BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0037.p (539 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773607.1| MFS permease [Bradyrhizobium japonicum USDA 110... 935 0.0 ref|NP_770891.1| MFS permease [Bradyrhizobium japonicum USDA 110... 808 0.0 ref|YP_483811.1| hypothetical protein RPB_0189 [Rhodopseudomonas... 722 0.0 ref|YP_001991378.1| hypothetical protein Rpal_2389 [Rhodopseudom... 681 0.0 ref|NP_947444.1| MFS family diterpenoid transporter [Rhodopseudo... 676 0.0 >ref|NP_773607.1| MFS permease [Bradyrhizobium japonicum USDA 110] dbj|BAC52232.1| MFS permease [Bradyrhizobium japonicum USDA 110] Length = 552 Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/539 (90%), Positives = 514/539 (95%) Query: 1 VRNASPWIAFRHTTFTVIWIATVVANVGTWMYNAASGWLMTSLDANPLTVSLVQVASSLP 60 V + SPWIAFRHTTFTV+WIATVVANVGTWMYNAASGWLMTSLDANPLTVSLVQVASSLP Sbjct: 14 VPDTSPWIAFRHTTFTVVWIATVVANVGTWMYNAASGWLMTSLDANPLTVSLVQVASSLP 73 Query: 61 MFLFALPAGALADTVDKRRFLIGCEIVLTIIAAASAALVGLNLVTPPILLLFTFLLGAGA 120 MFLFALPAGALADTVDKRRFLIGCEIVLTIIAAASA LVGLNLVTPPILLLFTFLLGAGA Sbjct: 74 MFLFALPAGALADTVDKRRFLIGCEIVLTIIAAASAVLVGLNLVTPPILLLFTFLLGAGA 133 Query: 121 AFTAPAWQSVVPQLVPRQDLAAAVASNGVGVNISRAIGPALGGAVIGGLGIAAPFWINAL 180 AFTAPAWQSVVPQLVPRQDLAAAVA NGVGVNISRAIGPALGGAVIGG GIAAPFWINAL Sbjct: 134 AFTAPAWQSVVPQLVPRQDLAAAVAGNGVGVNISRAIGPALGGAVIGGFGIAAPFWINAL 193 Query: 181 SNFAVIGALLWWRLASSQGNALPPERLAGAMVVGFRHARFNPKLRATLVRAATFFFFASA 240 SNFAVIGALLWWR ASSQG+ALPPERLAGAMV+GFRHARFNPKLRATLVRAA FFFFASA Sbjct: 194 SNFAVIGALLWWRPASSQGSALPPERLAGAMVIGFRHARFNPKLRATLVRAAAFFFFASA 253 Query: 241 YWALLPLVARNQIAGGPALYGILLGAIGVGAVIGAFMLPWMKSTFGPNGLVAAGTVGTAL 300 YWALLPLVARNQIAGGPALYGILLGAIGVGAVIGAF+LPWM++TFGPNGLVAAGT GTAL Sbjct: 254 YWALLPLVARNQIAGGPALYGILLGAIGVGAVIGAFILPWMRTTFGPNGLVAAGTAGTAL 313 Query: 301 SLILLGIARYPEIGLAACLIAGVSWIAVLATINVSVQVSLPDWVRGRGLAIFVTAFFGAM 360 SLILLGIAR+ EIGLAACLIAG+SWI VLAT+NVSVQVSLPDWVRGRGLAIFVT FFGAM Sbjct: 314 SLILLGIARHAEIGLAACLIAGISWIGVLATVNVSVQVSLPDWVRGRGLAIFVTVFFGAM 373 Query: 361 TAGSVLWGQLASGLGLPAAHFLAAAGALAGIALTWRWKLQTGAGVDLAPSMHWPAPILAI 420 TAGS LWGQ+ASGLGLP AHFLAAAGA+AGIALTWRWKLQTGAG+DLAPSMHWP+P+LAI Sbjct: 374 TAGSALWGQIASGLGLPTAHFLAAAGAVAGIALTWRWKLQTGAGIDLAPSMHWPSPVLAI 433 Query: 421 