BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0044.p (191 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001204689.1| hypothetical protein BRADO2634 [Bradyrhizobi... 254 5e-66 ref|YP_001239004.1| hypothetical protein BBta_2974 [Bradyrhizobi... 249 1e-64 ref|NP_769649.1| hypothetical protein bll3009 [Bradyrhizobium ja... 248 4e-64 ref|YP_318870.1| hypothetical protein Nwi_2264 [Nitrobacter wino... 244 5e-63 ref|ZP_01047649.1| hypothetical protein NB311A_17846 [Nitrobacte... 238 2e-61 >ref|YP_001204689.1| hypothetical protein BRADO2634 [Bradyrhizobium sp. ORS 278] emb|CAL76452.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 207 Score = 254 bits (649), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 133/191 (69%), Positives = 145/191 (75%), Gaps = 8/191 (4%) Query: 1 LATVLSPALAADPTGDWKVADGVATIRVAQCNGNMWGAVSWEKTPGGKDKNNPDAAKQSR 60 A +S ALAADPTGDW+VADGVA IRVAQCNG+MWG V+WEKTPGG+D NNPD A+QSR Sbjct: 20 FAAGISSALAADPTGDWRVADGVANIRVAQCNGSMWGVVAWEKTPGGRDSNNPDPARQSR 79 Query: 61 PTLGMPILIDMKKKAGVDAWEGQVYNAKDGQLYSSTIKPVGTDQLEIQGCVLGFLCGGET 120 PTLGMPILIDMKKKAG DAWEGQVYNAKDGQLYSSTI P D LEI+GCVLGFLCGGET Sbjct: 80 PTLGMPILIDMKKKAGADAWEGQVYNAKDGQLYSSTITPTDPDHLEIKGCVLGFLCGGET 139 Query: 121 WTRVGPPIPVSAAGSPAAKGTQP---KSTAPQKTTGAVAPATKPAQKQAPGNANAQADAV 177 WTRVGPPIP S S AKGTQ + AP+ TTGA A AD + Sbjct: 140 WTRVGPPIPSSPVNS-MAKGTQKPIAPAPAPKTTTGAA----HSGAVATAKPAAKPADQI 194 Query: 178 GDICLLPDIAR 188 GDICLLP++AR Sbjct: 195 GDICLLPEVAR 205 >ref|YP_001239004.1| hypothetical protein BBta_2974 [Bradyrhizobium sp. BTAi1] gb|ABQ35098.1| hypothetical protein BBta_2974 [Bradyrhizobium sp. BTAi1] Length = 207 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 133/188 (70%), Positives = 142/188 (75%), Gaps = 2/188 (1%) Query: 1 LATVLSPALAADPTGDWKVADGVATIRVAQCNGNMWGAVSWEKTPGGKDKNNPDAAKQSR 60 A+ +S ALAADPTGDW+V+DGVA IRVAQCNG+MWG V+WEKTPGG+D NNPD AKQSR Sbjct: 20 FASGISSALAADPTGDWRVSDGVANIRVAQCNGSMWGVVAWEKTPGGRDSNNPDPAKQSR 79 Query: 61 PTLGMPILIDMKKKAGVDAWEGQVYNAKDGQLYSSTIKPVGTDQLEIQGCVLGFLCGGET 120 PTLGMPILIDMKKKAG D WEGQVYNAKDGQLYSSTI P D LEI+GCVLGFLCGGET Sbjct: 80 PTLGMPILIDMKKKAGADQWEGQVYNAKDGQLYSSTITPSDPDHLEIKGCVLGFLCGGET 139 Query: 121 WTRVGPPIPVSAAGSPAAKGTQPKSTAPQKTTGAVAPATKPAQKQAPGNANAQADAVGDI 180 WTRVGPPIP S S AKGTQ K AP T A A AD VGDI Sbjct: 140 WTRVGPPIPSSPVNS-MAKGTQ-KPIAPAPAAAPAPKTTTGVVAAAGKPAAKPADQVGDI 197 Query: 181 CLLPDIAR 188 CLLP+IAR Sbjct: 198 CLLPEIAR 205 >ref|NP_769649.1| hypothetical protein bll3009 [Bradyrhizobium japonicum USDA 110] dbj|BAC48274.1| bll3009 [Bradyrhizobium japonicum USDA 110] Length = 226 Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 130/207 (62%), Positives = 145/207 (70%), Gaps = 26/207 (12%) Query: 5 LSPALAADPTGDWKVADGVATIRVAQCNGNMWGAVSWEKTPGGKDKNNPDAAKQSRPTLG 64 L+PALAADPTGDW+VADGVA IRVAQCNG+MWGAVSWEK PGG+D+NNPD +KQ+RPTLG Sbjct: 26 LTPALAADPTGDWRVADGVANIRVAQCNGSMWGAVSWEKQPGGRDENNPDVSKQNRPTLG 85 Query: 65 MPILIDMKKKAGVDAWEGQVYNAKDGQLYSSTIKPVGTDQLEIQGCVLGFLCGGETWTRV 124 M LIDMKKK GVD WEGQVYNAKDGQLYS+TI P GTDQLEI+GCV+GFLCGGETWTRV Sbjct: 86 MATLIDMKKKPGVDQWEGQVYNAKDGQLYSATITPAGTDQLEIKGCVMGFLCGGETWTRV 145 Query: 125 GPPIPVSAAGSPAAKGTQPKSTAPQKTTGAVAPATKPAQKQAP----------------- 167 GPPIP+S A + A +P AP+ A T P Q P Sbjct: 146 GPPIPLSPANAMAKGAPKPTGAAPK------AQGTAPPQGTVPQGTTGATAPAPAPKTAT 199 Query: 168 ---GNANAQADAVGDICLLPDIARPTH 191 AD VGDICLLP+IA H Sbjct: 200 AAKPGQKGAADPVGDICLLPEIAGLAH 226 >ref|YP_318870.1| hypothetical protein Nwi_2264 [Nitrobacter winogradskyi Nb-255] gb|ABA05518.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 213 Score = 244 bits (623), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 120/185 (64%), Positives = 140/185 (75%), Gaps = 12/185 (6%) Query: 10 AADPTGDWKVADGVATIRVAQCNGNMWGAVSWEKTPGGKDKNNPDAAKQSRPTLGMPILI 69 AADPTGDW+VA+GVA IRVA+CNG+MWG V+WEK PGG D+NNPDA+K+SRPTLGMPIL+ Sbjct: 38 AADPTGDWRVAEGVANIRVAECNGSMWGVVAWEKKPGGVDRNNPDASKRSRPTLGMPILL 97 Query: 70 DMKKKAGVDAWEGQVYNAKDGQLYSSTIKPVGTDQLEIQGCVLGFLCGGETWTRVGPPIP 129 DMKKKA DAWEGQVYNAKDG+ Y STIK DQLEI+GCVLGFLCGGETWTRVGPPI Sbjct: 98 DMKKKADKDAWEGQVYNAKDGKTYESTIKLASPDQLEIEGCVLGFLCGGETWTRVGPPIS 157 Query: 130 VSAAGSPAAKGTQP---KSTAPQKTTGAVAPATKPAQKQAPGNANAQADAVGDICLLPDI 186 SA+ +P A ++ K+ P KT+ ++ +A A D VGDICLLPDI Sbjct: 158 TSASNAPGATASKTGTAKTAKPHKTS---------SKNKASTTGTASDDPVGDICLLPDI 208 Query: 187 ARPTH 191 A TH Sbjct: 209 AGATH 213 >ref|ZP_01047649.1| hypothetical protein NB311A_17846 [Nitrobacter sp. Nb-311A] gb|EAQ34409.1| hypothetical protein NB311A_17846 [Nitrobacter sp. Nb-311A] Length = 207 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 121/182 (66%), Positives = 138/182 (75%), Gaps = 4/182 (2%) Query: 10 AADPTGDWKVADGVATIRVAQCNGNMWGAVSWEKTPGGKDKNNPDAAKQSRPTLGMPILI 69 AADPTG+W+VA+GVA IRVA+CNG MWG V+WEK PGG D+NNPDA+K+SRPTLGMPIL+ Sbjct: 30 AADPTGEWRVAEGVANIRVAECNGAMWGVVAWEKRPGGVDQNNPDASKRSRPTLGMPILL 89 Query: 70 DMKKKAGVDAWEGQVYNAKDGQLYSSTIKPVGTDQLEIQGCVLGFLCGGETWTRVGPPIP 129 DMKKKA DAWEG VYNAKDG+ Y STI V DQLEI+GCVLGFLCGGETWTRV PPIP Sbjct: 90 DMKKKAEKDAWEGHVYNAKDGKTYESTITLVSPDQLEIEGCVLGFLCGGETWTRVAPPIP 149 Query: 130 VSAAGSPAAKGTQPKSTAPQKTTGAVAPATKPAQKQAPGNANAQADAVGDICLLPDIARP 189 S + PA GT PK+ + T+ A T QK A AN+ D VGDICLLPD+A Sbjct: 150 SSPSNGPA--GTTPKAATARATSPKAAHKTT-GQKSAAA-ANSSTDPVGDICLLPDVAGT 205 Query: 190 TH 191 H Sbjct: 206 AH 207