BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0039.p (366 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768271.1| GDP-mannose 4,6-dehydratase [Bradyrhizobium jap... 653 0.0 ref|NP_772105.1| GDP-mannose 4,6-dehydratase [Bradyrhizobium jap... 646 0.0 ref|YP_001241571.1| GDP-mannose 4,6-dehydratase [Bradyrhizobium ... 640 0.0 ref|YP_485146.1| GDP-mannose 4,6-dehydratase [Rhodopseudomonas p... 631 e-179 ref|YP_318991.1| GDP-mannose 4,6-dehydratase [Nitrobacter winogr... 630 e-179 >ref|NP_768271.1| GDP-mannose 4,6-dehydratase [Bradyrhizobium japonicum USDA 110] dbj|BAC46896.1| GDP-mannose 4,6-dehydratase [Bradyrhizobium japonicum USDA 110] Length = 372 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/363 (86%), Positives = 330/363 (90%) Query: 4 KDSAAQDSKRRVALITGVTGQDGAYLAEYLLGLGYTVHGLKRRSSSLNTARVDHLYQDPH 63 K ++SK RVALITGVTGQDGAYLAEYLL LGY VHG+KRRSSS NTARVDHLYQDPH Sbjct: 10 KTMTVRNSKGRVALITGVTGQDGAYLAEYLLSLGYVVHGIKRRSSSFNTARVDHLYQDPH 69 Query: 64 VGNVPFLMHYGDMTDSTNLIRLVQQIRPTEIYNLAAQSHVQVSFESPEYTANADAIGVLR 123 VGNVPFLMHYGDMTDSTNLIRLVQQIRPTEIYNLAAQSHV VSFESPEYTANADAIGVLR Sbjct: 70 VGNVPFLMHYGDMTDSTNLIRLVQQIRPTEIYNLAAQSHVAVSFESPEYTANADAIGVLR 129 Query: 124 LLEAIRILGMEKEARFYQASTSELYGLVQEVPQKETTPFYPRSPYGVAKLYGYWITVNYR 183 LLEAIRILGMEKE RFYQASTSELYGLVQE+PQKETTPFYPRSPYGVAKLYGYWITVNYR Sbjct: 130 LLEAIRILGMEKETRFYQASTSELYGLVQEIPQKETTPFYPRSPYGVAKLYGYWITVNYR 189 Query: 184 EAYGMFASNGILFNHESPIRGETFVTRKITRAVARIEVGLENKLYLGNLDAKRDWGHARD 243 EAYGMFASNGILFNHESPIRGETFVTRKITR VARIEVGLE LYLGNL+AKRDWGHARD Sbjct: 190 EAYGMFASNGILFNHESPIRGETFVTRKITRGVARIEVGLEQTLYLGNLEAKRDWGHARD 249 Query: 244 YVEGMHRILQVDEPGDFVLATGETRSVREFVELAFAEVGRSIEWRGKGVEEVGVDKASGN 303 YVEGMH+ILQ D+P DFVLATGE RSVRE VEL+FA VGR I WRGKGVEE GVD+ SG Sbjct: 250 YVEGMHKILQADKPDDFVLATGEMRSVREMVELSFAHVGRRIAWRGKGVEETGVDETSGK 309 Query: 304 TLVQIDPTYFRPTEVDLLIGDASKARAKLGWTPKTPFAQLVKEMVASDLVEARQDAANGK 363 +V+IDPTYFRPTEVDLL+GDASKAR LGWTPK FAQLV+EM+ SDL E ++DAA+GK Sbjct: 310 IVVKIDPTYFRPTEVDLLVGDASKAREVLGWTPKRSFAQLVEEMMTSDLAETKRDAASGK 369 Query: 364 HGV 366 V Sbjct: 370 RTV 372 >ref|NP_772105.1| GDP-mannose 4,6-dehydratase [Bradyrhizobium japonicum USDA 110] dbj|BAC50730.1| GDP-mannose 4,6-dehydratase [Bradyrhizobium japonicum USDA 110] Length = 356 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/353 (87%), Positives = 326/353 (92%) Query: 14 RVALITGVTGQDGAYLAEYLLGLGYTVHGLKRRSSSLNTARVDHLYQDPHVGNVPFLMHY 73 R+ALITGVTGQDGAYLAEYLL LGY VHG+KRRSSS NTARVDHLYQDPHVGNVPFLMHY Sbjct: 4 RIALITGVTGQDGAYLAEYLLSLGYVVHGIKRRSSSFNTARVDHLYQDPHVGNVPFLMHY 63 Query: 74 GDMTDSTNLIRLVQQIRPTEIYNLAAQSHVQVSFESPEYTANADAIGVLRLLEAIRILGM 133 GDMTDSTNLIRLVQQIRPTEIYNLAAQSHV VSFESPEYTANADAIGVLRLLEAIRILGM Sbjct: 64 GDMTDSTNLIRLVQQIRPTEIYNLAAQSHVAVSFESPEYTANADAIGVLRLLEAIRILGM 123 Query: 134 EKEARFYQASTSELYGLVQEVPQKETTPFYPRSPYGVAKLYGYWITVNYREAYGMFASNG 193 EKE RFYQASTSELYGLVQE+PQKETTPFYPRSPYGVAKLYGYWITVNYREAYGMFASNG Sbjct: 124 EKETRFYQASTSELYGLVQEIPQKETTPFYPRSPYGVAKLYGYWITVNYREAYGMFASNG 183 Query: 194 ILFNHESPIRGETFVTRKITRAVARIEVGLENKLYLGNLDAKRDWGHARDYVEGMHRILQ 253 ILFNHESPIRGETFVTRKITR VARIEVGLE+ LYLGNL+AKRDWGHA+DYVEGMH ILQ Sbjct: 184 ILFNHESPIRGETFVTRKITRGVARIEVGLEDTLYLGNLEAKRDWGHAKDYVEGMHMILQ 243 Query: 254 VDEPGDFVLATGETRSVREFVELAFAEVGRSIEWRGKGVEEVGVDKASGNTLVQIDPTYF 313 D+P DFVLATGETRSVRE VEL+FA+VGR I WRG GVEE GVD SG T+V+IDPTYF Sbjct: 244 ADKPDDFVLATGETRSVREMVELSFAQVGRRIAWRGAGVEETGVDAKSGKTVVKIDPTYF 303 Query: 314 RPTEVDLLIGDASKARAKLGWTPKTPFAQLVKEMVASDLVEARQDAANGKHGV 366 RPTEVDLLIGDASKAR LGW PK FAQLV+EM+ASDL +A++DAA+ K V Sbjct: 304 RPTEVDLLIGDASKAREVLGWKPKRSFAQLVEEMMASDLAQAKRDAAHDKRSV 356 >ref|YP_001241571.1| GDP-mannose 4,6-dehydratase [Bradyrhizobium sp. BTAi1] gb|ABQ37665.1| GDP-mannose 4,6-dehydratase (GDP-D-mannose dehydratase) [Bradyrhizobium sp. BTAi1] Length = 361 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/358 (85%), Positives = 323/358 (90%) Query: 7 AAQDSKRRVALITGVTGQDGAYLAEYLLGLGYTVHGLKRRSSSLNTARVDHLYQDPHVGN 66 A +D RVALITGVTGQDGAYLAEYLLGLGYTVHG+KRRSSS NT RVDHLYQDPH GN Sbjct: 2 AGKDCSGRVALITGVTGQDGAYLAEYLLGLGYTVHGIKRRSSSFNTGRVDHLYQDPHEGN 61 Query: 67 VPFLMHYGDMTDSTNLIRLVQQIRPTEIYNLAAQSHVQVSFESPEYTANADAIGVLRLLE 126 VPFL+H+GDMTDSTNLIRLVQQIRP EIYNLAAQSHV VSFESPEYTANADA+GVLRLLE Sbjct: 62 