BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0007.p (367 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001889898.1| major facilitator superfamily protein [Burkh... 240 2e-61 ref|YP_002907575.1| major facilitator superfamily protein [Burkh... 240 3e-61 ref|YP_003778007.1| transmembrane arabinose efflux transmembrane... 216 6e-54 ref|YP_002980068.1| major facilitator superfamily protein [Ralst... 215 9e-54 ref|YP_001897674.1| major facilitator superfamily protein [Ralst... 215 1e-53 >ref|YP_001889898.1| major facilitator superfamily protein [Burkholderia phytofirmans PsJN] gb|ACD20527.1| major facilitator superfamily MFS_1 [Burkholderia phytofirmans PsJN] Length = 408 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 164/361 (45%), Positives = 239/361 (66%), Gaps = 4/361 (1%) Query: 1 MIAGLLPALARDLNVGLPAAGHLVTAFSLAYAIGAPVMAVLTAGLERGRLLIVAMGGFAL 60 MI+ LLP LA DL+V + AG LVT F+LAY + +PV+ L+ L R LL+ +M FAL Sbjct: 30 MISPLLPGLAADLSVKIETAGQLVTVFALAYGLSSPVLTALSGNLNRRTLLLASMIAFAL 89 Query: 61 GNLLAALAPDYAGLLAARLLLALSAASFMPAASGYAAALGGPERRGRALSTITTGLTLAI 120 N+LA +AP++ L+ AR+LLALSA ++P A+ A+A+ PERRGRA++ + G+T+AI Sbjct: 90 SNVLAMVAPNFWALMGARVLLALSAGLYVPGANALASAIVPPERRGRAIAVVNGGITIAI 149 Query: 121 IAGVPLGVLVGQGFGWRATFFGVAGLSVFSLLGILIWLPRQR-PGV-TAGLGERLALAKR 178 GVPLG +VG GWR TF GVAGL++ + G+++ LPR G+ A L ER+A+ + Sbjct: 150 ALGVPLGAVVGHALGWRMTFAGVAGLAMLAAAGLVVGLPRDIGAGIPVATLRERIAVGRN 209 Query: 179 RDILGVLVTSVLTVAGTFTVYTYLSFFIAGVAGLGPQALAPVLLGFGLASAVGTQLSGSA 238 +L L+T+ L G +TVYTYLS F+A V GL + V+ +GLA+A G G+A Sbjct: 210 PVVLATLLTTTLWATGAYTVYTYLSPFLASVTGLAGAQIGMVMFMWGLAAAAGVVTGGNA 269 Query: 239 ADRWGARSIVIVGGGLALLAYLAFSLSAA-LEPARAMLVLLPAILIWGFASWGLITAQQA 297 +DR+G ++++ L+ LA+ S+SA L PA A++ +L AI +WG A W AQQA Sbjct: 270 SDRFGPLAVIVPTIALSGLAFAMLSISARFLSPAAALIPVLVAIALWGVAHWAFYPAQQA 329 Query: 298 RLVALAP-ALAPISLSMNSSAIYLGSAMGAAAGAVVISNGAMERLGWVAAGFALAALLSV 356 RL+ +A +API LS+N+S +Y+G ++GAA GA+ +++G + LGWVAA LAA+L Sbjct: 330 RLIDIAGLKVAPIVLSLNASFMYIGFSLGAALGALTLAHGGVGSLGWVAAASELAAVLLT 389 Query: 357 L 357 L Sbjct: 390 L 390 >ref|YP_002907575.1| major facilitator superfamily protein [Burkholderia glumae BGR1] gb|ACR32725.1| Major facilitator superfamily protein [Burkholderia glumae BGR1] Length = 419 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 150/349 (42%), Positives = 223/349 (63%), Gaps = 10/349 (2%) Query: 1 MIAGLLPALARDLNVGLPAAGHLVTAFSLAYAIGAPVMAVLTAGLERGRLLIVAMGGFAL 60 M+AGLLP +A+DL++ L AAG LVT FSL+YAI +P++ ++AG+ R R LIVA+ F Sbjct: 29 MLAGLLPIIAKDLSISLAAAGQLVTVFSLSYAISSPILTTVSAGVSRRRFLIVALLCFTA 88 Query: 61 GNLLAALAPDYAGLLAARLLLALSAASFMPAASGYAAALGGPERRGRALSTITTGLTLAI 120 N A +P Y LLAAR+LLA+SA +MP+A+ A +L PERRGRAL+T+ G+T+A+ Sbjct: 89 