytoene synthase [Bradyrhizobium sp. ORS 278] Length = 291 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 223/290 (76%), Positives = 246/290 (84%) Query: 1 MTTASDLRSGKTHRDENFPVASWIIHPRHRALILAFYNFVRTADDIADHATLPAEEKLRY 60 MTTASDLRSGKTHRDENFPVASWII P HRALILAFYNFVRTADDIADH +LP EEKLR Sbjct: 1 MTTASDLRSGKTHRDENFPVASWIIRPEHRALILAFYNFVRTADDIADHPSLPGEEKLRL 60 Query: 61 LDLMEAELLGNGDTQKEAVNLRRAFAERSMPPRHALDVLVAFRLDVTKLRYENWDDVIDY 120 LDL+EAEL G G+TQ AV+LRRA AER MPPRHALD+LVAFR+DVTKLRYENWD+VI Y Sbjct: 61 LDLLEAELTGTGETQDVAVSLRRALAERGMPPRHALDLLVAFRMDVTKLRYENWDEVIHY 120 Query: 121 CRYSAMPVGRFMLDVHGEDTSTWAASDALCAGLQINNHLQDCGKDYRNLNRVYLPRDALA 180 CRYSAMPVGRFMLDVHGE T+TW ASDA+CAGLQINNHLQDCGKDY+ LNRVYLPRDALA Sbjct: 121 CRYSAMPVGRFMLDVHGESTATWPASDAICAGLQINNHLQDCGKDYKALNRVYLPRDALA 180 Query: 181 AAGATVEMLGEAKSQPALLKCLQALAVRTEALLDQSKSLAAEVKDFRLGLEISVIQAFAD 240 AGA VEMLGEAKS P LL CLQ LAVR ALL++ + L + VKDFR GLEI+VIQAFAD Sbjct: 181 EAGAAVEMLGEAKSSPQLLSCLQKLAVRNAALLEEGRDLNSGVKDFRFGLEIAVIQAFAD 240 Query: 241 KIVNMLKVRDPLSERVHLSPVELLLQSLGGVAGETARRATGRRAVSKTAA 290 +IV +L+VRDPLSERVHL+P +L + V GE ARR GR +K+A Sbjct: 241 RIVALLQVRDPLSERVHLTPAGMLGLTFTSVMGEIARRVAGRHPQTKSAG 290