BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0047.p (386 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769646.1| hypothetical protein bll3006 [Bradyrhizobium ja... 766 0.0 ref|YP_570695.1| radical SAM family protein [Rhodopseudomonas pa... 752 0.0 ref|YP_001239001.1| hypothetical protein BBta_2971 [Bradyrhizobi... 744 0.0 ref|YP_531603.1| radical SAM family protein [Rhodopseudomonas pa... 739 0.0 ref|YP_001204686.1| hypothetical protein BRADO2631 [Bradyrhizobi... 738 0.0 >ref|NP_769646.1| hypothetical protein bll3006 [Bradyrhizobium japonicum USDA 110] dbj|BAC48271.1| bll3006 [Bradyrhizobium japonicum USDA 110] Length = 386 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/386 (95%), Positives = 378/386 (97%) Query: 1 MAIPFFKEMRIGGYLIKQKLLGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT 60 MAIPFFKEMRIGGYL+KQKLLGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT Sbjct: 1 MAIPFFKEMRIGGYLLKQKLLGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT 60 Query: 61 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE 120 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE Sbjct: 61 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE 120 Query: 121 PSPYLFFSVHLDGLKDHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFDGHPAEEI 180 PSPYLFFSVHLDGLKDHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFDGHPAEEI Sbjct: 121 PSPYLFFSVHLDGLKDHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFDGHPAEEI 180 Query: 181 AKFLDFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL 240 AKFLD T ELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFA+GKGKKWNFMHSGL Sbjct: 181 AKFLDLTVELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFAMGKGKKWNFMHSGL 240 Query: 241 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGYAKTFKELMDTTDWDTYGTGKYEK 300 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGYAKTFKELMDTTDW+TYGTGKYEK Sbjct: 241 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGYAKTFKELMDTTDWETYGTGKYEK 300 Query: 301 CADCMAHCGYEPTAATAAINNPLKAMWVALRGIRTSGPMAPEIDMSKQRPAQYIFAEQVQ 360 CADCMAHCGYEPTAATAA+NNPLKAMWV+LRG++TSGPMAPEIDMSKQRPAQYIF+EQVQ Sbjct: 301 CADCMAHCGYEPTAATAALNNPLKAMWVSLRGVKTSGPMAPEIDMSKQRPAQYIFSEQVQ 360 Query: 361 KKLSEIRRDEAAAAAAKQQAKTSTAA 386 KKLSEIR+DEAAAA K K STAA Sbjct: 361 KKLSEIRKDEAAAAQEKAARKASTAA 386 >ref|YP_570695.1| radical SAM family protein [Rhodopseudomonas palustris BisB5] gb|ABE40794.1| Radical SAM [Rhodopseudomonas palustris BisB5] Length = 386 Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/386 (92%), Positives = 371/386 (96%) Query: 1 MAIPFFKEMRIGGYLIKQKLLGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT 60 MAIPF KE+RIGGYL+KQKLLGRK YPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRM+ Sbjct: 1 MAIPFHKEIRIGGYLLKQKLLGRKHYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMS 60 Query: 61 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE 120 AQECWDAA+ECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKL LFE Sbjct: 61 AQECWDAAEECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLHLFE 120 Query: 121 PSPYLFFSVHLDGLKDHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFDGHPAEEI 180 PSP+LFFSVHLDGLKDHHDKAVSQ GVFDRAVSAIKAAKA+GFTVNVNATIFD HPAEEI Sbjct: 121 PSPFLFFSVHLDGLKDHHDKAVSQAGVFDRAVSAIKAAKAKGFTVNVNATIFDNHPAEEI 180 Query: 181 AKFLDFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL 240 AKFLDFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL Sbjct: 181 AKFLDFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL 240 Query: 241 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGYAKTFKELMDTTDWDTYGTGKYEK 300 FLDFLAGNQE+ECTPWGMPARNIFGWQKPCYLLGEGY KTFKELM+TT+WD+YGTGKYEK Sbjct: 241 FLDFLAGNQEFECTPWGMPARNIFGWQKPCYLLGEGYTKTFKELMETTNWDSYGTGKYEK 300 Query: 301 CADCMAHCGYEPTAATAAINNPLKAMWVALRGIRTSGPMAPEIDMSKQRPAQYIFAEQVQ 360 CADCMAHCGYEPTAATA++NNPLKA WVALRGIRTSGPMAPEID+S QRPAQYIFAEQVQ Sbjct: 301 CADCMAHCGYEPTAATASLNNPLKAAWVALRGIRTSGPMAPEIDLSNQRPAQYIFAEQVQ 360 Query: 361 KKLSEIRRDEAAAAAAKQQAKTSTAA 386 K LSEIRRDEAAAA + + STAA Sbjct: 361 KTLSEIRRDEAAAANHGAKHEASTAA 386 >ref|YP_001239001.1| hypothetical protein BBta_2971 [Bradyrhizobium sp. BTAi1] gb|ABQ35095.1| hypothetical protein BBta_2971 [Bradyrhizobium sp. BTAi1] Length = 382 Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/386 (90%), Positives = 368/386 (95%), Gaps = 4/386 (1%) Query: 1 MAIPFFKEMRIGGYLIKQKLLGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT 60 MAIPF KE+RIG YL+KQKLLGRKRYPLVLMLEPLFRCNLAC GCGKIDYPDAILNRRMT Sbjct: 1 MAIPFHKELRIGAYLMKQKLLGRKRYPLVLMLEPLFRCNLACAGCGKIDYPDAILNRRMT 60 Query: 61 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE 120 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE Sbjct: 61 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE 120 Query: 121 PSPYLFFSVHLDGLKDHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFDGHPAEEI 180 PSPYLFFSVHLDGL++HHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFD HPAEEI Sbjct: 121 PSPYLFFSVHLDGLREHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFDNHPAEEI 180 Query: 181 AKFLDFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL 240 AKFLDFTTELGVGV+MSPGYAYERAPDQEHFLNRTKTK+LFRDVFALGKGKKWNFMHSGL Sbjct: 181 AKFLDFTTELGVGVTMSPGYAYERAPDQEHFLNRTKTKQLFRDVFALGKGKKWNFMHSGL 240 Query: 241 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGYAKTFKELMDTTDWDTYGTGKYEK 300 FLDFLAGNQE+ECTPWGMPARNIFGWQKPCYLLGEGY KTFKELM+TTDWD+YGTGKYEK Sbjct: 241 FLDFLAGNQEFECTPWGMPARNIFGWQKPCYLLGEGYTKTFKELMETTDWDSYGTGKYEK 300 Query: 301 CADCMAHCGYEPTAATAAINNPLKAMWVALRGIRTSGPMAPEIDMSKQRPAQYIFAEQVQ 360 CADCMAHCGYE TAA AA+ NPLKAMWV+LRGI+T GPMAPEID+SKQRPAQY+F+ +VQ Sbjct: 301 CADCMAHCGYEATAADAALTNPLKAMWVSLRGIKTEGPMAPEIDLSKQRPAQYVFSSEVQ 360 Query: 361 KKLSEIRRDEAAAAAAKQQAKTSTAA 386 K+LSEIRRDEA A Q K STAA Sbjct: 361 KRLSEIRRDEAIEA----QQKASTAA 382 >ref|YP_531603.1| radical SAM family protein [Rhodopseudomonas palustris BisB18] gb|ABD87284.1| Radical SAM [Rhodopseudomonas palustris BisB18] Length = 383 Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/386 (89%), Positives = 371/386 (96%), Gaps = 3/386 (0%) Query: 1 MAIPFFKEMRIGGYLIKQKLLGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT 60 