ANFAACASPGYLSLLAARVLLAVSAGLYMPSANALAGSLVAPERRGRALATVHGGITIAV 148 Query: 121 IAGVPLGVLVGQGFGWRATFFGVAGLSVFSLLGILIWLPRQRPGVTA-----GLGERLAL 175 GVPLG +G FGWRATF G+ LS LG+L LP G+ A L +R+A+ Sbjct: 149 ALGVPLGAWIGGHFGWRATFAGIGMLSAIVTLGVLTGLPH---GIGASLSVPSLSQRIAV 205 Query: 176 AKRRDILGVLVTSVLTVAGTFTVYTYLSFFIAGVAGLGPQALAPVLLGFGLASAVGTQLS 235 ++ +L L+ + L G +T+Y YL+ F+ G G + VLL +G+ + +G +S Sbjct: 206 GRQPAVLVTLLITTLWATGIWTIYPYLAPFLTGSPGFSDAEVGAVLLLYGVFAGIGVFVS 265 Query: 236 GSAADRWGARSIVIVGGGLALLAYLAFSLSA-ALEPARAMLVLLPAILIWGFASWGLITA 294 G A DR G+ ++IV + +L+Y + + SA L+P A + +L AI WG A W A Sbjct: 266 GRAIDRLGSGKVLIVCLVVMMLSYESLTASALHLDPVPARVAILIAIGAWGAAGWAFNPA 325 Query: 295 QQARLVALAP-ALAPISLSMNSSAIYLGSAMGAAAGAVVISNGAMERLG 342 QQA+L+ +A +AP+SLS+NSS YLG A+GAA G+++++ ++ +G Sbjct: 326 QQAKLIGIAGLDVAPVSLSLNSSFTYLGFALGAALGSLIVAYSSVANIG 374 >ref|YP_003778007.1| transmembrane arabinose efflux transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ66099.1| transmembrane arabinose efflux transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 403 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 140/357 (39%), Positives = 217/357 (60%), Gaps = 3/357 (0%) Query: 1 MIAGLLPALARDLNVGLPAAGHLVTAFSLAYAIGAPVMAVLTAGLERGRLLIVAMGGFAL 60 MIA LLP +A D + +P LV F+L A+ +P+ VL+A + R R+LI AM F Sbjct: 42 MIAPLLPRMAADFGMSVPMVASLVVIFTLVLALSSPISTVLSAAMNRRRVLIAAMTAFTA 101 Query: 61 GNLLAALAPDYAGLLAARLLLALSAASFMPAASGYAAALGGPERRGRALSTITTGLTLAI 120 NLLAA + + GLL ARLL+A++A + P AS A A+ P +RGRAL+ ++ G+T Sbjct: 102 ANLLAACSSSFTGLLVARLLMAVAAGLYTPNASALAGAMVAPGQRGRALAIVSGGMTSPS 161 Query: 121 IAGVPLGVLVGQGFGWRATFFGVAGLSVFSLLGILIWLPRQRPG--VTAGLGERLALAKR 178 G+PLG +VG FGWRATF V+ + +L GIL+ +PRQ AGL ER+A+ + Sbjct: 162 ALGLPLGAVVGHAFGWRATFLAVSAMGAVALAGILLGVPRQAGAHLHVAGLRERMAVIGQ 221 Query: 179 RDILGVLVTSVLTVAGTFTVYTYLSFFIAGVAGLGPQALAPVLLGFGLASAVGTQLSGSA 238 + +L ++L G + Y Y++ +++ V G ++ + +G A+AVG + G+ Sbjct: 222 PQVQRLLAVTLLWSVGAYAAYPYIAPYLSHVLSFGESRISLTVSLWGAAAAVGVSVGGTL 281 Query: 239 ADRWGARSIVIVGGGLALLAYLAFSLSAALEPARAMLVLLPAILIWGFASWGLITAQQAR 298 DR+G+ +V V L +L++ + + AL P A+ +L A+++WGF+ W AQ AR Sbjct: 282 NDRYGSARVVRVSLLLLMLSFWTLAAATALPPPLALGPVLLAVVVWGFSVWAFFPAQMAR 341 Query: 299 LV-ALAPALAPISLSMNSSAIYLGSAMGAAAGAVVISNGAMERLGWVAAGFALAALL 354 L+ A APA AP++LS+N+S +YLG ++G+AAGA ++ +GA+ +G A AL A L Sbjct: 342 LIGAGAPAQAPVALSLNTSTLYLGFSLGSAAGAGILGSGAIWGIGLFAGACALVAWL 398 >ref|YP_002980068.1| major facilitator superfamily protein [Ralstonia pickettii 12D] gb|ACS61396.1| major facilitator superfamily MFS_1 [Ralstonia pickettii 12D] Length = 398 Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 153/345 (44%), Positives = 210/345 (60%), Gaps = 3/345 (0%) Query: 1 MIAGLLPALARDLNVGLPAAGHLVTAFSLAYAIGAPVMAVLTAGLERGRLLIVAMGGFAL 