BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0054.p (416 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769643.1| hypothetical protein blr3003 [Bradyrhizobium ja... 674 0.0 emb|CAA60249.1| unknown [Bradyrhizobium japonicum] 667 0.0 ref|NP_443762.1| flavoprotein oxidoreductase [Sinorhizobium fred... 651 0.0 ref|YP_531597.1| amine oxidase [Rhodopseudomonas palustris BisB1... 647 0.0 ref|YP_001238999.1| putative phytoene dehydrogenase [Bradyrhizob... 645 0.0 >ref|NP_769643.1| hypothetical protein blr3003 [Bradyrhizobium japonicum USDA 110] dbj|BAC48268.1| blr3003 [Bradyrhizobium japonicum USDA 110] Length = 418 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/414 (80%), Positives = 358/414 (86%) Query: 1 MQKTVHIIGAGISGLSAAVRLANGGYKVFVHEATQQAGGRCRSYFDAATSLTIDNGNHLL 60 MQ T HIIGAGISGLSAAVRLAN G+KV VHEAT QAGGRCRSYFD AT+LTIDNGNHLL Sbjct: 1 MQNTAHIIGAGISGLSAAVRLANAGFKVAVHEATHQAGGRCRSYFDGATNLTIDNGNHLL 60 Query: 61 LSGNRHALSYARAIGTEAGLVGPARAQFPFVDLASGRRWQLDLGDSRLPLWVFDEARRVP 120 LSGN HA +YAR+IGTEAGLVGP AQFPFVD+ +G+RWQ+DLG RLP WV DE+RRVP Sbjct: 61 LSGNSHARAYARSIGTEAGLVGPESAQFPFVDIKTGQRWQIDLGTGRLPTWVLDESRRVP 120 Query: 121 DTTLRDYLALAPLAWAGTGALVGNTIPCKGTLYDRLVQPLLLAALNVDPPEGSAGLAGAI 180 DT L DYL LAPL WA LVG +IP +G LY RLVQPLLLAALNVDPPEGSAGLAGAI Sbjct: 121 DTGLTDYLKLAPLIWASEETLVGKSIPTEGVLYQRLVQPLLLAALNVDPPEGSAGLAGAI 180 Query: 181 VRETLLAGGQACRPLIARDGLSSVLIEPAVKLLQERGHSVQFSHELRALGMANDRISELD 240 VRETLLAGGQACRPLIARDGLS+VLIEPAVK LQERGHSVQ HELRA ++ + L+ Sbjct: 181 VRETLLAGGQACRPLIARDGLSAVLIEPAVKFLQERGHSVQLGHELRAFVTSDGKAGALN 240 Query: 241 FGNGDKIALGADDAVVLAVPPRAAASLLPGLKTPTKFRAIVNAHFRVDPPRDAAPILGVV 300 FG D I L D VV+AVPPRAAASLLPGLKTPT+FRAIVNAHFR +PP + PILGV+ Sbjct: 241 FGGEDVIQLADGDVVVMAVPPRAAASLLPGLKTPTEFRAIVNAHFRFEPPPGSPPILGVI 300 Query: 301 GGLVEWLFAFPQRMSVTISNGDRLVDMPREELAQAIWQDICEASGVSGDLPPWQIVRERR 360 GG+VEWLFAFP R+SVTISNGDRLVDMPREELAQAIW D+CEA GVSG+LPPWQIVRERR Sbjct: 301 GGIVEWLFAFPNRLSVTISNGDRLVDMPREELAQAIWNDVCEAGGVSGELPPWQIVRERR 360 Query: 361 ATFEATPEQNALRPGPTTAQKNLFLAGDWTATGLPATIEGSVRSGDRAADLVLA 414 ATF ATP QNALRPGP TA KNLFLAGDWTATGLPATIEGSVRSGDRAADLVLA Sbjct: 361 ATFAATPAQNALRPGPVTALKNLFLAGDWTATGLPATIEGSVRSGDRAADLVLA 414 >emb|CAA60249.1| unknown [Bradyrhizobium japonicum] Length = 439 