BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0034.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773603.1| transcriptional regulator [Bradyrhizobium japon... 582 e-164 ref|YP_675590.1| LysR family transcriptional regulator [Mesorhiz... 436 e-120 ref|YP_004538709.1| LysR family transcriptional regulator [Novos... 431 e-118 ref|ZP_06834637.1| transcriptional regulator, LysR family protei... 426 e-117 ref|ZP_08664438.1| LysR family transcriptional regulator [Paraco... 411 e-113 >ref|NP_773603.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC52228.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 329 Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust. Identities = 286/313 (91%), Positives = 298/313 (95%) Query: 1 MDNRVGEMQVFLRVAEAGSYSEAARRLLMTPSTVSKLIGRIEARLGVRLFERSTRRLSLT 60 MDNR+GEMQVFLRV EA SYSEAARRLLMTPSTVSKLIGRIEARLGVRLFERSTRRLSLT Sbjct: 1 MDNRIGEMQVFLRVVEAQSYSEAARRLLMTPSTVSKLIGRIEARLGVRLFERSTRRLSLT 60 Query: 61 SEGRTYQDKSVALLAELDSIERDISRGAATAGGTVRVNTTVAFGVLGLEPLLPAFWKAHP 120 SEGR Y DKSVALLAELD IER ISRGAA AGGT+RVNTTV+FG+ GLEPLLPAFW+AHP Sbjct: 61 SEGRMYHDKSVALLAELDGIERGISRGAAAAGGTIRVNTTVSFGIFGLEPLLPAFWQAHP 120 Query: 121 AIVVDISLSDEIVDMYLDRTDVAFRVGPLQASAMVARRIGVIKRRIVASPDYIDRLGKPE 180 IVVDISLSDEIVDMYLDRTDVAFRVGPLQASAMVARRIGV+KRRIVASPDYI+RLG+P+ Sbjct: 121 EIVVDISLSDEIVDMYLDRTDVAFRVGPLQASAMVARRIGVVKRRIVASPDYINRLGEPK 180 Query: 181 TVDDLSRHNCLGFNFRRSAPVWPLKESGRIVDRAISGSLLANNAQSLRRMAIAGIGLARL 240 V DLSRHNCLGFNFRRSAPVWPLKESGRI DRAISGSLLANNAQSLRRMAIAGIGLARL Sbjct: 181 RVQDLSRHNCLGFNFRRSAPVWPLKESGRIADRAISGSLLANNAQSLRRMAIAGIGLARL 240 Query: 241 ADYHVRDDISAGRLVEVLEGTAGDEEQIHALYHGGPRLPFRVRAFLEFMCPRLTDFMEGR 300 ADYHVRDDISAGRLVEVL+GTAGDEEQIHALYHGGPRLPFRVRAFL+FMCPRLTDFMEGR Sbjct: 241 ADYHVRDDISAGRLVEVLKGTAGDEEQIHALYHGGPRLPFRVRAFLDFMCPRLTDFMEGR 300 Query: 301 IHDDRQSVQASGG 313 D RQ+VQASGG Sbjct: 301 ARDGRQAVQASGG 313 >ref|YP_675590.1| LysR family transcriptional regulator [Mesorhizobium sp. BNC1] gb|ABG64425.1| transcriptional regulator, LysR family [Chelativorans sp. BNC1] Length = 311 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 211/298 (70%), Positives = 251/298 (84%), Gaps = 1/298 (0%) Query: 1 MDNRVGEMQVFLRVAEAGSYSEAARRLLMTPSTVSKLIGRIEARLGVRLFERSTRRLSLT 60 MDNR EMQVFLRV E GS+SEAAR L MTPSTVSKLI R+EARLGVRL ERSTRRLSLT Sbjct: 1 MDNRTWEMQVFLRVVETGSFSEAARLLRMTPSTVSKLISRVEARLGVRLVERSTRRLSLT 60 Query: 61 