BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0039.p (368 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769308.1| hypothetical protein blr2668 [Bradyrhizobium ja... 552 e-155 ref|YP_001236777.1| hypothetical protein BBta_0598 [Bradyrhizobi... 437 e-120 ref|NP_771379.1| hypothetical protein bll4739 [Bradyrhizobium ja... 429 e-118 ref|NP_947336.1| hypothetical protein RPA1991 [Rhodopseudomonas ... 409 e-112 ref|YP_001991199.1| hypothetical protein Rpal_2203 [Rhodopseudom... 405 e-111 >ref|NP_769308.1| hypothetical protein blr2668 [Bradyrhizobium japonicum USDA 110] dbj|BAC47933.1| blr2668 [Bradyrhizobium japonicum USDA 110] Length = 357 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 284/330 (86%), Positives = 300/330 (90%), Gaps = 1/330 (0%) Query: 40 VWSATVHADEGGVSYWLPGRFGSLAATPQVPGWSMAEVYYHTSVSAFGNAAAAREIQVGR 99 V S +ADE GVSYWLPGRF SLAA P VPGWSMAEVYYHTSVSAFGNAAAAREI+VGR Sbjct: 28 VSSDPAYADEDGVSYWLPGRFSSLAAVPAVPGWSMAEVYYHTSVSAFGNAAAAREIRVGR 87 Query: 100 IPAAVNVDLNLHLNAQADLVLLNPTYTFATPVLGAQLAIGVTGLFGRSSANLDGTLTAAV 159 IPA VNVDLNL LNAQADLVLLNPTYTFATPVLG QLAIG+TGLFGRS+A LDGTLT AV Sbjct: 88 IPANVNVDLNLRLNAQADLVLLNPTYTFATPVLGGQLAIGITGLFGRSAATLDGTLTTAV 147 Query: 160 GPLAATRAGSFGDSITSVGDLYPQATLKWNAGVHNFMTYVTGDIPVGAYSPTRLANLGIG 219 GP TR G+ DSITSVGDLYPQATLKWNAGVHNFMTY+TGDIPVGAYSPTRLANLGIG Sbjct: 148 GPFVTTRTGTLSDSITSVGDLYPQATLKWNAGVHNFMTYLTGDIPVGAYSPTRLANLGIG 207 Query: 220 HAAIDGGGGYTYFNPQTGREFSAVAGFTYNFKDQDTQYQNGIDFHLDWGASQFLSKQFFV 279 H AIDGGGGYTYFN + G EFSAVAGFTYNFK+ DTQY+NG+DFH+DWGASQFLSKQ FV Sbjct: 208 HGAIDGGGGYTYFNEKAGHEFSAVAGFTYNFKNPDTQYRNGVDFHIDWGASQFLSKQLFV 267 Query: 280 GLVGYAYQQVTDDFGQHPILGGFRSRVLGVGPQIGFLFPVGDMQGYLNLKGYGEFAAENR 339 GLVGY YQQVTDDFGQ PILGGFRSRV+GVGPQIG+LFPVGD+QGYLNLKGYGEFAAENR Sbjct: 268 GLVGYYYQQVTDDFGQPPILGGFRSRVVGVGPQIGYLFPVGDLQGYLNLKGYGEFAAENR 327 Query: 340 PAGWNTWLTFSISPMAPT-TVASTRRPITK 368 PAGWNTWLTFS+SPMAPT TVA TRR +TK Sbjct: 328 PAGWNTWLTFSLSPMAPTSTVAPTRRIVTK 357 >ref|YP_001236777.1| hypothetical protein BBta_0598 [Bradyrhizobium sp. BTAi1] gb|ABQ32871.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 364 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 207/324 (63%), Positives = 257/324 (79%), Gaps = 1/324 (0%) Query: 46 HADEGGVSYWLPGRFGSLAATPQVPGWSMAEVYYHTSVSAFGNAAAAREIQVGRIPAAVN 105 ADE G+SYWLPG +GS++ATP PGWS+A +YYH + A G AAA+RE+Q+GR+ AV Sbjct: 41 RADESGISYWLPGLYGSMSATPTTPGWSIAAIYYHANAGASGAAAASREVQIGRLSTAVA 100 Query: 106 VDLNLHLNAQADLVLLNPTYTFATPVLGAQLAIGVTGLFGRSSANLDGTLTAAVGPLAAT 165 VDLN+ L QADL+L+ PTYTFATPVLG QL+ + ++ R+SA++ GTLT