DADADRGPVLITVEYFIAPEKRDAFLAAVTELGRQRRSDGAYSWDVFEDAAESGRFLETF 480 +ADADRGPVLITVEY I+ E+R+AFL ++ +L +QRR DGAYSWDVFEDAAESGRFLETF Sbjct: 434 EADADRGPVLITVEYRISAERREAFLVSIRDLEQQRRRDGAYSWDVFEDAAESGRFLETF 493 Query: 481 MVASWLEHLRQHQRVTNTDKVVQDAIREYGAAAEPKVTHFIAASFRQAGLGTRSNQSLP 539 MVASWLEHLRQHQRVTNTD+ VQDAIR++GAAAEPKV H IAA+FRQ GLGT S QSLP Sbjct: 494 MVASWLEHLRQHQRVTNTDRAVQDAIRKFGAAAEPKVAHLIAANFRQTGLGTPSKQSLP 552 >ref|NP_770891.1| MFS permease [Bradyrhizobium japonicum USDA 110] dbj|BAC49516.1| MFS permease [Bradyrhizobium japonicum USDA 110] Length = 544 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/522 (82%), Positives = 478/522 (91%) Query: 2 RNASPWIAFRHTTFTVIWIATVVANVGTWMYNAASGWLMTSLDANPLTVSLVQVASSLPM 61 ++ASPWIAFRH FTV+WIATVVANVGTWMYNAASGWLMTSL+ +PLTVSLVQVASSLPM Sbjct: 18 QSASPWIAFRHKAFTVVWIATVVANVGTWMYNAASGWLMTSLNPDPLTVSLVQVASSLPM 77 Query: 62 FLFALPAGALADTVDKRRFLIGCEIVLTIIAAASAALVGLNLVTPPILLLFTFLLGAGAA 121 FLFALPAGALADTVD+RRFLIG EI+LT++A SA LV L+L+ P ILLLFTFLLGAG+A Sbjct: 78 FLFALPAGALADTVDRRRFLIGSEILLTVVATVSAVLVWLDLINPSILLLFTFLLGAGSA 137 Query: 122 FTAPAWQSVVPQLVPRQDLAAAVASNGVGVNISRAIGPALGGAVIGGLGIAAPFWINALS 181 FTAPAWQS+VPQLVP+QDLAAAVA+NGVGVNISRAIGPALGG VIG LGIAAPFWINALS Sbjct: 138 FTAPAWQSIVPQLVPKQDLAAAVATNGVGVNISRAIGPALGGIVIGVLGIAAPFWINALS 197 Query: 182 NFAVIGALLWWRLASSQGNALPPERLAGAMVVGFRHARFNPKLRATLVRAATFFFFASAY 241 NFAVIGALLWWR +SQG++LPPERL GA+V+GFRHAR+N LRATL+RA FFFFASAY Sbjct: 198 NFAVIGALLWWRPPTSQGSSLPPERLTGALVIGFRHARYNLDLRATLIRAVAFFFFASAY 257 Query: 242 WALLPLVARNQIAGGPALYGILLGAIGVGAVIGAFMLPWMKSTFGPNGLVAAGTVGTALS 301 WALLPLVARNQIAGGP LYGILLGAIG+GAV GAF LPW+K+ GP+ LV+AGT+GTA Sbjct: 258 WALLPLVARNQIAGGPELYGILLGAIGIGAVGGAFALPWLKAVLGPDRLVSAGTLGTAAC 317 Query: 302 LILLGIARYPEIGLAACLIAGVSWIAVLATINVSVQVSLPDWVRGRGLAIFVTAFFGAMT 361 L+LLG+ARY IG AACL+AG+SWIAVLA++NVSVQ+SLPDWVRGRGLA+FVT FFGAMT Sbjct: 318 LVLLGVARYSAIGFAACLLAGMSWIAVLASLNVSVQMSLPDWVRGRGLAMFVTVFFGAMT 377 Query: 362 AGSVLWGQLASGLGLPAAHFLAAAGALAGIALTWRWKLQTGAGVDLAPSMHWPAPILAID 421 AGS LWGQLAS GLPAAHF+AAAGA+AGIALTWRWKLQ G GVDLAPSMHWPAP+LA+D Sbjct: 378 AGSALWGQLASAFGLPAAHFIAAAGAVAGIALTWRWKLQGGQGVDLAPSMHWPAPVLAVD 437 Query: 422 ADADRGPVLITVEYFIAPEKRDAFLAAVTELGRQRRSDGAYSWDVFEDAAESGRFLETFM 481 ADADRGPVLITVEY I PEKRD FLAA+ +LG+QR+ DGAYSWDVFEDAA SGRFLETFM Sbjct: 438 ADADRGPVLITVEYQINPEKRDGFLAAIRDLGQQRQRDGAYSWDVFEDAAASGRFLETFM 497 Query: 482 VASWLEHLRQHQRVTNTDKVVQDAIREYGAAAEPKVTHFIAA 523 VASWLEHLRQHQRVTN DKVVQDAIRE+GAA EPKVTHFIAA Sbjct: 498 VASWLEHLRQHQRVTNADKVVQDAIREFGAAGEPKVTHFIAA 539 >ref|YP_483811.1| hypothetical protein RPB_0189 [Rhodopseudomonas palustris HaA2] gb|ABD04900.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 539 Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/523 (76%), Positives = 451/523 (86%) Query: 3 NASPWIAFRHTTFTVIWIATVVANVGTWMYNAASGWLMTSLDANPLTVSLVQVASSLPMF 62 ASPWIAFRHT FTV+W ATVVANVGTWMYNAASGWLMTSL+A+PLTVSLVQVASSLPMF Sbjct: 15 RASPWIAFRHTAFTVVWTATVVANVGTWMYNAASGWLMTSLEADPLTVSLVQVASSLPMF 74 Query: 63 LFALPAGALADTVDKRRFLIGCEIVLTIIAAASAALVGLNLVTPPILLLFTFLLGAGAAF 122 LFA+PAGALAD VDKRRFLI EIVLT+ AAASA LV L L+ P LLLFTFLLGAGAAF Sbjct: 75 LFAIPAGALADIVDKRRFLILIEIVLTVFAAASAVLVWLGLMNPFQLLLFTFLLGAGAAF 134 Query: 123 TAPAWQSVVPQLVPRQDLAAAVASNGVGVNISRAIGPALGGAVIGGLGIAAPFWINALSN 182 APAWQS+VP LVP++ LA+AVASNGVG+N+SRAIGPALGG VIG GIAAPFWINALSN Sbjct: 135 AAPAWQSIVPDLVPKEHLASAVASNGVGINVSRAIGPALGGVVIGVAGIAAPFWINALSN 194 Query: 183 FAVIGALLWWRLASSQGNALPPERLAGAMVVGFRHARFNPKLRATLVRAATFFFFASAYW 242 FAVIGALLWWR A+ + LPPERL A+V+GFRHAR+N LRATLVRA FFFFASAYW Sbjct: 195 FAVIGALLWWRPAAKRAATLPPERLFSAIVIGFRHARYNLDLRATLVRAVAFFFFASAYW 254 Query: 243 ALLPLVARNQIAGGPALYGILLGAIGVGAVIGAFMLPWMKSTFGPNGLVAAGTVGTALSL 302 ALLPLVAR++IAGGP LYGILLGAIG+GA++GAF+L +KS GP+ LVAAGT+GTA+SL Sbjct: 255 ALLPLVARSRIAGGPELYGILLGAIGLGAIVGAFLLQGLKSALGPDRLVAAGTLGTAVSL 314 Query: 303 ILLGIARYPEIGLAACLIAGVSWIAVLATINVSVQVSLPDWVRGRGLAIFVTAFFGAMTA 362 +LLG + E+ AAC IAGVSWIAVLA +NVSVQV+LPDWVRGRGLA+FVT FFGAMTA Sbjct: 315 VLLGSVQRVELATAACFIAGVSWIAVLANLNVSVQVALPDWVRGRGLAMFVTVFFGAMTA 374 Query: 363 GSVLWGQLASGLGLPAAHFLAAAGALAGIALTWRWKLQTGAGVDLAPSMHWPAPILAIDA 422 GS LWGQLAS GLPAAHF AA GA+ GIA+TWRWKL+ A DLAPSMHWPAP+LAIDA Sbjct: 375 GSALWGQLASSFGLPAAHFAAAVGAVVGIAVTWRWKLRGSAEHDLAPSMHWPAPVLAIDA 434 Query: 423 DADRGPVLITVEYFIAPEKRDAFLAAVTELGRQRRSDGAYSWDVFEDAAESGRFLETFMV 482 DAD+GPVLITVEY +A ++RDAFL A+ +L RQRR DGAY+WDVFED +E GRF+E F V Sbjct: 435 DADQGPVLITVEYHVAADRRDAFLLAMRKLSRQRRRDGAYAWDVFEDTSERGRFVEVFKV 494 Query: 483 ASWLEHLRQHQRVTNTDKVVQDAIREYGAAAEPKVTHFIAASF 