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/415 (79%), Positives = 355/415 (85%) Query: 1 MQKTVHIIGAGISGLSAAVRLANGGYKVFVHEATQQAGGRCRSYFDAATSLTIDNGNHLL 60 MQ T HIIGAGISGLS AVRLAN G+KV VHEAT QAGGRCRSYFD AT+LTIDNGNHLL Sbjct: 1 MQNTAHIIGAGISGLSGAVRLANAGFKVAVHEATHQAGGRCRSYFDGATNLTIDNGNHLL 60 Query: 61 LSGNRHALSYARAIGTEAGLVGPARAQFPFVDLASGRRWQLDLGDSRLPLWVFDEARRVP 120 LSGN HA +YAR+IGTEAGLVGP AQFPFVD+ +G+RWQ+DLG RLP WV DE+RRVP Sbjct: 61 LSGNSHARAYARSIGTEAGLVGPESAQFPFVDIKTGQRWQIDLGTGRLPTWVLDESRRVP 120 Query: 121 DTTLRDYLALAPLAWAGTGALVGNTIPCKGTLYDRLVQPLLLAALNVDPPEGSAGLAGAI 180 DT L DYL LAPL WA LVG +IP +G LY RLVQPLLLAALNVDPPEGSAGLAGAI Sbjct: 121 DTGLTDYLKLAPLIWASEETLVGKSIPTEGVLYQRLVQPLLLAALNVDPPEGSAGLAGAI 180 Query: 181 VRETLLAGGQACRPLIARDGLSSVLIEPAVKLLQERGHSVQFSHELRALGMANDRISELD 240 VRETLLAGGQACRPLIARDGLS+VLIE AVK LQERGHSVQ HELRA ++ + L+ Sbjct: 181 VRETLLAGGQACRPLIARDGLSAVLIEXAVKFLQERGHSVQLGHELRAFVTSDGKAGALN 240 Query: 241 FGNGDKIALGADDAVVLAVPPRAAASLLPGLKTPTKFRAIVNAHFRVDPPRDAAPILGVV 300 FG D I L D VV+AVPPRAAASLLPGLKTPT+FRAIVNAHFR +PP + PILGV+ Sbjct: 241 FGGEDVIQLADGDVVVMAVPPRAAASLLPGLKTPTEFRAIVNAHFRFEPPPGSPPILGVI 300 Query: 301 GGLVEWLFAFPQRMSVTISNGDRLVDMPREELAQAIWQDICEASGVSGDLPPWQIVRERR 360 GG+VEWLFAFP R+SVTISNGDRLVDMPREELAQA W D+CEA GVSG+LPPWQIVRERR Sbjct: 301 GGIVEWLFAFPNRLSVTISNGDRLVDMPREELAQAFWNDVCEAGGVSGELPPWQIVRERR 360 Query: 361 ATFEATPEQNALRPGPTTAQKNLFLAGDWTATGLPATIEGSVRSGDRAADLVLAR 415 ATF ATP QNALRPGP TA KNLFLAGDWTATGLPATIEGSVRSGDRAADLVLA Sbjct: 361 ATFAATPAQNALRPGPVTALKNLFLAGDWTATGLPATIEGSVRSGDRAADLVLAH 415 >ref|NP_443762.1| flavoprotein oxidoreductase [Sinorhizobium fredii NGR234] sp|P55349.1|Y4AB_RHISN RecName: Full=Uncharacterized protein y4aB gb|AAB91600.1| putative flavoprotein oxidoreductase [Sinorhizobium fredii NGR234] Length = 417 Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/414 (76%), Positives = 367/414 (88%), Gaps = 1/414 (0%) Query: 1 MQKTVHIIGAGISGLSAAVRLANGGYKVFVHEATQQAGGRCRSYFDAATSLTIDNGNHLL 60 M K VHIIGAGISGLSAAV+L+N G V V+EATQQAGGRCRS+FD+AT+LTIDNGNHL+ Sbjct: 1 MPKNVHIIGAGISGLSAAVQLSNAGLPVHVYEATQQAGGRCRSFFDSATNLTIDNGNHLV 60 Query: 61 LSGNRHALSYARAIGTEAGLVGPARAQFPFVDLASGRRWQLDLGDSRLPLWVFDEARRVP 120 LSGN++ +YARAIGTE+GLVGP A+FPFVD+++ +RWQ+DLG RLP WVF +ARRVP Sbjct: 61 LSGNQYVRNYARAIGTESGLVGPTSAKFPFVDISTVQRWQVDLGGGRLPTWVFHKARRVP 