BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0023.p (223 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770903.1| hypothetical protein blr4263 [Bradyrhizobium ja... 366 1e-99 ref|YP_001207034.1| hypothetical protein BRADO5122 [Bradyrhizobi... 244 5e-63 ref|YP_001241455.1| hypothetical protein BBta_5590 [Bradyrhizobi... 234 9e-60 ref|YP_002947325.1| protein of unknown function DUF1275 [Variovo... 224 1e-56 ref|YP_002546333.1| Membrane Protein [Agrobacterium radiobacter ... 212 4e-53 >ref|NP_770903.1| hypothetical protein blr4263 [Bradyrhizobium japonicum USDA 110] dbj|BAC49528.1| blr4263 [Bradyrhizobium japonicum USDA 110] Length = 226 Score = 366 bits (940), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 197/226 (87%), Positives = 207/226 (91%), Gaps = 3/226 (1%) Query: 1 MSRHMLLLPLLMSLNAGFVDTAGYLALQGLFTAHVTGNFVTFGAAMVLGTSGALAKLLAL 60 M R++LLLPLLMSLNAG VDTAG+LALQGLFTAHVTGNFVTFGAA+VLGTSGALAKLLAL Sbjct: 1 MPRNILLLPLLMSLNAGLVDTAGFLALQGLFTAHVTGNFVTFGAAIVLGTSGALAKLLAL 60 Query: 61 PVFCLVVISTRLFSFFLPAIGLPIFRSMLALKVLLLAIGAVCAVRFGPFVQGDSWQAICT 120 PVFCLVVI+TR+FSF LPAIGLPIFRSMLA+KVLLLAIG CA FGPFVQGDSWQAI T Sbjct: 61 PVFCLVVITTRIFSFSLPAIGLPIFRSMLAIKVLLLAIGGACAAYFGPFVQGDSWQAIIT 120 Query: 121 GMILVAAMAIQNAAHRIHMGTEPPSTLMTGTTTQIMIDVADVLRGAPVPVLTVAKPRLGK 180 GMILVAAMAIQNAAHRIHMGTEPPSTLMTGTTTQIMIDVADVLRGAP VLTVAKPRLGK Sbjct: 121 GMILVAAMAIQNAAHRIHMGTEPPSTLMTGTTTQIMIDVADVLRGAPASVLTVAKPRLGK 180 Query: 181 MAANVTVFALGCAAGAVLYAKLGTWCFVIPPLVALPX---GAAEPK 223 MAA+VT FALGCAAGA LYAK GTWCFV+PPL+A P AAEPK Sbjct: 181 MAASVTAFALGCAAGACLYAKFGTWCFVLPPLIAFPAVFLAAAEPK 226 >ref|YP_001207034.1| hypothetical protein BRADO5122 [Bradyrhizobium sp. ORS 278] emb|CAL78817.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 229 Score = 244 bits (624), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 135/212 (63%), Positives = 165/212 (77%), Gaps = 9/212 (4%) Query: 7 LLPLLMSLNAGFVDTAGYLALQGLFTAHVTGNFVTFGAAMVLGTSGALAKLLALPVFCLV 66 ++PLL+S+NAG+VDTAG+LALQGLFTAHVTGNFVTFGAA+ LGTSGA+AKLLALPVFC+V Sbjct: 8 IVPLLLSVNAGYVDTAGFLALQGLFTAHVTGNFVTFGAALALGTSGAIAKLLALPVFCVV 67 Query: 67 VISTRLFSFFLPAIGLPIFRSMLALKVLLLAIGAVCAVRFGPFVQGDSWQAICTGMILVA 126 VI+TRL L +F ++ +K+LLL +GA A+ FGPF GDS +AI TGM+LVA Sbjct: 68 VIATRLTGTLLSRRWSRVFEILITVKLLLLILGAALAIHFGPFHNGDSHEAILTGMVLVA 127 Query: 127 AMAIQNAAHRIHMGTEPPSTLMTGTTTQIMIDVADVL----RGAPVPVLTVAKPRLGKMA 182 AMAIQNA HRIH+ T PPSTLMTGTTTQ+MID+AD + +G P RL +MA Sbjct: 128 AMAIQNAVHRIHLPTAPPSTLMTGTTTQVMIDIADKIYVGDKGQTPP-----PGRLVQMA 182 Query: 183 ANVTVFALGCAAGAVLYAKLGTWCFVIPPLVA 214 NV FALGC A A+L+ +LG+WCFVIPP+VA Sbjct: 183 INVAAFALGCGAAALLFVRLGSWCFVIPPIVA 214 >ref|YP_001241455.1| hypothetical protein BBta_5590 [Bradyrhizobium sp. BTAi1] gb|ABQ37549.