525 ASWLEHLRQH RVTN D++ Q+AIR + A+AEP+VTH +AA F Sbjct: 495 ASWLEHLRQHDRVTNADRIDQNAIRHFHASAEPRVTHLLAAKF 537 >ref|YP_001991378.1| hypothetical protein Rpal_2389 [Rhodopseudomonas palustris TIE-1] gb|ACF00903.1| protein of unknown function DUF894 DitE [Rhodopseudomonas palustris TIE-1] Length = 549 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/519 (73%), Positives = 441/519 (84%), Gaps = 2/519 (0%) Query: 5 SPWIAFRHTTFTVIWIATVVANVGTWMYNAASGWLMTSLDANPLTVSLVQVASSLPMFLF 64 S W AF H FTV+W ATVV+NVGTWM+NAASGWLMTSL+A+PL V+LVQVAS+LP+FLF Sbjct: 17 SSWAAFHHIAFTVVWTATVVSNVGTWMFNAASGWLMTSLEADPLQVALVQVASNLPIFLF 76 Query: 65 ALPAGALADTVDKRRFLIGCEIVLTIIAAASAALVGLNLVTPPILLLFTFLLGAGAAFTA 124 A+PAGALAD VDKR+FLI +IVLT+ A+ASAALV L+TPP LLLFTFLLGAGAAF A Sbjct: 77 AIPAGALADIVDKRKFLIVVQIVLTLFASASAALVWFGLMTPPQLLLFTFLLGAGAAFAA 136 Query: 125 PAWQSVVPQLVPRQDLAAAVASNGVGVNISRAIGPALGGAVIGGLGIAAPFWINALSNFA 184 PA+QS+VP LVP+QDLA+AVASNGVG+NISRAIGPALGG IG LGIAAPFWINA+SN A Sbjct: 137 PAFQSIVPDLVPKQDLASAVASNGVGINISRAIGPALGGVAIGSLGIAAPFWINAVSNLA 196 Query: 185 VIGALLWWRLASSQGNALPPERLAGAMVVGFRHARFNPKLRATLVRAATFFFFASAYWAL 244 VI AL+WWR A+S+ +LPPERL A+V G RHAR N +LRATLVRA FFFFASAYWAL Sbjct: 197 VIAALIWWRPANSRSGSLPPERLIEALVTGIRHARHNTELRATLVRAVAFFFFASAYWAL 256 Query: 245 LPLVARNQIAGGPALYGILLGAIGVGAVIGAFMLPWMKSTFGPNGLVAAGTVGTALSLIL 304 LPLVAR++IAGGP LYGILLGA+G GA+ GA +LP +K+T GP+ LVAAGT+GTAL L++ Sbjct: 257 LPLVARSRIAGGPELYGILLGAVGAGAIGGALVLPKLKATLGPDRLVAAGTLGTALCLVM 316 Query: 305 LGIARYPEIGLAACLIAGVSWIAVLATINVSVQVSLPDWVRGRGLAIFVTAFFGAMTAGS 364 LG+AR E+ +AACL+AG+SWIAVLA++NVSVQV LPDWVRGRGLA+FVT FFGAMTAGS Sbjct: 317 LGLARQVELAVAACLLAGISWIAVLASLNVSVQVVLPDWVRGRGLAMFVTVFFGAMTAGS 376 Query: 365 VLWGQLASGLGLPAAHFLAAAGALAGIALTWRWKLQTGAGVDLAPSMHWPAPILAIDADA 424 LWGQ+AS GLP AHF AAAGA+ GIA TWRWKL+ G VDL+PSMHWP PI++IDA+ Sbjct: 377 ALWGQIASSFGLPIAHFAAAAGAVLGIAATWRWKLKAGVDVDLSPSMHWPTPIVSIDAEP 436 Query: 425 DRGPVLITVEYFIAPEKRDAFLAAVTELGRQRRSDGAYSWDVFEDAAESGRFLETFMVAS 484 D+GPVLITVEY IA RDAFL+AV L RQRR DGAY W VFEDAA+ GRF+ETF VAS Sbjct: 437 DQGPVLITVEYRIAKGHRDAFLSAVRHLSRQRRRDGAYQWGVFEDAADPGRFVETFKVAS 496 Query: 485 WLEHLRQHQRVTNTDKVVQDAIREYGAAAEPKVTHFIAA 523 WLEHLRQH+RVTN D+V+Q+ IR AEPKVTH IAA Sbjct: 497 