BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0051.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02461848.1| transcriptional regulator acrR family protein... 204 6e-51 ref|YP_004687722.1| TetR family transcriptional regulator [Cupri... 154 1e-35 ref|ZP_01306715.1| Transcriptional regulator [Oceanobacter sp. R... 150 1e-34 ref|YP_002499175.1| TetR family transcriptional regulator [Methy... 149 3e-34 ref|YP_002026587.1| TetR family transcriptional regulator [Steno... 143 2e-32 >ref|ZP_02461848.1| transcriptional regulator acrR family protein [Burkholderia thailandensis MSMB43] Length = 230 Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 104/179 (58%), Positives = 131/179 (73%) Query: 10 QLVETKARILDAAREAVALSGWKDAQIALIASRAGVATGSVYRYFDSKADLYAQVLALVS 69 +L + +A+ILDAAR VA GW+ AQ++ +A AG+ATGSVYRYF SKADL+AQVLA+VS Sbjct: 21 RLADNRAQILDAARRLVAEGGWQAAQMSSVAHAAGLATGSVYRYFPSKADLFAQVLAIVS 80 Query: 70 EREVAVVAAIVEAEGSASQCLVDAIYTFAVRAMRGRRLAYALIAEPCEPEIDAARLKYRA 129 +REV VV I A G L DA+Y F+ RA+RGRRLA+ALIAEPCEPEID RL YR Sbjct: 81 QREVDVVRQIAAAGGLVRDRLADAVYAFSKRALRGRRLAFALIAEPCEPEIDVQRLAYRK 140 Query: 130 ALADQIARLVRRGIAGGEFVEIDANVAASCVTGAFMEALVGPLAPEAAPDSDAAKAIAQ 188 AL++ + R++ GI GEF E DA +A+CV GAFMEALVGPLAP+ +D A+ + Sbjct: 141 ALSEAVQRIIEEGIRSGEFPEQDARTSAACVVGAFMEALVGPLAPDEEHKTDEAEFLGH 199 >ref|YP_004687722.1| TetR family transcriptional regulator [Cupriavidus necator N-1] gb|AEI81684.1| transcriptional regulator TetR family [Cupriavidus necator N-1] Length = 214 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 80/160 (50%), Positives = 109/160 (68%) Query: 18 ILDAAREAVALSGWKDAQIALIASRAGVATGSVYRYFDSKADLYAQVLALVSEREVAVVA 77 IL AAR +A SG+++AQ+ IA AG+A G++YRYF SK +L +V+ ++REV VVA Sbjct: 23 ILKAARTLIAQSGFREAQMTAIAEAAGLAIGTLYRYFPSKTELLVEVVKFTAQREVDVVA 82 Query: 78 AIVEAEGSASQCLVDAIYTFAVRAMRGRRLAYALIAEPCEPEIDAARLKYRAALADQIAR 137 I +G+A L A +TFA RA+RGRRLA+AL+AEP EPE++AARL Y AL+ Sbjct: 83 GIAMRDGTACDRLGIAAWTFASRALRGRRLAHALVAEPVEPEVEAARLTYHRALSRVFRT 142 Query: 138 LVRRGIAGGEFVEIDANVAASCVTGAFMEALVGPLAPEAA 177 ++ +GIA GEF E D+ +A C+ G E LV PL+ EAA Sbjct: 143 IIEQGIAAGEFPEQDSTASADCIVGCLFEGLVAPLSSEAA 182 >ref|ZP_01306715.1| Transcriptional regulator [Oceanobacter sp. RED65] gb|EAT12730.1| Transcriptional regulator [Oceanobacter sp. RED65] Length = 217 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/163 (46%), Positives = 109/163 (66%) Query: 14 