BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0025.p (310 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770901.1| hypothetical protein blr4261 [Bradyrhizobium ja... 487 e-135 ref|YP_001991383.1| hypothetical protein Rpal_2394 [Rhodopseudom... 415 e-114 ref|NP_947448.1| hypothetical protein RPA2103 [Rhodopseudomonas ... 413 e-113 ref|YP_001241457.1| hypothetical protein BBta_5592 [Bradyrhizobi... 413 e-113 ref|YP_620798.1| hypothetical protein Bcen_0916 [Burkholderia ce... 406 e-111 >ref|NP_770901.1| hypothetical protein blr4261 [Bradyrhizobium japonicum USDA 110] dbj|BAC49526.1| blr4261 [Bradyrhizobium japonicum USDA 110] Length = 310 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 265/310 (85%), Positives = 283/310 (91%) Query: 1 MKSTRILALLAFSAAIATAAPVTGKEVTKSKETVVAVAPQYDTTHVYVAPEDVDKFVTSF 60 MK TRILAL A +AA+AT+ P K+ TK ++ VAVAPQYDTTHVYV P+DVDKF SF Sbjct: 1 MKPTRILALFALAAAVATSTPAIAKDATKPRDAAVAVAPQYDTTHVYVTPDDVDKFAASF 60 Query: 61 LATFGGKSTKQVVATVTPTPSSTTSQLLQTPVGTVSLFGFKTPIPYPFGAERNGYLVNDM 120 LATFGGKSTKQVVATVTPTPSSTTSQLLQTP GTVSLFGFKTPIPYPFGAERNGYLV DM Sbjct: 61 LATFGGKSTKQVVATVTPTPSSTTSQLLQTPAGTVSLFGFKTPIPYPFGAERNGYLVADM 120 Query: 121 DEAIKAARAAGADVIVSTFPDPIGRDAVIQWPGGVNLQIYWHTTKPAYAAFERIPENRVY 180 DEAIKAARAAGADVIVSTFPDPIGRDAV+QWPGGVN+Q+YWHTTKP YA FERIPENRVY Sbjct: 121 DEAIKAARAAGADVIVSTFPDPIGRDAVVQWPGGVNMQLYWHTTKPDYAPFERIPENRVY 180 Query: 181 VSPDRVAAFTKSFVAFSRGKIISDDARAPGAEIGRSDATYRRIRIESGFGKMVVLVTDGH 240 VSPD+ AAFT+ F+AFSRGKI+SDDA+APG EIGR+DATY+RIRIES FGKMVVLVTDGH Sbjct: 181 VSPDKAAAFTRGFLAFSRGKIVSDDAKAPGVEIGRTDATYKRIRIESAFGKMVVLVTDGH 240 Query: 241 LPYPYGRETTGYEVADLAATLAKAKEAGATVLVEPYMSDGRSIAFVMFPGGYVAEIHSLA 300 LPYPYGRETTGYEVADLAATLAKAKE GATVLVEPY SDGRS AFVMFPGGY+AEIHSLA Sbjct: 241 LPYPYGRETTGYEVADLAATLAKAKETGATVLVEPYTSDGRSAAFVMFPGGYIAEIHSLA 300 Query: 301 PKSAARAGGK 310 KSAARA GK Sbjct: 301 EKSAARAAGK 310 >ref|YP_001991383.1| hypothetical protein Rpal_2394 [Rhodopseudomonas palustris TIE-1] gb|ACF00908.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 306 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/278 (76%), Positives = 238/278 (85%), Gaps = 1/278 (0%) Query: 19 AAPVTGKEVTKSKETVVAVAPQYDTTHVYVAPEDVDKFVTSFLATFGGKSTKQVVATVTP 78 ++PV KE ++ +V AVAPQYDTTHVYVAPEDVDKFV SFLATFGGKSTKQVVATVTP Sbjct: 18 SSPVAAKEARRASPSV-AVAPQYDTTHVYVAPEDVDKFVASFLATFGGKSTKQVVATVTP 76 Query: 79 