MAIPFFKE+RIGGYLIKQK+LGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT Sbjct: 1 MAIPFFKELRIGGYLIKQKMLGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT 60 Query: 61 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE 120 AQECWDAA+ECGAPMVAIPGGEPLIHKEIGEIVRGLV RKKFVSLCTNALLLEKKL LFE Sbjct: 61 AQECWDAAEECGAPMVAIPGGEPLIHKEIGEIVRGLVERKKFVSLCTNALLLEKKLHLFE 120 Query: 121 PSPYLFFSVHLDGLKDHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFDGHPAEEI 180 PSPYLFFSVHLDG+K+HHDKAVSQ+GVFDRAVSAIKAAKA+GFTVNVNAT+FDGH A +I Sbjct: 121 PSPYLFFSVHLDGMKEHHDKAVSQEGVFDRAVSAIKAAKAKGFTVNVNATVFDGHSAADI 180 Query: 181 AKFLDFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL 240 AKF+DFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL Sbjct: 181 AKFMDFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL 240 Query: 241 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGYAKTFKELMDTTDWDTYGTGKYEK 300 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGY TFKELM+TTDWD+YGTGKYEK Sbjct: 241 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGYTATFKELMETTDWDSYGTGKYEK 300 Query: 301 CADCMAHCGYEPTAATAAINNPLKAMWVALRGIRTSGPMAPEIDMSKQRPAQYIFAEQVQ 360 CADCMAHCGYEPTAA A++ NPLKA+WV++RGIRT+GPMAPEID+SKQRPAQYI++ +VQ Sbjct: 301 CADCMAHCGYEPTAANASLVNPLKALWVSIRGIRTAGPMAPEIDLSKQRPAQYIYSSEVQ 360 Query: 361 KKLSEIRRDEAAAAAAKQQAKTSTAA 386 K+LSEIRRDEAA +Q++ S+AA Sbjct: 361 KRLSEIRRDEAAEV---KQSQASSAA 383 >ref|YP_001204686.1| hypothetical protein BRADO2631 [Bradyrhizobium sp. ORS 278] emb|CAL76449.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 382 Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/386 (89%), Positives = 368/386 (95%), Gaps = 4/386 (1%) Query: 1 MAIPFFKEMRIGGYLIKQKLLGRKRYPLVLMLEPLFRCNLACVGCGKIDYPDAILNRRMT 60 MAIPF KE+RIG YL+KQKLLGRKRYPLVLMLEPLFRCNLAC GCGKIDYPDAILNRRM+ Sbjct: 1 MAIPFHKELRIGAYLMKQKLLGRKRYPLVLMLEPLFRCNLACAGCGKIDYPDAILNRRMS 60 Query: 61 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE 120 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE Sbjct: 61 AQECWDAADECGAPMVAIPGGEPLIHKEIGEIVRGLVARKKFVSLCTNALLLEKKLDLFE 120 Query: 121 PSPYLFFSVHLDGLKDHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATIFDGHPAEEI 180 PSPYLFFSVHLDGL++HHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNAT+FDGHPAEEI Sbjct: 121 PSPYLFFSVHLDGLREHHDKAVSQKGVFDRAVSAIKAAKARGFTVNVNATVFDGHPAEEI 180 Query: 181 AKFLDFTTELGVGVSMSPGYAYERAPDQEHFLNRTKTKKLFRDVFALGKGKKWNFMHSGL 240 AKFLDFTTELGVGV+MSPGYAYERAPDQEHFLNRTKTK+LFRDVF LGKGKKWNFMHSGL Sbjct: 181 AKFLDFTTELGVGVTMSPGYAYERAPDQEHFLNRTKTKQLFRDVFKLGKGKKWNFMHSGL 240 Query: 241 FLDFLAGNQEYECTPWGMPARNIFGWQKPCYLLGEGYAKTFKELMDTTDWDTYGTGKYEK 300 FLDFLAGNQE+ECTPWGMPARNIFGWQKPCYLLGEGY KTFKELM+TTDWD+YGTGKYEK Sbjct: 241 FLDFLAGNQEFECTPWGMPARNIFGWQKPCYLLGEGYTKTFKELMETTDWDSYGTGKYEK 300 Query: 301 CADCMAHCGYEPTAATAAINNPLKAMWVALRGIRTSGPMAPEIDMSKQRPAQYIFAEQVQ 360 CADCMAHCGYE TAA AA++NP+KAM V+LRGIRT GPMAPEID+SKQRPAQY+F+ +VQ Sbjct: 301 CADCMAHCGYEATAANAALSNPIKAMAVSLRGIRTEGPMAPEIDLSKQRPAQYVFSSEVQ 360 Query: 361 KKLSEIRRDEAAAAAAKQQAKTSTAA 386 K+LSEIR+DEA A Q K STAA Sbjct: 361 KRLSEIRKDEAIEA----QQKASTAA 382