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 229 Score = 234 bits (596), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 132/212 (62%), Positives = 163/212 (76%), Gaps = 9/212 (4%) Query: 7 LLPLLMSLNAGFVDTAGYLALQGLFTAHVTGNFVTFGAAMVLGTSGALAKLLALPVFCLV 66 ++PLL+S+NAG+VDTAG+LALQGLFTAHVTGNFVT GAA+ LGTSGA+AKLLALPVFC V Sbjct: 8 IVPLLLSVNAGYVDTAGFLALQGLFTAHVTGNFVTLGAALALGTSGAVAKLLALPVFCAV 67 Query: 67 VISTRLFSFFLPAIGLPIFRSMLALKVLLLAIGAVCAVRFGPFVQGDSWQAICTGMILVA 126 VI+TRL L F +L +K++LL +GA A+ FGPF +GDS +AI TGM+LVA Sbjct: 68 VIATRLTGTLLSRRWPRAFEILLGVKLVLLVLGAALAIHFGPFHEGDSREAIITGMVLVA 127 Query: 127 AMAIQNAAHRIHMGTEPPSTLMTGTTTQIMIDVADVL----RGAPVPVLTVAKPRLGKMA 182 AMAIQNA HRIH+ + PPSTLMTGTTTQ+MID+AD + +G P RL +MA Sbjct: 128 AMAIQNAVHRIHLPSAPPSTLMTGTTTQVMIDLADRIYVGDKGPAAP-----PARLVQMA 182 Query: 183 ANVTVFALGCAAGAVLYAKLGTWCFVIPPLVA 214 NV FALGC A A+L+ +LG+WCFV+PP+VA Sbjct: 183 VNVLAFALGCGAAALLFVRLGSWCFVVPPVVA 214 >ref|YP_002947325.1| protein of unknown function DUF1275 [Variovorax paradoxus S110] gb|ACS22059.1| protein of unknown function DUF1275 [Variovorax paradoxus S110] Length = 234 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 137/207 (66%), Positives = 166/207 (80%) Query: 8 LPLLMSLNAGFVDTAGYLALQGLFTAHVTGNFVTFGAAMVLGTSGALAKLLALPVFCLVV 67 LPLLMSLN GFVDTAG+LALQGLFTAHVTGNFVT GAA+V GTSGAL KL+ALPVFC VV Sbjct: 5 LPLLMSLNGGFVDTAGFLALQGLFTAHVTGNFVTIGAALVHGTSGALTKLVALPVFCAVV 64 Query: 68 ISTRLFSFFLPAIGLPIFRSMLALKVLLLAIGAVCAVRFGPFVQGDSWQAICTGMILVAA 127 + R LPA+GLP+ R+ML LK LLLA GA A+ +GPF DS A+ TGM LV+A Sbjct: 65 VLARWLGHGLPALGLPVLRTMLVLKTLLLAAGAAFAICYGPFKDSDSGLAMLTGMSLVSA 124 Query: 128 MAIQNAAHRIHMGTEPPSTLMTGTTTQIMIDVADVLRGAPVPVLTVAKPRLGKMAANVTV 187 MAIQNA HR+H+G+ PP+TLMTGTTTQ+MID+AD+LRG + VA+ RL +MAA+V V Sbjct: 125 MAIQNAVHRLHLGSAPPTTLMTGTTTQVMIDIADLLRGLAPEEVAVARARLRRMAASVAV 184 Query: 188 FALGCAAGAVLYAKLGTWCFVIPPLVA 214 FA GCAA A++Y++L WCFV+PP++A Sbjct: 185 FATGCAAAALIYSQLNVWCFVVPPVLA 211 >ref|YP_002546333.1| Membrane Protein [Agrobacterium radiobacter K84] gb|ACM28399.1| Membrane Protein [Agrobacterium radiobacter K84] Length = 227 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 131/208 (62%), Positives = 157/208 (75%) Query: 8 LPLLMSLNAGFVDTAGYLALQGLFTAHVTGNFVTFGAAMVLGTSGALAKLLALPVFCLVV 67 LP L+S+N G+VDTAG+LAL GLFTAHVTGNFVTF AAMVLGTSGA AKLLALPVFC+VV Sbjct: 5 LPTLLSINGGYVDTAGFLALHGLFTAHVTGNFVTFAAAMVLGTSGAAAKLLALPVFCMVV 64 Query: 68 ISTRLFSFFLPAIGLPIFRSMLALKVLLLAIGAVCAVRFGPFVQGDSWQAICTGMILVAA 127 I RL L LP+ +L L LLLA+ AV + FGPFV GD WQAI TGM LV+A Sbjct: 65 ILARLLGGELSRRNLPVLPVILMLNFLLLALAAVFTLGFGPFVSGDGWQAILTGMTLVSA 124 Query: 128 MAIQNAAHRIHMGTEPPSTLMTGTTTQIMIDVADVLRGAPVPVLTVAKPRLGKMAANVTV 187 MA+QNA HR+H+GT PP+T+MTGTTTQIMID+AD+LRG AK RLG+M A + Sbjct: 125 MAVQNALHRVHLGTAPPTTMMTGTTTQIMIDIADLLRGVEPEAKAAAKARLGRMGATLGG 184 Query: 188 FALGCAAGAVLYAKLGTWCFVIPPLVAL 215 F GCAA A+L+ +G CF++PP++AL Sbjct: 185 FVFGCAAAALLFLLIGVACFIVPPVLAL 212