WLEHLRQHERVTNADRVLQEQIRL--CDAEPKVTHLIAA 533 >ref|NP_947444.1| MFS family diterpenoid transporter [Rhodopseudomonas palustris CGA009] emb|CAE27540.1| Putative diterpenoid Major Facilitator Superfamily (MFS) transporter [Rhodopseudomonas palustris CGA009] Length = 549 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/534 (71%), Positives = 446/534 (83%), Gaps = 6/534 (1%) Query: 5 SPWIAFRHTTFTVIWIATVVANVGTWMYNAASGWLMTSLDANPLTVSLVQVASSLPMFLF 64 S W AF H FTV+W ATVV+NVGTWM+NAASGWLMTSL+A+PL V+LVQVAS+LP+FLF Sbjct: 17 SSWAAFHHIAFTVVWTATVVSNVGTWMFNAASGWLMTSLEADPLQVALVQVASNLPIFLF 76 Query: 65 ALPAGALADTVDKRRFLIGCEIVLTIIAAASAALVGLNLVTPPILLLFTFLLGAGAAFTA 124 A+PAGALAD VDKR+FLI +IVLT+ A+ASAALV L+TP LLLFTFLLGAGAAF A Sbjct: 77 AIPAGALADIVDKRKFLIVVQIVLTLFASASAALVWFGLMTPSQLLLFTFLLGAGAAFAA 136 Query: 125 PAWQSVVPQLVPRQDLAAAVASNGVGVNISRAIGPALGGAVIGGLGIAAPFWINALSNFA 184 PA+QS+VP LVP+QDLA+AVASNGVG+NISRAIGPALGG IG LGIAAPFWINA+SN A Sbjct: 137 PAFQSIVPDLVPKQDLASAVASNGVGINISRAIGPALGGVAIGSLGIAAPFWINAVSNLA 196 Query: 185 VIGALLWWRLASSQGNALPPERLAGAMVVGFRHARFNPKLRATLVRAATFFFFASAYWAL 244 VI AL+WWR A+S+ +LPPERL A+V G RHAR N +LRATLVRA FFFFASAYWAL Sbjct: 197 VIAALIWWRPANSRSGSLPPERLIEALVTGIRHARHNTELRATLVRAVAFFFFASAYWAL 256 Query: 245 LPLVARNQIAGGPALYGILLGAIGVGAVIGAFMLPWMKSTFGPNGLVAAGTVGTALSLIL 304 LPLVAR++IAGGP LYGILLGA+G GA+ GA +LP +K+ GP+ LVAAGT+GTAL L++ Sbjct: 257 LPLVARSRIAGGPELYGILLGAVGAGAIGGALVLPKLKAALGPDRLVAAGTLGTALCLVM 316 Query: 305 LGIARYPEIGLAACLIAGVSWIAVLATINVSVQVSLPDWVRGRGLAIFVTAFFGAMTAGS 364 LG+AR E+ +AACL+AG+SWIAVLA++NVSVQV LPDWVRGRGLA+FVT FFGAMTAGS Sbjct: 317 LGLARQVELAVAACLLAGISWIAVLASLNVSVQVVLPDWVRGRGLAMFVTVFFGAMTAGS 376 Query: 365 VLWGQLASGLGLPAAHFLAAAGALAGIALTWRWKLQTGAGVDLAPSMHWPAPILAIDADA 424 LWGQ+AS GLP AHF AAAGA+ GI TWRWKL+ GA VDL+PSMHWP PI++IDA+ Sbjct: 377 ALWGQIASSFGLPIAHFAAAAGAVLGIVATWRWKLKAGADVDLSPSMHWPTPIVSIDAEP 436 Query: 425 DRGPVLITVEYFIAPEKRDAFLAAVTELGRQRRSDGAYSWDVFEDAAESGRFLETFMVAS 484 D+GPVLITVEY IA RDAFL+AV L RQRR DGAY W VFEDAA+ GRF+ETF VAS Sbjct: 437 DQGPVLITVEYRIAKGHRDAFLSAVRHLSRQRRRDGAYQWGVFEDAADPGRFVETFKVAS 496 Query: 485 WLEHLRQHQRVTNTDKVVQDAIREYGAAAEPKVTHFIAASF----RQAGLGTRS 534 WLEHLRQH+RVTN D+V+Q+ IR + AEPKVTH IA+ RQ L +++ Sbjct: 497 WLEHLRQHERVTNADRVLQEQIRLFD--AEPKVTHLIASPHGHVKRQPMLASQT 548