SEGRTYQDKSVALLAELDSIERDISRGAATAGGTVRVNTTVAFGVLGLEPLLPAFWKAHP 120 +EG+ Y ++S ALL ELD +ER++S GAA GTVRVN +VAFGVLGLEPLLP FW+A+P Sbjct: 61 TEGQIYHERSRALLQELDLLERELSYGAAATDGTVRVNASVAFGVLGLEPLLPEFWRAYP 120 Query: 121 AIVVDISLSDEIVDMYLDRTDVAFRVGPLQASAMVARRIGVIKRRIVASPDYIDRLGKPE 180 IVVD+SLSDEIVD+YLDRTD+AFRVGPL S M+ARRIGV +R+IVASP Y+ R G P Sbjct: 121 NIVVDLSLSDEIVDLYLDRTDIAFRVGPLPDSGMMARRIGVARRKIVASPSYLGRCGTPR 180 Query: 181 TVDDLSRHNCLGFNFRRSAPVWPLKESGRIVDRAISGSLLANNAQSLRRMAIAGIGLARL 240 V+DLSRHNCLGFNFRR+APVWPLKESGR VDR ++GSLLANN +++RRMA+AG+GLAR+ Sbjct: 181 KVEDLSRHNCLGFNFRRAAPVWPLKESGRTVDRVVNGSLLANNGETVRRMALAGVGLARM 240 Query: 241 ADYHVRDDISAGRLVEVL-EGTAGDEEQIHALYHGGPRLPFRVRAFLEFMCPRLTDFM 297 DYHVR D++AGRLVEVL + DEE++HA++ GG R+P RVR FL+F+ PRL F+ Sbjct: 241 GDYHVRADLAAGRLVEVLTDAVESDEEEVHAVFLGGLRMPQRVRVFLDFVVPRLQQFL 298 >ref|YP_004538709.1| LysR family transcriptional regulator [Novosphingobium sp. PP1Y] emb|CCA90742.1| LysR family transcriptional regulator [Novosphingobium sp. PP1Y] Length = 301 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 208/300 (69%), Positives = 253/300 (84%), Gaps = 1/300 (0%) Query: 1 MDNRVGEMQVFLRVAEAGSYSEAARRLLMTPSTVSKLIGRIEARLGVRLFERSTRRLSLT 60 MDNR GEMQVF+RV EAGS+SEAAR+LLMTPSTVSKLIGR+E RLGVRL ERSTRRLSLT Sbjct: 1 MDNRAGEMQVFVRVVEAGSFSEAARQLLMTPSTVSKLIGRMEDRLGVRLVERSTRRLSLT 60 Query: 61 SEGRTYQDKSVALLAELDSIERDISRGAATAGGTVRVNTTVAFGVLGLEPLLPAFWKAHP 120 EGR + ++S ALLA+LD IER+ISRGA AGGTVRVN +VAFGVLG+EP LP FW+ +P Sbjct: 61 DEGRLFYERSGALLADLDDIEREISRGAGGAGGTVRVNASVAFGVLGIEPHLPDFWRTYP 120 Query: 121 AIVVDISLSDEIVDMYLDRTDVAFRVGPLQASAMVARRIGVIKRRIVASPDYIDRLGKPE 180 +V+D+SLSDEIVD+YLDRTD+AFRVG L S ++ R+IGV RRIVASP Y++ G P Sbjct: 121 NVVIDLSLSDEIVDLYLDRTDIAFRVGALTDSNLLTRKIGVASRRIVASPAYLEAHGVPV 180 Query: 181 TVDDLSRHNCLGFNFRRSAPVWPLKESGRIVDRAISGSLLANNAQSLRRMAIAGIGLARL 240 ++DL HNCLGFNFRR+APVWPL+E+GRIVDR + G+LLANN +++RR+A+AG+GLARL Sbjct: 181 AIEDLDHHNCLGFNFRRAAPVWPLREAGRIVDRMVGGNLLANNGETVRRLALAGMGLARL 240 Query: 241 ADYHVRDDISAGRLVEVL-EGTAGDEEQIHALYHGGPRLPFRVRAFLEFMCPRLTDFMEG 299 AD+HVR+DI+ GRLVEVL + GDEE++HALY GG R+P R+R FL+FM PRL FM G Sbjct: 241 ADFHVREDIAEGRLVEVLGDAGHGDEEEVHALYLGGQRMPQRIRLFLDFMVPRLQAFMRG 300 >ref|ZP_06834637.1| transcriptional regulator, LysR family protein [Gluconacetobacter hansenii ATCC 23769] gb|EFG84129.1| transcriptional regulator, LysR family protein [Gluconacetobacter hansenii ATCC 23769] Length = 302 