AVGP++ T Sbjct: 101 VDLNVVLRGQADLMLIAPTYTFATPVLGGQLSATLASIYARNSASIAGTLTTAVGPISIT 160 Query: 166 RAGSFGDSITSVGDLYPQATLKWNAGVHNFMTYVTGDIPVGAYSPTRLANLGIGHAAIDG 225 R G +++TS GDLYP A LKWN GVHNF+ Y TG+IP+G YSP RLAN+G+GH A+D Sbjct: 161 RNGLLEEAVTSYGDLYPTAKLKWNTGVHNFIVYGTGNIPIGDYSPNRLANIGLGHGAVDV 220 Query: 226 GGGYTYFNPQTGREFSAVAGFTYNFKDQDTQYQNGIDFHLDWGASQFLSKQFFVGLVGYA 285 GGGYTYFNP TG E S V G TYNFK++DTQYQ+G+DFH DWGASQFLSKQ FVGLVGY Sbjct: 221 GGGYTYFNPATGLELSGVGGLTYNFKNRDTQYQSGVDFHFDWGASQFLSKQVFVGLVGYV 280 Query: 286 YQQVTDDFGQHPILGGFRSRVLGVGPQIGFLFPVGDMQGYLNLKGYGEFAAENRPAGWNT 345 YQQ+TDDFGQ +LG FRSRV G+GPQIG+ F +G Q +L +KGYGEFAA+NRP+GWNT Sbjct: 281 YQQITDDFGQPAVLGSFRSRVFGIGPQIGYAFQIGSNQAFLGVKGYGEFAAQNRPSGWNT 340 Query: 346 WLTFSISPMAPTTVAS-TRRPITK 368 WLTFSIS P ++A+ T+ P+ K Sbjct: 341 WLTFSISEAVPASIATPTKHPMHK 364 >ref|NP_771379.1| hypothetical protein bll4739 [Bradyrhizobium japonicum USDA 110] dbj|BAC50004.1| bll4739 [Bradyrhizobium japonicum USDA 110] Length = 416 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 236/370 (63%), Positives = 281/370 (75%), Gaps = 11/370 (2%) Query: 5 VLRRNGHATRRGKTKRGIRF-----PFGASVMATAMLTMSVWSATVHADEGGVSYWLPGR 59 +RR RR + K + F P S + A LT S A+ ADE G+S+W+PG Sbjct: 52 CIRRT---ARRLQMKPTLEFAGASQPTLLSAVVVAALTFSPQIAS--ADESGISFWVPGL 106 Query: 60 FGSLAATPQVPGWSMAEVYYHTSVSAFGNAAAAREIQVGRIPAAVNVDLNLHLNAQADLV 119 FGSLAA P PGWS+ +YYHTSVSA G AAAARE+Q+GR VNV+LN++L A DL+ Sbjct: 107 FGSLAAAPTAPGWSLGTIYYHTSVSASGAAAAAREVQIGRFSPNVNVNLNVNLKAPPDLL 166 Query: 120 LLNPTYTFATPVLGAQLAIGVTGLFGRSSANLDGTLTAAVGPLAATRAGSFGDSITSVGD 179 L PTYTFATPVLG QL++GV G++GR+S LDGTLT GP++ATR GS DS+T GD Sbjct: 167 FLAPTYTFATPVLGGQLSVGVMGVYGRNSTTLDGTLTTGFGPISATRTGSISDSLTGFGD 226 Query: 180 LYPQATLKWNAGVHNFMTYVTGDIPVGAYSPTRLANLGIGHAAIDGGGGYTYFNPQTGRE 239 LYP ++KW+ GVHN+MTYVTGDIPVGAY P+RL+N+GIGH AID GGGYTY NP TG E Sbjct: 227 LYPMVSMKWHDGVHNYMTYVTGDIPVGAYEPSRLSNIGIGHGAIDAGGGYTYLNPMTGYE 286 Query: 240 FSAVAGFTYNFKDQDTQYQNGIDFHLDWGASQFLSKQFFVGLVGYAYQQVTDDFGQHPIL 299 FS V GFTYNFK+ DT Q+G+DFH DWGAS+FLSKQ FVGLVGYAYQQV++D G P L Sbjct: 287 FSGVGGFTYNFKNPDTLVQSGVDFHFDWGASKFLSKQAFVGLVGYAYQQVSNDTGGLPAL 346 Query: 300 GGFRSRVLGVGPQIGFLFPVGDMQGYLNLKGYGEFAAENRPAGWNTWLTFSISPMAP-TT 358 GGFRSRV G+GPQ G+LFP+G MQGYLN+KGYGEF A NRP+GWNTWLTF+ISP AP +T Sbjct: 347 GGFRSRVFGIGPQFGYLFPIGGMQGYLNIKGYGEFEAANRPSGWNTWLTFAISPAAPEST 406 Query: 359 VASTRRPITK 368 VA TR +TK Sbjct: 407 VAPTRHRVTK 416 >ref|NP_947336.1| hypothetical protein RPA1991 [Rhodopseudomonas palustris CGA009] emb|CAE27432.