TPSSTTSQLLQTPVGTVSLFGFKTPIPYPFGAERNGYLVNDMDEAIKAARAAGADVIVST 138 TPSSTTSQLLQTPVGTVSLFGFKTPIPYPFG ERNGYLV+D+D AI+ ARAAGA VIVST Sbjct: 77 TPSSTTSQLLQTPVGTVSLFGFKTPIPYPFGGERNGYLVSDIDVAIRQARAAGASVIVST 136 Query: 139 FPDPIGRDAVIQWPGGVNLQIYWHTTKPAYAAFERIPENRVYVSPDRVAAFTKSFVAFSR 198 FPDPIGRDAV+QWPGG+N+Q+YWHTTKP YAAF IPENRVYV+ DR AF +SFV FS Sbjct: 137 FPDPIGRDAVVQWPGGINIQLYWHTTKPDYAAFTSIPENRVYVAADRAEAFVRSFVKFSH 196 Query: 199 GKIISDDARAPGAEIGRSDATYRRIRIESGFGKMVVLVTDGHLPYPYGRETTGYEVADLA 258 G+I+S+ + A GAE+G++DA +RIRIES FGKM V VTDGHLPYPYG ETTGYEVADL Sbjct: 197 GRIVSESSAASGAEVGKADAKIKRIRIESAFGKMSVFVTDGHLPYPYGHETTGYEVADLD 256 Query: 259 ATLAKAKEAGATVLVEPYMSDGRSIAFVMFPGGYVAEI 296 AT+AKAKEAG TVLV PY + R A + FPGGYVAEI Sbjct: 257 ATIAKAKEAGVTVLVPPYSFEDRKAAMLQFPGGYVAEI 294 >ref|NP_947448.1| hypothetical protein RPA2103 [Rhodopseudomonas palustris CGA009] emb|CAE27544.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 306 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 212/278 (76%), Positives = 236/278 (84%), Gaps = 1/278 (0%) Query: 19 AAPVTGKEVTKSKETVVAVAPQYDTTHVYVAPEDVDKFVTSFLATFGGKSTKQVVATVTP 78 ++PV KE ++ +V AVAPQYDTTHVYVAP+DVD+F TSFLATFGGKSTKQVVATVTP Sbjct: 18 SSPVAAKEARRASPSV-AVAPQYDTTHVYVAPDDVDRFATSFLATFGGKSTKQVVATVTP 76 Query: 79 TPSSTTSQLLQTPVGTVSLFGFKTPIPYPFGAERNGYLVNDMDEAIKAARAAGADVIVST 138 TPSSTTSQLLQTPVGTVSLFGFKTPIPYPFG ERNGYLV D+D AI+ ARAAGA VIVST Sbjct: 77 TPSSTTSQLLQTPVGTVSLFGFKTPIPYPFGGERNGYLVRDIDVAIRQARAAGASVIVST 136 Query: 139 FPDPIGRDAVIQWPGGVNLQIYWHTTKPAYAAFERIPENRVYVSPDRVAAFTKSFVAFSR 198 FPDPIGRDAV+QWPGG+N+Q+YWHTTKP YAAF IPENRVYV+ DR AF +SFV FS Sbjct: 137 FPDPIGRDAVVQWPGGINMQLYWHTTKPDYAAFTSIPENRVYVAADRAEAFVRSFVKFSH 196 Query: 199 GKIISDDARAPGAEIGRSDATYRRIRIESGFGKMVVLVTDGHLPYPYGRETTGYEVADLA 258 G I+SD + A GAE+G++DA +RIRIES FGKM V VTDGHLPYPYG ETTGYEVADL Sbjct: 197 GGIVSDSSAASGAEVGKADAKIKRIRIESAFGKMSVFVTDGHLPYPYGHETTGYEVADLD 256 Query: 259 ATLAKAKEAGATVLVEPYMSDGRSIAFVMFPGGYVAEI 296 AT+AKAKEAG TVLV PY + R A + FPGGYVAEI Sbjct: 257 ATMAKAKEAGVTVLVPPYSFEDRKAAMLQFPGGYVAEI 294 >ref|YP_001241457.1| hypothetical protein BBta_5592 [Bradyrhizobium sp. BTAi1] gb|ABQ37551.