BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0046.p (375 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769647.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reduct... 564 e-159 ref|YP_318872.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reduct... 561 e-158 ref|YP_531604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reduct... 560 e-157 ref|ZP_01047647.1| 4-hydroxy-3-methylbut-2-enyl diphosphate redu... 558 e-157 ref|YP_001239002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate red... 558 e-157 >ref|NP_769647.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bradyrhizobium japonicum USDA 110] sp|Q89QW7.1|ISPH2_BRAJA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 dbj|BAC48272.1| penicillin tolerance protein [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 564 bits (1454), Expect = e-159, Method: Compositional matrix adjust. Identities = 277/307 (90%), Positives = 292/307 (95%) Query: 68 MEVFLAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNKHVVESLKKKGAIFVEDL 127 MEV+LAQPRGFCAGVVRAIEIVERALEK+GPPVYVRHEIVHNK+VVESLK KGAIFVE+L Sbjct: 1 MEVYLAQPRGFCAGVVRAIEIVERALEKFGPPVYVRHEIVHNKYVVESLKNKGAIFVEEL 60 Query: 128 SEVPAKAVTVFSAHGVARSVEEEAEARDLPVLNATCPLVTKVHNQGKRYISKGRALILIG 187 SEVP KAVTVFSAHGVARSVEEEA ARDLPVLNATCPLVTKVHNQGKRYI+KGR LILIG Sbjct: 61 SEVPPKAVTVFSAHGVARSVEEEAAARDLPVLNATCPLVTKVHNQGKRYITKGRTLILIG 120 Query: 188 HAGHPEVEGTMGQVPGPVLLVQSVQDVAELRLPSDAPVAYITQTTLSVDDTRDIIAALQA 247 HAGHPEVEGTMGQVP PVLLVQSV++V L LP+D PVAYITQTTLSVDDTRDII+ALQA Sbjct: 121 HAGHPEVEGTMGQVPAPVLLVQSVEEVNALTLPADTPVAYITQTTLSVDDTRDIISALQA 180 Query: 248 KFTDIQGPDIRDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTEVGVASY 307 +FTDIQGPDIRDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTE GVASY Sbjct: 181 RFTDIQGPDIRDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTEAGVASY 240 Query: 308 LIADGSELNPDWLKDAKAVGITAGASAPEVLVDDVIEALRRIRPVSVSVVPGREENIEFR 367 LIADGSELNP+WLKDA+ VG+TAGASAPEVLVDDVIEA+RRI PV V V+PGREENIEFR Sbjct: 241 LIADGSELNPEWLKDARTVGVTAGASAPEVLVDDVIEAMRRIGPVKVQVLPGREENIEFR 300 Query: 368 LPAELTA 374 LPAEL A Sbjct: 301 LPAELAA 307 >ref|YP_318872.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrobacter winogradskyi Nb-255] gb|ABA05520.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrobacter winogradskyi Nb-255] Length = 314 Score = 561 bits (1445), Expect = e-158, Method: Compositional matrix adjust. Identities = 277/313 (88%), Positives = 294/313 (93%) Query: 62 LRNGRPMEVFLAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNKHVVESLKKKGA 121 + + RP+EV LAQPRGFCAGVVRAIE VERALEKYGPPVYVRHEIVHNK+VVESLK KGA Sbjct: 1 MTDPRPIEVLLAQPRGFCAGVVRAIETVERALEKYGPPVYVRHEIVHNKYVVESLKNKGA 60 Query: 122 