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 353 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/316 (63%), Positives = 234/316 (74%) Query: 46 HADEGGVSYWLPGRFGSLAATPQVPGWSMAEVYYHTSVSAFGNAAAAREIQVGRIPAAVN 105 +DE GVS WLPG FGS+AA P PGWS A VYYHTS+SA A ARE+Q+GR +VN Sbjct: 34 RSDEAGVSMWLPGTFGSMAAVPTAPGWSAAGVYYHTSLSAGREVATAREVQIGRFTPSVN 93 Query: 106 VDLNLHLNAQADLVLLNPTYTFATPVLGAQLAIGVTGLFGRSSANLDGTLTAAVGPLAAT 165 V L+ LNA DL LL PTYTFATPVLG Q ++G T + GR+SA L+ TL+A + P Sbjct: 94 VGLSADLNATGDLFLLAPTYTFATPVLGGQASVGFTSVMGRASAGLNATLSATIPPFNVI 153 Query: 166 RAGSFGDSITSVGDLYPQATLKWNAGVHNFMTYVTGDIPVGAYSPTRLANLGIGHAAIDG 225 R+ S DS++ VGDLYP A LKWN GV+N+M Y TGDIPVGAY+ +R+ NLGIGH AID Sbjct: 154 RSDSINDSVSGVGDLYPVAKLKWNQGVNNWMIYATGDIPVGAYNRSRIINLGIGHGAIDL 213 Query: 226 GGGYTYFNPQTGREFSAVAGFTYNFKDQDTQYQNGIDFHLDWGASQFLSKQFFVGLVGYA 285 GGGYTYFNP+ G EFS V GFT NFK+ T Y+NG+DFHLDW SQF+SKQFFVG VGYA Sbjct: 214 GGGYTYFNPKAGSEFSVVMGFTENFKNTSTDYKNGLDFHLDWAVSQFVSKQFFVGAVGYA 273 Query: 286 YQQVTDDFGQHPILGGFRSRVLGVGPQIGFLFPVGDMQGYLNLKGYGEFAAENRPAGWNT 345 Y Q+T D G LG F+SRV VGPQIG+LFPVGDMQG LNLKGY EF A+NR GWNT Sbjct: 274 YNQLTGDSGTGAKLGPFKSRVEAVGPQIGYLFPVGDMQGVLNLKGYWEFDAQNRAKGWNT 333 Query: 346 WLTFSISPMAPTTVAS 361 WLTF++S P AS Sbjct: 334 WLTFAVSAPPPPAGAS 349 >ref|YP_001991199.1| hypothetical protein Rpal_2203 [Rhodopseudomonas palustris TIE-1] gb|ACF00724.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 349 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/307 (64%), Positives = 230/307 (74%) Query: 46 HADEGGVSYWLPGRFGSLAATPQVPGWSMAEVYYHTSVSAFGNAAAAREIQVGRIPAAVN 105 +DE GVS WLPG FGS+AA P PGWS A VYYHTS+SA A ARE+Q+GR +N Sbjct: 26 RSDEAGVSMWLPGTFGSMAAVPTAPGWSAAGVYYHTSLSAGREVATAREVQIGRFTPNLN 85 Query: 106 VDLNLHLNAQADLVLLNPTYTFATPVLGAQLAIGVTGLFGRSSANLDGTLTAAVGPLAAT 165 V L+ LNA DL LL PTYTFATPVLG Q ++G T + GR+SA L+ TL+A + P Sbjct: 86 VGLSADLNATGDLFLLAPTYTFATPVLGGQASVGFTSVMGRASAGLNATLSATIPPFNVI 145 Query: 166 RAGSFGDSITSVGDLYPQATLKWNAGVHNFMTYVTGDIPVGAYSPTRLANLGIGHAAIDG 225 R+ S DS++ VGDLYP A LKWN GV+N+M Y TGDIPVGAY+ +R+ NLGIGH AID Sbjct: 146 RSDSINDSVSGVGDLYPVAKLKWNQGVNNWMIYATGDIPVGAYNRSRIINLGIGHGAIDL 205 Query: 226 GGGYTYFNPQTGREFSAVAGFTYNFKDQDTQYQNGIDFHLDWGASQFLSKQFFVGLVGYA 285 GGGYTYFNP+ G EFS V GFT NFK+ T Y+NG+DFHLDW SQF+SKQFFVG VGYA Sbjct: 206 GGGYTYFNPKAGSEFSVVMGFTENFKNTSTDYKNGLDFHLDWAVSQFVSKQFFVGAVGYA 265 Query: 286 YQQVTDDFGQHPILGGFRSRVLGVGPQIGFLFPVGDMQGYLNLKGYGEFAAENRPAGWNT 345 Y Q+T D G LG F+SRV VGPQIG+LFPVGDMQG LNLKGY EF A+NR GWNT Sbjct: 266 YNQLTGDSGTGAKLGPFKSRVEAVGPQIGYLFPVGDMQGVLNLKGYWEFDAQNRAKGWNT 325 Query: 346 WLTFSIS 352 WLTF++S Sbjct: 326 WLTFAVS 332