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 296 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 207/267 (77%), Positives = 236/267 (88%) Query: 33 TVVAVAPQYDTTHVYVAPEDVDKFVTSFLATFGGKSTKQVVATVTPTPSSTTSQLLQTPV 92 +++ V QYDTTHVYVAP+DVDKFV SFLATFGG+STKQV+ATVTP PSSTTSQL+QTPV Sbjct: 28 SLIGVGAQYDTTHVYVAPDDVDKFVASFLATFGGQSTKQVIATVTPAPSSTTSQLVQTPV 87 Query: 93 GTVSLFGFKTPIPYPFGAERNGYLVNDMDEAIKAARAAGADVIVSTFPDPIGRDAVIQWP 152 GTVSLFGFKTPIPYPFGAER GYLVNDMD AIKAA+AAGADV+V+ FPDPIGRDAVIQWP Sbjct: 88 GTVSLFGFKTPIPYPFGAERTGYLVNDMDAAIKAAKAAGADVVVAPFPDPIGRDAVIQWP 147 Query: 153 GGVNLQIYWHTTKPAYAAFERIPENRVYVSPDRVAAFTKSFVAFSRGKIISDDARAPGAE 212 GGVN+Q+YWHTTKP+YAAF+ +PENRVYVSPDR AFT++F+ F++GK++SD+A+APG E Sbjct: 148 GGVNMQLYWHTTKPSYAAFQTVPENRVYVSPDRAEAFTRAFLRFAKGKVVSDEAKAPGVE 207 Query: 213 IGRSDATYRRIRIESGFGKMVVLVTDGHLPYPYGRETTGYEVADLAATLAKAKEAGATVL 272 IGR + YRRIRIES FG+M VLVTDGHLPYP+GRE TGYEVADL TL KAK G TVL Sbjct: 208 IGRPNGHYRRIRIESVFGRMTVLVTDGHLPYPFGREMTGYEVADLKTTLDKAKGTGVTVL 267 Query: 273 VEPYMSDGRSIAFVMFPGGYVAEIHSL 299 VEP+ SD R A V FPGGYVAEIH+L Sbjct: 268 VEPFTSDRREQALVQFPGGYVAEIHAL 294 >ref|YP_620798.1| hypothetical protein Bcen_0916 [Burkholderia cenocepacia AU 1054] ref|YP_835043.1| hypothetical protein Bcen2424_1398 [Burkholderia cenocepacia HI2424] gb|ABF75825.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054] gb|ABK08150.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424] Length = 304 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 208/308 (67%), Positives = 232/308 (75%), Gaps = 6/308 (1%) Query: 1 MKSTRILALLAFSAAIATAAPVT--GKEVTKSKETVVAVAPQYDTTHVYVAPEDVDKFVT 58 MKS R + L A A APVT V + VAV PQYDTTHV VAPED D+F Sbjct: 1 MKSVRSVLLAAMLAGGLAVAPVTFAKPPVPPAAVPTVAVGPQYDTTHVCVAPEDFDRFTD 60 Query: 59 SFLATFGGKSTKQVVATVTPTPSSTTSQLLQTPVGTVSLFGFKTPIPYPFGAERNGYLVN 118 SF+ATFGGK +KQ V VTPTPS T SQL+ TPVGT+S+FGFKTPIPYPF AER GYLV Sbjct: 61 SFVATFGGKKSKQGVFQVTPTPSQTMSQLVLTPVGTISVFGFKTPIPYPFCAERTGYLVT 120 Query: 119 DMDEAIKAARAAGADVIVSTFPDPIGRDAVIQWPGGVNLQIYWHTTKPAYAAFERIPENR 178 DMD A+K+AR GADVIV TFPDPIGRDA+I W GGVN+Q+YWHT P Y A + IPENR Sbjct: 121 DMDVAVKSAREHGADVIVDTFPDPIGRDAIITWAGGVNMQLYWHTQAPNYDALQTIPENR 180 Query: 179 VYVSPDRVAAFTKSFVAFSRGKIISDDARAPGAEIGRSDATYRRIRIESGFGKMVVLVTD 238 VYVSP V F FV FS+GK++SD+ +APG EIGR D TYRRIRIESGFGKM VLVTD Sbjct: 181 VYVSPQSVRKFVHDFVKFSKGKVVSDNPKAPGIEIGRPDDTYRRIRIESGFGKMTVLVTD 240 Query: 239 GHLPYPYGRETTGYEVADLAATLAKAKEAGATVLVEPYMSDGRSIAFVMFPGGYVAEIHS 298 GHLPYP+GRE TGYEVADLAATL +A+ AG TVLV P+ SDGR A V FPGGYVAEIH+ Sbjct: 241 GHLPYPFGREMTGYEVADLAATLKQAEAAGVTVLVPPFESDGRDAALVQFPGGYVAEIHT 300 Query: 299 LAPKSAAR 306 SAAR Sbjct: 301 ----SAAR 304