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 203/298 (68%), Positives = 247/298 (82%), Gaps = 1/298 (0%) Query: 1 MDNRVGEMQVFLRVAEAGSYSEAARRLLMTPSTVSKLIGRIEARLGVRLFERSTRRLSLT 60 MDNR GEMQVF+RVAEAGS+SEAAR LLMTPSTVSKLIGR+E RLGVRL ERSTRRLSLT Sbjct: 1 MDNRAGEMQVFVRVAEAGSFSEAARHLLMTPSTVSKLIGRMEERLGVRLIERSTRRLSLT 60 Query: 61 SEGRTYQDKSVALLAELDSIERDISRGAATAGGTVRVNTTVAFGVLGLEPLLPAFWKAHP 120 EGR + ++S ALLAEL+ IER++ GA A G VRV+ +V FGVLG+EPLLP FW+ +P Sbjct: 61 DEGRLFHERSAALLAELNDIEREVCHGAGGASGIVRVSASVPFGVLGIEPLLPEFWRTYP 120 Query: 121 AIVVDISLSDEIVDMYLDRTDVAFRVGPLQASAMVARRIGVIKRRIVASPDYIDRLGKPE 180 ++VD+SLSDEIVD+YLDRTD+AFRVGPL S+++AR+IGV +R+IVASPDY+ G P Sbjct: 121 NVIVDLSLSDEIVDLYLDRTDIAFRVGPLTDSSLLARKIGVARRQIVASPDYLKNHGTPI 180 Query: 181 TVDDLSRHNCLGFNFRRSAPVWPLKESGRIVDRAISGSLLANNAQSLRRMAIAGIGLARL 240 T+DDL+ HNCLGFNFRR+APVWPL+E RIVDR + GSLLANN +++RR+ +AG+GLARL Sbjct: 181 TIDDLNHHNCLGFNFRRAAPVWPLREGRRIVDRMVGGSLLANNGETVRRLVLAGVGLARL 240 Query: 241 ADYHVRDDISAGRLVEVL-EGTAGDEEQIHALYHGGPRLPFRVRAFLEFMCPRLTDFM 297 D+HVRDDI+ G LVEVL + GD E +HALY GG R+P R+R FL+FM PRL FM Sbjct: 241 GDFHVRDDIAHGHLVEVLADAGHGDAEDVHALYLGGQRMPQRIRLFLDFMVPRLQAFM 298 >ref|ZP_08664438.1| LysR family transcriptional regulator [Paracoccus sp. TRP] Length = 304 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/299 (64%), Positives = 245/299 (81%), Gaps = 1/299 (0%) Query: 1 MDNRVGEMQVFLRVAEAGSYSEAARRLLMTPSTVSKLIGRIEARLGVRLFERSTRRLSLT 60 MDNRVGEMQVFLRV + GS+SEAAR++LMTPSTVSKL+ RIEARLGVRL ERSTRRLS+T Sbjct: 1 MDNRVGEMQVFLRVVDTGSFSEAARQMLMTPSTVSKLVARIEARLGVRLLERSTRRLSVT 60 Query: 61 SEGRTYQDKSVALLAELDSIERDISRGAATAGGTVRVNTTVAFGVLGLEPLLPAFWKAHP 120 EGR Y ++S +LLAELD++E+D+S G A GT+RV +V FG++ +EPLLPAFW+ P Sbjct: 61 DEGRIYYERSQSLLAELDAVEQDLSHGMARISGTIRVTASVGFGMVAVEPLLPAFWQEFP 120 Query: 121 AIVVDISLSDEIVDMYLDRTDVAFRVGPLQASAMVARRIGVIKRRIVASPDYIDRLGKPE 180 IVVD+SLSDEIVD+Y+DRTDVAFRVG L S++ AR++G R+IVASPDY+ R G P Sbjct: 121 DIVVDLSLSDEIVDLYMDRTDVAFRVGTLANSSLTARKLGTAPRKIVASPDYLRRHGTPG 180 Query: 181 TVDDLSRHNCLGFNFRRSAPVWPLKESGRIVDRAISGSLLANNAQSLRRMAIAGIGLARL 240 T+ DL+ H+CLGFNFRRS PVWPL++SGRI+DR +SG LLANN +++RRMA+AG+GLA + Sbjct: 181 TIYDLAHHSCLGFNFRRSTPVWPLRDSGRILDRGVSGPLLANNGETVRRMALAGMGLAHM 240 Query: 241 ADYHVRDDISAGRLVEVL-EGTAGDEEQIHALYHGGPRLPFRVRAFLEFMCPRLTDFME 298 ++HVR+D+ +G LVEVL E GD E +HAL+ G R+P RVRAFL+FM PRL F+E Sbjct: 241 GEFHVREDLRSGALVEVLSEAVEGDTEDVHALFLGSERMPHRVRAFLDFMTPRLRSFLE 299