BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0005.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774318.1| transcriptional regulator [Bradyrhizobium japon... 573 e-161 ref|YP_001632750.1| AraC family transcriptional regulator [Borde... 443 e-122 ref|YP_004534356.1| AraC family transcriptional regulator [Novos... 416 e-114 ref|YP_001890638.1| AraC family transcriptional regulator [Burkh... 389 e-106 ref|YP_001860412.1| AraC family transcriptional regulator [Burkh... 389 e-106 >ref|NP_774318.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC52943.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 324 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/302 (97%), Positives = 297/302 (98%) Query: 1 MDVFSEANTFLGSADRYETVLVAAHRNPLRASNGICMVADLTFEEAAGGFDIVLVAGTPT 60 MDVFSEANTFLGSA RYETVLVAAHRNPLRASNGI MVADLTF+EAAGGFDIVLVAGTPT Sbjct: 23 MDVFSEANTFLGSAYRYETVLVAAHRNPLRASNGIRMVADLTFDEAAGGFDIVLVAGTPT 82 Query: 61 PPEAEPESSLLQWVKELPWRSSVYGSICTGAFVLGYAGLLDDRRVTTHWQDAQALVARFP 120 PPEAEPE LLQWVKELPWRSSVYGSICTGAFVLGYAGLLDDRRVTTHWQDAQAL ARFP Sbjct: 83 PPEAEPEPCLLQWVKELPWRSSVYGSICTGAFVLGYAGLLDDRRVTTHWQDAQALAARFP 142 Query: 121 KAKVEPDLIYVRDGRLITAAGVTAGIDLGLALVGQRHGAETALKVAKRLVVVAQRQGGQS 180 KAKVEPDLIYVRDGRLITAAGVTAGIDLGLALVGQRHGAETALKVAKRLVVVAQRQGGQS Sbjct: 143 KAKVEPDLIYVRDGRLITAAGVTAGIDLGLALVGQRHGAETALKVAKRLVVVAQRQGGQS 202 Query: 181 QFSPYLTAPADPESPIARIQDHVMANIGDRHTLESLAAVVGMSPRNLARHFGQVTGTTPH 240 QFSPYLTAPADPESPIARIQDHVMANIGDRHTLESLAAVVGMSPRNLARHFGQVTGTTPH Sbjct: 203 QFSPYLTAPADPESPIARIQDHVMANIGDRHTLESLAAVVGMSPRNLARHFGQVTGTTPH 262 Query: 241 DFIERARVDAARMMLEASDRPLKAIAFDCGFGSADRMRIVFSTRLGVTPVQYRASFRRAE 300 +FIERAR+DAARMMLEASDRPLKAIAFDCGFGSADRMRIVFSTRLGVTPVQYRASFRRAE Sbjct: 263 EFIERARIDAARMMLEASDRPLKAIAFDCGFGSADRMRIVFSTRLGVTPVQYRASFRRAE 322 Query: 301 PQ 302 PQ Sbjct: 323 PQ 324 >ref|YP_001632750.1| AraC family transcriptional regulator [Bordetella petrii DSM 12804] emb|CAP44482.1| transcriptional regulator, AraC-family [Bordetella petrii] Length = 327 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 212/302 (70%), Positives = 250/302 (82%) Query: 1 MDVFSEANTFLGSADRYETVLVAAHRNPLRASNGICMVADLTFEEAAGGFDIVLVAGTPT 60 +DVF EAN +L DRYETVLVAA R P RASN + ++ADL+FEEA FDI+LVAG P Sbjct: 24 VDVFHEANGYLPPQDRYETVLVAADRGPFRASNRMQILADLSFEEAGAAFDILLVAGGPA 83 Query: 61 PPEAEPESSLLQWVKELPWRSSVYGSICTGAFVLGYAGLLDDRRVTTHWQDAQALVARFP 120 P+A+P++ + W++ R+ +YG+ICTGAF+LG+AGLLD RRVTTHWQ+A L ARFP Sbjct: 84 LPDAKPDARFVAWLRAATQRAGIYGAICTGAFILGHAGLLDHRRVTTHWQNASTLAARFP 143 Query: 121 KAKVEPDLIYVRDGRLITAAGVTAGIDLGLALVGQRHGAETALKVAKRLVVVAQRQGGQS 180 +A+VEPD IYVRD RL+T+AGVTAGIDL LALV Q HG E A+ VAKRLVVVAQRQGGQS Sbjct: 144 RAQVEPDAIYVRDDRLVTSAGVTAGIDLALALVSQHHGTEIAVAVAKRLVVVAQRQGGQS 203 Query: 181 QFSPYLTAPADPESPIARIQDHVMANIGDRHTLESLAAVVGMSPRNLARHFGQVTGTTPH 240 QFSPYLTAPADP SP+ARIQ HVM +IG RHTLESLAA VGMSPRNLAR+F Q G TPH Sbjct: 204 QFSPYLTAPADPVSPVARIQAHVMTHIGQRHTLESLAAEVGMSPRNLARYFVQEAGMTPH 263 Query: 241 DFIERARVDAARMMLEASDRPLKAIAFDCGFGSADRMRIVFSTRLGVTPVQYRASFRRAE 300 +F++RAR+DAARMMLEAS+RPLK +A++CGFG+ DRMRIVFS RLGVTP QYRASFR+ Sbjct: 264 EFVQRARIDAARMMLEASERPLKTVAYECGFGTVDRMRIVFSERLGVTPAQYRASFRQRS 323 Query: 301 PQ 302 Q Sbjct: 324 VQ 325 >ref|YP_004534356.1| AraC family transcriptional regulator [Novosphingobium sp. PP1Y] emb|CCA92538.1| AraC family transcriptional regulator [Novosphingobium sp. PP1Y] Length = 325 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 200/300 (66%), Positives = 239/300 (79%) Query: 1 MDVFSEANTFLGSADRYETVLVAAHRNPLRASNGICMVADLTFEEAAGGFDIVLVAGTPT 60 +DVF+E N F+ RYET+LVA R PLRASN + ++ DL+F EA FD+VLVAG P Sbjct: 23 IDVFAETNGFVSPEGRYETLLVARDRAPLRASNNMQLLPDLSFHEAQSPFDLVLVAGGPD 82 Query: 61 PPEAEPESSLLQWVKELPWRSSVYGSICTGAFVLGYAGLLDDRRVTTHWQDAQALVARFP 120 P EP+ + W++E+P R++VYGSICTGAF LG+AGLLD RRVTTHWQ A L FP Sbjct: 83 LPHVEPDLEMTAWLREMPTRAAVYGSICTGAFALGHAGLLDGRRVTTHWQIAAKLAEAFP 142 Query: 121 KAKVEPDLIYVRDGRLITAAGVTAGIDLGLALVGQRHGAETALKVAKRLVVVAQRQGGQS 180 A+VEPDLIYV DG LIT+AGVTAGIDL LALV Q HGA A+ VAKRLVV+AQRQGGQS Sbjct: 143 SARVEPDLIYVSDGPLITSAGVTAGIDLALALVRQHHGASVAVAVAKRLVVLAQRQGGQS 202 Query: 181 QFSPYLTAPADPESPIARIQDHVMANIGDRHTLESLAAVVGMSPRNLARHFGQVTGTTPH 240 QFSPYL+APADP+S IAR+Q+HV+ N+G RHTL+SLA GMSPRNLAR F + TG TPH Sbjct: 203 QFSPYLSAPADPQSAIARLQNHVILNVGQRHTLQSLAEASGMSPRNLARQFVRETGITPH 262 Query: 241 DFIERARVDAARMMLEASDRPLKAIAFDCGFGSADRMRIVFSTRLGVTPVQYRASFRRAE 300 +F+ERAR+DAARM+LEA+ PLK++AFDCGFG+ADRMRI F+ RLGVTP QYR SF+ E Sbjct: 263 EFVERARIDAARMLLEATRLPLKSVAFDCGFGTADRMRIAFAARLGVTPAQYRQSFQADE 322 >ref|YP_001890638.1| AraC family transcriptional regulator [Burkholderia phytofirmans PsJN] gb|ACD21267.1| transcriptional regulator, AraC family [Burkholderia phytofirmans PsJN] Length = 319 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 190/299 (63%), Positives = 230/299 (76%) Query: 1 MDVFSEANTFLGSADRYETVLVAAHRNPLRASNGICMVADLTFEEAAGGFDIVLVAGTPT 60 +DVFSEAN F+ AD YE L++A PLRASNG+ ++AD TF +A G FD+ LVAG P Sbjct: 21 VDVFSEANRFIAPADAYEVKLISAEAAPLRASNGMMLIADATFGQARGPFDLALVAGGPA 80 Query: 61 PPEAEPESSLLQWVKELPWRSSVYGSICTGAFVLGYAGLLDDRRVTTHWQDAQALVARFP 120 P+ PE+ LL+W+ + + YGSICTGAF LG+AGLLDDR VTTHWQ A L A+FP Sbjct: 81 LPDTAPEAPLLEWLANVATQCGRYGSICTGAFALGHAGLLDDRNVTTHWQHAAQLAAQFP 140 Query: 121 KAKVEPDLIYVRDGRLITAAGVTAGIDLGLALVGQRHGAETALKVAKRLVVVAQRQGGQS 180 KA+V+ D IY+RDG+L+T+AGVTAGIDL LALV + HG TAL VAKRLVV AQRQGGQS Sbjct: 141 KARVDFDRIYLRDGQLVTSAGVTAGIDLSLALVAEDHGPHTALAVAKRLVVFAQRQGGQS 200 Query: 181 QFSPYLTAPADPESPIARIQDHVMANIGDRHTLESLAAVVGMSPRNLARHFGQVTGTTPH 240 QFSPYLTAPAD SP+A++Q HVM I + +++ LA V GMS RN AR F Q TG TPH Sbjct: 201 QFSPYLTAPADDTSPVAKVQAHVMERIRESFSVKQLAEVAGMSARNFARVFVQETGVTPH 260 Query: 241 DFIERARVDAARMMLEASDRPLKAIAFDCGFGSADRMRIVFSTRLGVTPVQYRASFRRA 299 +F+ERARVDAAR +LE+S LKAIA+DCGFG+ADRMRIVF+ R+G TP+QYR FR A Sbjct: 261 EFVERARVDAARKLLESSGAALKAIAYDCGFGTADRMRIVFTKRIGATPMQYRERFRSA 319 >ref|YP_001860412.1| AraC family transcriptional regulator [Burkholderia phymatum STM815] gb|ACC73366.1| transcriptional regulator, AraC family [Burkholderia phymatum STM815] Length = 319 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 189/299 (63%), Positives = 228/299 (76%) Query: 1 MDVFSEANTFLGSADRYETVLVAAHRNPLRASNGICMVADLTFEEAAGGFDIVLVAGTPT 60 DVF+EAN F+ DRYE L+AA PLRASNGI +V D TF++ FD+ L+AG P Sbjct: 21 FDVFAEANLFIDGNDRYEVTLLAADNAPLRASNGIRLVPDETFDDRHSTFDLALIAGGPA 80 Query: 61 PPEAEPESSLLQWVKELPWRSSVYGSICTGAFVLGYAGLLDDRRVTTHWQDAQALVARFP 120 PE P++ + W+ + R YGSICTGAF LG+AGLLDDR VTTHWQ AQ L +FP Sbjct: 81 LPEVAPDTRVTAWLANVASRCKRYGSICTGAFALGHAGLLDDRNVTTHWQHAQQLATQFP 140 Query: 121 KAKVEPDLIYVRDGRLITAAGVTAGIDLGLALVGQRHGAETALKVAKRLVVVAQRQGGQS 180 KA+V+ D IY+RD RL+T+AGVTAGIDL LALV + HG +TALKVAKRLVV +QRQGGQS Sbjct: 141 KARVDFDRIYLRDERLVTSAGVTAGIDLALALVTEDHGPQTALKVAKRLVVFSQRQGGQS 200 Query: 181 QFSPYLTAPADPESPIARIQDHVMANIGDRHTLESLAAVVGMSPRNLARHFGQVTGTTPH 240 QFSPYLTAPAD SP+A++Q HVMANI +++ LA V GMS RN AR F Q TG TPH Sbjct: 201 QFSPYLTAPADETSPVAKVQTHVMANIQHNFSVKQLADVAGMSARNFARIFVQGTGVTPH 260 Query: 241 DFIERARVDAARMMLEASDRPLKAIAFDCGFGSADRMRIVFSTRLGVTPVQYRASFRRA 299 +F+ERAR+DAAR +LE+SD LKAIA+DCGFG+ADRMRIVF+ R+G TP QYR FR+A Sbjct: 261 EFVERARMDAARKLLESSDAALKAIAYDCGFGTADRMRIVFTRRIGATPAQYRERFRQA 319