IFVEDLSEVPAKAVTVFSAHGVARSVEEEAEARDLPVLNATCPLVTKVHNQGKRYISKGR 181 IFVEDLSEVP KAVTVFSAHGVA+SVEEEA AR LPVLNATCPLVTKVHNQGKRY SKGR Sbjct: 61 IFVEDLSEVPPKAVTVFSAHGVAQSVEEEAAARGLPVLNATCPLVTKVHNQGKRYTSKGR 120 Query: 182 ALILIGHAGHPEVEGTMGQVPGPVLLVQSVQDVAELRLPSDAPVAYITQTTLSVDDTRDI 241 LILIGHAGHPEVEGTMGQVPGPVLLVQ+V DVA L LP+D PVAYITQTTLSVDDT+DI Sbjct: 121 TLILIGHAGHPEVEGTMGQVPGPVLLVQNVDDVAALTLPADTPVAYITQTTLSVDDTKDI 180 Query: 242 IAALQAKFTDIQGPDIRDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTE 301 I ALQ +FTDIQGPD RDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTE Sbjct: 181 IIALQQRFTDIQGPDTRDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTE 240 Query: 302 VGVASYLIADGSELNPDWLKDAKAVGITAGASAPEVLVDDVIEALRRIRPVSVSVVPGRE 361 VGVASYLIADGSELN +WL+ AKAVG+TAGASAPEVLVDDVIEAL+RIRPV+VSV+PGRE Sbjct: 241 VGVASYLIADGSELNAEWLEGAKAVGVTAGASAPEVLVDDVIEALKRIRPVAVSVLPGRE 300 Query: 362 ENIEFRLPAELTA 374 ENIEFRLP+ELT+ Sbjct: 301 ENIEFRLPSELTS 313 >ref|YP_531604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodopseudomonas palustris BisB18] gb|ABD87285.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodopseudomonas palustris BisB18] Length = 314 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 278/311 (89%), Positives = 292/311 (93%) Query: 62 LRNGRPMEVFLAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNKHVVESLKKKGA 121 + N RP+EVFLAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNK+VVESLK KGA Sbjct: 1 MYNVRPLEVFLAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNKYVVESLKAKGA 60 Query: 122 IFVEDLSEVPAKAVTVFSAHGVARSVEEEAEARDLPVLNATCPLVTKVHNQGKRYISKGR 181 IFVEDLSEVP +AVTVFSAHGVARSVEEEA AR LPVLNATCPLVTKVHNQGKRY+SKGR Sbjct: 61 IFVEDLSEVPPQAVTVFSAHGVARSVEEEAAARGLPVLNATCPLVTKVHNQGKRYMSKGR 120 Query: 182 ALILIGHAGHPEVEGTMGQVPGPVLLVQSVQDVAELRLPSDAPVAYITQTTLSVDDTRDI 241 ALILIGHAGHPEV GTMGQVPGPVLLVQ+V+DVA L LP+D PVAYITQTTLSVDDT+DI Sbjct: 121 ALILIGHAGHPEVVGTMGQVPGPVLLVQNVEDVAALTLPADTPVAYITQTTLSVDDTKDI 180 Query: 242 IAALQAKFTDIQGPDIRDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTE 301 IAAL +F+DIQGPDIRDICYATQNRQSAVRDLSKLVD+ILVVGA NSSNSNRLREIGTE Sbjct: 181 IAALAQRFSDIQGPDIRDICYATQNRQSAVRDLSKLVDLILVVGATNSSNSNRLREIGTE 240 Query: 302 VGVASYLIADGSELNPDWLKDAKAVGITAGASAPEVLVDDVIEALRRIRPVSVSVVPGRE 361 VG+ SYLIADGSELNPDWLK KAVGITAGASAPEVLVDDVIEALRRI PV VSV+PGRE Sbjct: 241 VGIPSYLIADGSELNPDWLKGVKAVGITAGASAPEVLVDDVIEALRRIGPVVVSVLPGRE 300 Query: 362 ENIEFRLPAEL 372 ENIEF LPAEL Sbjct: 301 ENIEFLLPAEL 311 >ref|ZP_01047647.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrobacter sp. Nb-311A] gb|EAQ34407.