120 Query: 121 DTTLRDYLALAPLAWAGTGALVGNTIPCKGTLYDRLVQPLLLAALNVDPPEGSAGLAGAI 180 DT L DYL LAP+ WAG LVGNTIPC GTLY RLV+PLLLAALN DPPEGSAGLAGAI Sbjct: 121 DTRLWDYLKLAPILWAGADELVGNTIPCNGTLYRRLVRPLLLAALNCDPPEGSAGLAGAI 180 Query: 181 VRETLLAGGQACRPLIARDGLSSVLIEPAVKLLQERGHSVQFSHELRALGMANDRISELD 240 VRETLLAGG+ACRPL+ARDGLS+VL+EPAVKLL+ RG +V+ SH+LR L + + ISELD Sbjct: 181 VRETLLAGGEACRPLVARDGLSAVLVEPAVKLLERRGATVRLSHKLRKLAKSAEIISELD 240 Query: 241 FGNGDKIALGADDAVVLAVPPRAAASLLPGLKTPTKFRAIVNAHFRVDPPRDAAPILGVV 300 FG+ DKIA+G DDAV+LAVPPRAAA+LLPGLKTPT+FRA+VNAHFR DPP A PILGVV Sbjct: 241 FGD-DKIAVGPDDAVILAVPPRAAATLLPGLKTPTEFRAVVNAHFRFDPPVGADPILGVV 299 Query: 301 GGLVEWLFAFPQRMSVTISNGDRLVDMPREELAQAIWQDICEASGVSGDLPPWQIVRERR 360 GGLVEWLFA+PQR+SVTISNGDRL+D+PREE+ + IW+D+CEA G+SG+LPPWQIV ERR Sbjct: 300 GGLVEWLFAYPQRLSVTISNGDRLLDIPREEVVRVIWRDVCEAGGISGELPPWQIVCERR 359 Query: 361 ATFEATPEQNALRPGPTTAQKNLFLAGDWTATGLPATIEGSVRSGDRAADLVLA 414 ATF+ATPEQNALRPGP T KNLFLAGDWTATGLPATIEGSVRSG+RAADL L+ Sbjct: 360 ATFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGSVRSGNRAADLALS 413 >ref|YP_531597.1| amine oxidase [Rhodopseudomonas palustris BisB18] gb|ABD87278.1| amine oxidase [Rhodopseudomonas palustris BisB18] Length = 418 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/414 (78%), Positives = 356/414 (85%), Gaps = 1/414 (0%) Query: 1 MQKTVHIIGAGISGLSAAVRLANGGYKVFVHEATQQAGGRCRSYFDAATSLTIDNGNHLL 60 M TVHIIGAGISGLSAA+RLA GY+V VHEA QQAGGRCRSYFDAAT LTIDNGNHLL Sbjct: 1 MPNTVHIIGAGISGLSAAIRLAKAGYQVHVHEAMQQAGGRCRSYFDAATGLTIDNGNHLL 60 Query: 61 LSGNRHALSYARAIGTEAGLVGPARAQFPFVDLASGRRWQLDLGDSRLPLWVFDEARRVP 120 LSGN A+ YAR+IGTEAGLVGPA AQFPFVDLA+ +RW L LGD RLPLWV D+ARRVP Sbjct: 61 LSGNSAAVGYARSIGTEAGLVGPATAQFPFVDLANDQRWTLQLGDGRLPLWVLDDARRVP 120 Query: 121 DTTLRDYLALAPLAWAGTGALVGNTIPCKGTLYDRLVQPLLLAALNVDPPEGSAGLAGAI 180 TTLRDYLAL PL WA T LVG+ I C+GTLY LVQPLLLAALNVDPPEGSAGLAGA+ Sbjct: 121 GTTLRDYLALMPLIWAPTSRLVGDAIRCEGTLYRNLVQPLLLAALNVDPPEGSAGLAGAV 180 Query: 181 VRETLLAGGQACRPLIARDGLSSVLIEPAVKLLQERGHSVQFSHELRALGMANDRISELD 240 VRETLLAGG+ACRPLIARDGLS+VL+EPAV+LL+ G SVQF HELR L MA+++IS LD Sbjct: 181 VRETLLAGGKACRPLIARDGLSAVLVEPAVELLRSSGASVQFGHELRKLTMADNKISALD 240 Query: 241 FGNGDKIALGADDAVVLAVPPRAAASLLPGLKTPTKFRAIVNAHFRVDPPRDAAPILGVV 300 