TKARILDAAREAVALSGWKDAQIALIASRAGVATGSVYRYFDSKADLYAQVLALVSEREV 73 T+ARIL AR+ V G+ A +A +A R+G+ATG++YR+F SKA+L A+V +E E+ Sbjct: 16 TRARILKEARQLVTEGGFMAAAVAPVAKRSGIATGTIYRHFPSKAELVAEVFRHATEHEL 75 Query: 74 AVVAAIVEAEGSASQCLVDAIYTFAVRAMRGRRLAYALIAEPCEPEIDAARLKYRAALAD 133 V A +++G+A Q L+ AI TFA+RA++ RLAYALIAEP +P ++ RL YR A A Sbjct: 76 QAVTAETQSDGTAQQRLIKAIETFALRALQAPRLAYALIAEPVDPLVEKERLSYRFAYAQ 135 Query: 134 QIARLVRRGIAGGEFVEIDANVAASCVTGAFMEALVGPLAPEA 176 L+ G+ EFV +A++ ++ + G EALVGPLAPEA Sbjct: 136 AFEDLINEGMEQNEFVPQNASITSAALVGMLAEALVGPLAPEA 178 >ref|YP_002499175.1| TetR family transcriptional regulator [Methylobacterium nodulans ORS 2060] gb|ACL58872.1| transcriptional regulator, TetR family [Methylobacterium nodulans ORS 2060] Length = 216 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 86/190 (45%), Positives = 124/190 (65%), Gaps = 5/190 (2%) Query: 13 ETKARILDAAREAVALSGWKDAQIALIASRAGVATGSVYRYFDSKADLYAQVLALVSERE 72 E + +IL AARE V+ G+++AQ++ +A AGVA G++YR+F SK L V++ VS+RE Sbjct: 19 EKRLQILRAARELVSSVGFREAQMSAVADAAGVALGTLYRHFPSKTVLMVDVVSEVSQRE 78 Query: 73 VAVVAAIVEAEGSASQCLVDAIYTFAVRAMRGRRLAYALIAEPCEPEIDAARLKYRAALA 132 V V A + EG A+ L + + FA RA+RGRRLA+AL+AEP EPEI++ARLKYR LA Sbjct: 79 VDVAAGVAMGEGDAADRLSASAWLFASRALRGRRLAHALVAEPVEPEIESARLKYRRKLA 138 Query: 133 DQIARLVRRGIAGGEFVEIDANVAASCVTGAFMEALVGPLAPEA-APDS---DAAKAIAQ 188 ++ +G+ G F D +A+C+ G+ E LVGPLA + + DS D AK+I + Sbjct: 139 RVFETIIEQGVRDGTFPPQDIQASAACIVGSIFEGLVGPLASDDLSTDSERRDHAKSIIE 198 Query: 189 -SIAGLSARM 197 + G+S RM Sbjct: 199 FCLRGVSGRM 208 >ref|YP_002026587.1| TetR family transcriptional regulator [Stenotrophomonas maltophilia R551-3] gb|ACF49904.1| transcriptional regulator, TetR family [Stenotrophomonas maltophilia R551-3] Length = 202 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 81/176 (46%), Positives = 110/176 (62%), Gaps = 2/176 (1%) Query: 9 NQLVETKARILDAAREAVALSGWKDAQIALIASRAGVATGSVYRYFDSKADLYAQVLALV 68 +L + RIL A RE VA GW++A + +A++AGV+TG +YR+F SKA+L+ +VL Sbjct: 11 ERLAGVRERILLATRERVAAGGWRNAPVTAVATQAGVSTGLIYRHFPSKAELFVEVLNAA 70 Query: 69 SEREVAVVAAIVEAEGSASQCLVDAIYTFAVRAMRGRRLAYALIAEPCEPEIDAARLKYR 128 EVA++ I AS+ L AI F RA+ G LA+A I EP +PE++A R++ R Sbjct: 71 VAHEVAIMERIASGPEVASERLRLAITAFVRRALAGPGLAHAFIVEPVDPEVEAERMRGR 130 Query: 129 AALADQIARLVRRGIAGGEFVEIDANVAASCVTGAFMEALVGPLAP--EAAPDSDA 182 A D RLV G+A GE DA+VAA+C+ GAF EA+VGP AP EA D DA Sbjct: 131 RAFGDVFLRLVEEGVAAGELPAQDAHVAAACLVGAFTEAMVGPTAPSREAHRDEDA 186