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrobacter sp. Nb-311A] Length = 308 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 279/307 (90%), Positives = 289/307 (94%) Query: 68 MEVFLAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNKHVVESLKKKGAIFVEDL 127 MEV LAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNK+VVESLK KGAIFVEDL Sbjct: 1 MEVLLAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNKYVVESLKNKGAIFVEDL 60 Query: 128 SEVPAKAVTVFSAHGVARSVEEEAEARDLPVLNATCPLVTKVHNQGKRYISKGRALILIG 187 SEVP KAVTVFSAHGVARSVEEEA AR LPVLNATCPLVTKVHNQGKRY SKGR LILIG Sbjct: 61 SEVPPKAVTVFSAHGVARSVEEEAFARGLPVLNATCPLVTKVHNQGKRYTSKGRTLILIG 120 Query: 188 HAGHPEVEGTMGQVPGPVLLVQSVQDVAELRLPSDAPVAYITQTTLSVDDTRDIIAALQA 247 HAGHPEVEGTMGQVPGPVLLVQ V DVA L LP+D PVAYITQTTLSVDDT+DII ALQ Sbjct: 121 HAGHPEVEGTMGQVPGPVLLVQDVDDVAALTLPADTPVAYITQTTLSVDDTKDIILALQQ 180 Query: 248 KFTDIQGPDIRDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTEVGVASY 307 +FTDIQGPD RDI YATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTEVGVASY Sbjct: 181 RFTDIQGPDTRDIRYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTEVGVASY 240 Query: 308 LIADGSELNPDWLKDAKAVGITAGASAPEVLVDDVIEALRRIRPVSVSVVPGREENIEFR 367 LIADGSELN +WLK AKAVGITAGASAPEVLVDDVIEAL+RIRPV+VSV+PGREENIEFR Sbjct: 241 LIADGSELNAEWLKGAKAVGITAGASAPEVLVDDVIEALKRIRPVAVSVLPGREENIEFR 300 Query: 368 LPAELTA 374 LP+ELT+ Sbjct: 301 LPSELTS 307 >ref|YP_001239002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bradyrhizobium sp. BTAi1] gb|ABQ35096.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bradyrhizobium sp. BTAi1] Length = 314 Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust. Identities = 276/314 (87%), Positives = 295/314 (93%) Query: 62 LRNGRPMEVFLAQPRGFCAGVVRAIEIVERALEKYGPPVYVRHEIVHNKHVVESLKKKGA 121 + + RP++++LAQPRGFCAGVVRAIEIVERALEKYG PVYVRHEIVHNK+VVESLK KGA Sbjct: 1 MTDRRPLQIYLAQPRGFCAGVVRAIEIVERALEKYGRPVYVRHEIVHNKYVVESLKAKGA 60 Query: 122 IFVEDLSEVPAKAVTVFSAHGVARSVEEEAEARDLPVLNATCPLVTKVHNQGKRYISKGR 181 IFVEDLSEVP +AVTVFSAHGVARSVEEEA AR LPVLNATCPLVTKVHNQGKRY+SKGR Sbjct: 61 IFVEDLSEVPPRAVTVFSAHGVARSVEEEAAARGLPVLNATCPLVTKVHNQGKRYMSKGR 120 Query: 182 ALILIGHAGHPEVEGTMGQVPGPVLLVQSVQDVAELRLPSDAPVAYITQTTLSVDDTRDI 241 L+LIGHAGHPEVEGTMGQVPGPV LVQ+V DVA L LPSD PVAYITQTTLSVDDT+DI Sbjct: 121 TLVLIGHAGHPEVEGTMGQVPGPVHLVQNVADVAALPLPSDTPVAYITQTTLSVDDTKDI 180 Query: 242 IAALQAKFTDIQGPDIRDICYATQNRQSAVRDLSKLVDVILVVGAANSSNSNRLREIGTE 301 I+ALQA+FTD+QGPDIRDICYATQNRQSAV DLSKLVDVILVVGAANSSNSNRLREIGTE Sbjct: 181 ISALQARFTDLQGPDIRDICYATQNRQSAVWDLSKLVDVILVVGAANSSNSNRLREIGTE 240 Query: 302 VGVASYLIADGSELNPDWLKDAKAVGITAGASAPEVLVDDVIEALRRIRPVSVSVVPGRE 361 GVASYL+ADGSELNP+WLK A+AVGITAGASAPEVLVDDVIEALRRI PV V+VVPGRE Sbjct: 241 AGVASYLVADGSELNPEWLKGARAVGITAGASAPEVLVDDVIEALRRIGPVEVAVVPGRE 300 Query: 362 ENIEFRLPAELTAG 375 ENIEFRLPAEL AG Sbjct: 301 ENIEFRLPAELVAG 314