60 MIAGLLP LA DL V +PAAG LVT F++ YA+G+P MA L +R R+LI A+ FA Sbjct: 21 MIAGLLPVLAADLGVSVPAAGQLVTVFAITYAVGSPAMATLLGNFDRRRVLIGALAIFAA 80 Query: 61 GNLLAALAPDYAGLLAARLLLALSAASFMPAASGYAAALGGPERRGRALSTITTGLTLAI 120 GNLLAA A + L+AAR+LLAL+A F+P A+ A +L R G AL+ IT G T+A+ Sbjct: 81 GNLLAATAHGFGQLMAARVLLALAAGVFLPTANAVATSLVPASRSGSALAVITGGGTVAV 140 Query: 121 IAGVPLGVLVGQGFGWRATFFGVAGLSVFSLLGILIWLPRQRPGVTAGLGERLALAKRRD 180 GVPLG + WR+TF LS + G+ LPR P L +RL++A+R Sbjct: 141 ALGVPLGAWIAAQGDWRSTFIACGVLSALATAGLAFGLPRDLPHSVTTLAQRLSVARRPG 200 Query: 181 ILGVLVTSVLTVAGTFTVYTYLS-FFIAGVAGLGPQALAPVLLGFGLASAVGTQLSGSAA 239 +LG L S L AG FT YTY++ FF+ G+ G PQ + VL G +A+GT L G Sbjct: 201 MLGALAVSTLWAAGGFTFYTYVAPFFVQGL-GFVPQHVGIVLFLVGSFAALGTGLGGHMT 259 Query: 240 DRWGARSIVIVGGGLALLAYLAFSLSAA-LEPARAMLVLLPAILIWGFASWGLITAQQAR 298 DR G ++ V +LA+ SLSA L A V + A+++WG A WG AQ R Sbjct: 260 DRAGVARVLAVSSAGIVLAFSVLSLSAQVLHGTAASAVAIGAVVLWGMAGWGFGPAQATR 319 Query: 299 LVALAPALAPISLSMNSSAIYLGSAMGAAAGAVVISNGAMERLGW 343 L+ LAP ++PI+LS+++SA+Y+G A+G+ GA+ +++G LGW Sbjct: 320 LIRLAPDVSPITLSLHASAVYVGIALGSGVGALALAHGGPGMLGW 364 >ref|YP_001897674.1| major facilitator superfamily protein [Ralstonia pickettii 12J] ref|ZP_07674865.1| transporter, major facilitator family [Ralstonia sp. 5_7_47FAA] gb|ACD25242.1| major facilitator superfamily MFS_1 [Ralstonia pickettii 12J] gb|EFP66790.1| transporter, major facilitator family [Ralstonia sp. 5_7_47FAA] Length = 398 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 154/345 (44%), Positives = 212/345 (61%), Gaps = 3/345 (0%) Query: 1 MIAGLLPALARDLNVGLPAAGHLVTAFSLAYAIGAPVMAVLTAGLERGRLLIVAMGGFAL 60 MIAGLLP LA DL V +PAAG LVT F++ YA+G+PVMA L ++R R+LI A+ FA Sbjct: 21 MIAGLLPVLAADLGVSVPAAGQLVTVFAVTYAVGSPVMATLLGNVDRRRVLIGALAIFAA 80 Query: 61 GNLLAALAPDYAGLLAARLLLALSAASFMPAASGYAAALGGPERRGRALSTITTGLTLAI 120 GNLLAA A + L+AAR+LLAL+A F+P A+ A +L R G AL+ IT G T+A+ Sbjct: 81 GNLLAATAHGFGQLMAARVLLALAAGVFLPTANAVATSLVPASRSGSALAIITGGGTVAV 140 Query: 121 IAGVPLGVLVGQGFGWRATFFGVAGLSVFSLLGILIWLPRQRPGVTAGLGERLALAKRRD 180 GVPLG + WR+TF LS + G+ LPR P L +RL++A+R Sbjct: 141 ALGVPLGAWIAAQGDWRSTFIACGVLSALATAGLAFGLPRALPHSVTTLAQRLSVARRTG 200 Query: 181 ILGVLVTSVLTVAGTFTVYTYLS-FFIAGVAGLGPQALAPVLLGFGLASAVGTQLSGSAA 239 +LG L S L AG FT YTY++ FF+ G+ G PQ + VL G +A+GT L G Sbjct: 201 MLGALAVSALWAAGGFTFYTYVAPFFVQGL-GFAPQHVGIVLFLVGSFAALGTGLGGHLT 259 Query: 240 DRWGARSIVIVGGGLALLAYLAFSLSAA-LEPARAMLVLLPAILIWGFASWGLITAQQAR 298 DR G ++ V +LA+ SLSA L A V + A+++WG A WG AQ R Sbjct: 260 DRAGVARVLAVSSAGIVLAFSVLSLSAQVLHGTVAGAVAIGAVVLWGMAGWGFGPAQATR 319 Query: 299 LVALAPALAPISLSMNSSAIYLGSAMGAAAGAVVISNGAMERLGW 343 L+ LAP ++PI+LS+++SA+Y G A+G++ GA+ +++G LGW Sbjct: 320 LIRLAPDVSPITLSLHASAVYAGIALGSSVGALALAHGGPGMLGW 364