FG+ D +ALG DDAVVLAVPPR AASLLPGLKTP K+RAIVNAHF PP P++GVV Sbjct: 241 FGD-DSVALGPDDAVVLAVPPRPAASLLPGLKTPGKYRAIVNAHFNYAPPHGQPPLVGVV 299 Query: 301 GGLVEWLFAFPQRMSVTISNGDRLVDMPREELAQAIWQDICEASGVSGDLPPWQIVRERR 360 GGLVEWLFAFP R+SVTISNGDRLV++PRE+LAQ IWQ+IC +G+ DLPPWQIVRERR Sbjct: 300 GGLVEWLFAFPNRLSVTISNGDRLVELPREQLAQQIWQEICTLTGIVADLPPWQIVRERR 359 Query: 361 ATFEATPEQNALRPGPTTAQKNLFLAGDWTATGLPATIEGSVRSGDRAADLVLA 414 ATFEATPEQNALRPG TA NL LAGDWT TGLPATIEGSVRSG+RAA+LV A Sbjct: 360 ATFEATPEQNALRPGAITAWNNLVLAGDWTDTGLPATIEGSVRSGNRAAELVQA 413 >ref|YP_001238999.1| putative phytoene dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ35093.1| putative phytoene dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 416 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/415 (76%), Positives = 352/415 (84%) Query: 1 MQKTVHIIGAGISGLSAAVRLANGGYKVFVHEATQQAGGRCRSYFDAATSLTIDNGNHLL 60 M K HIIGAGISGLSA VRLAN GY V VHEATQQ GGRCRSY+DAAT L IDNGNHLL Sbjct: 1 MNKIAHIIGAGISGLSAGVRLANAGYTVHVHEATQQLGGRCRSYYDAATDLVIDNGNHLL 60 Query: 61 LSGNRHALSYARAIGTEAGLVGPARAQFPFVDLASGRRWQLDLGDSRLPLWVFDEARRVP 120 LS N H L+YAR IG+EAGLVGP AQF FVD+ +G+RW LDLG RLPLWVFDE+RRVP Sbjct: 61 LSANHHVLAYARVIGSEAGLVGPKEAQFAFVDIRTGQRWLLDLGSGRLPLWVFDESRRVP 120 Query: 121 DTTLRDYLALAPLAWAGTGALVGNTIPCKGTLYDRLVQPLLLAALNVDPPEGSAGLAGAI 180 DTTL DYLAL+PL WAGT +G+TIPCKGTLYDRLVQPLLLAALN DPPEGSAGLAGAI Sbjct: 121 DTTLGDYLALSPLIWAGTAKTIGDTIPCKGTLYDRLVQPLLLAALNCDPPEGSAGLAGAI 180 Query: 181 VRETLLAGGQACRPLIARDGLSSVLIEPAVKLLQERGHSVQFSHELRALGMANDRISELD 240 VRETLLAGGQACRPLIARDGLS VLI+PAVK L+ +G SV+ ELR+L A R++ L Sbjct: 181 VRETLLAGGQACRPLIARDGLSGVLIDPAVKFLEGKGGSVRIGRELRSLDQAAGRVTGLR 240 Query: 241 FGNGDKIALGADDAVVLAVPPRAAASLLPGLKTPTKFRAIVNAHFRVDPPRDAAPILGVV 300 FG + +ALG DD VVLAVPPR A +LLPGL PTKFRAIVNAHFR+ PP+ A +LGVV Sbjct: 241 FGGDETVALGPDDVVVLAVPPRPAMALLPGLTGPTKFRAIVNAHFRITPPKGAPALLGVV 300 Query: 301 GGLVEWLFAFPQRMSVTISNGDRLVDMPREELAQAIWQDICEASGVSGDLPPWQIVRERR 360 GGLVEWLFAFP+R+SVTISNGDRLVDMPRE+LA AIW D+C+A+G+S +LPPWQIVRERR Sbjct: 301 GGLVEWLFAFPERLSVTISNGDRLVDMPREQLAAAIWADVCKAAGISAELPPWQIVRERR 360 Query: 361 ATFEATPEQNALRPGPTTAQKNLFLAGDWTATGLPATIEGSVRSGDRAADLVLAR 415 ATFEATPEQNALRPG T+ NL LAGDWT TGLPATIEGSVRSGDRAADL+L + Sbjct: 361 ATFEATPEQNALRPGVKTSFANLALAGDWTDTGLPATIEGSVRSGDRAADLLLGK 415