VPFLLHHGDMTDSTNLIRLVQQIRPDEIYNLAAQSHVGVSFESPEYTANADALGVLRLLE 121 Query: 127 AIRILGMEKEARFYQASTSELYGLVQEVPQKETTPFYPRSPYGVAKLYGYWITVNYREAY 186 AIRILGMEK+ RFYQASTSELYGLVQE+PQ+ETTPFYPRSPYG AKLYGYWITVNYREAY Sbjct: 122 AIRILGMEKQTRFYQASTSELYGLVQEIPQRETTPFYPRSPYGCAKLYGYWITVNYREAY 181 Query: 187 GMFASNGILFNHESPIRGETFVTRKITRAVARIEVGLENKLYLGNLDAKRDWGHARDYVE 246 GMFA NGILFNHESPIRGETFVTRKITR VARIE GLE +YLGNL+AKRDWGHARDYVE Sbjct: 182 GMFACNGILFNHESPIRGETFVTRKITRGVARIEAGLEEAIYLGNLEAKRDWGHARDYVE 241 Query: 247 GMHRILQVDEPGDFVLATGETRSVREFVELAFAEVGRSIEWRGKGVEEVGVDKASGNTLV 306 GMHRILQ D P DFVLATGET SVRE VELAFAEV R IEWRG+GVEE G+D SG +V Sbjct: 242 GMHRILQADVPDDFVLATGETHSVRELVELAFAEVDRRIEWRGEGVEETGIDCRSGKAVV 301 Query: 307 QIDPTYFRPTEVDLLIGDASKARAKLGWTPKTPFAQLVKEMVASDLVEARQDAANGKH 364 +IDP YFRPTEVDLLIGD SKAR KLGWTPKT FAQLVKEMVASDLV AR++AA G + Sbjct: 302 RIDPNYFRPTEVDLLIGDCSKARDKLGWTPKTSFAQLVKEMVASDLVAARREAARGSN 359 >ref|YP_485146.1| GDP-mannose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] gb|ABD06235.1| GDP-mannose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] Length = 360 Score = 631 bits (1627), Expect = e-179, Method: Compositional matrix adjust. Identities = 294/359 (81%), Positives = 329/359 (91%) Query: 8 AQDSKRRVALITGVTGQDGAYLAEYLLGLGYTVHGLKRRSSSLNTARVDHLYQDPHVGNV 67 A S +RVALITGVTGQDGAYLAEYLLGLGYTVHG+KRRSSS NT R+DHLYQD H NV Sbjct: 2 ANPSSKRVALITGVTGQDGAYLAEYLLGLGYTVHGVKRRSSSFNTGRIDHLYQDRHAANV 61 Query: 68 PFLMHYGDMTDSTNLIRLVQQIRPTEIYNLAAQSHVQVSFESPEYTANADAIGVLRLLEA 127 PFL+HYGDMTD+TNLIRL+Q+I+P EIYNLAAQSHV VSFESPEYTAN+DAIGVLRLLEA Sbjct: 62 PFLLHYGDMTDATNLIRLIQEIQPDEIYNLAAQSHVAVSFESPEYTANSDAIGVLRLLEA 121 Query: 128 IRILGMEKEARFYQASTSELYGLVQEVPQKETTPFYPRSPYGVAKLYGYWITVNYREAYG 187 IRILGMEK+ RFYQASTSELYGLVQ++PQ E TPFYPRSPY VAKLYGYWITVNYREAYG Sbjct: 122 IRILGMEKKTRFYQASTSELYGLVQQIPQTEKTPFYPRSPYAVAKLYGYWITVNYREAYG 181 Query: 188 MFASNGILFNHESPIRGETFVTRKITRAVARIEVGLENKLYLGNLDAKRDWGHARDYVEG 247 MFASNGILFNHESPIRGETFVTRKITR++ARIE+G+EN LYLGNLDAKRDWGHA+DY+EG Sbjct: 182 MFASNGILFNHESPIRGETFVTRKITRSIARIELGVENCLYLGNLDAKRDWGHAKDYIEG 241 Query: 248 MHRILQVDEPGDFVLATGETRSVREFVELAFAEVGRSIEWRGKGVEEVGVDKASGNTLVQ 307 MH+ILQ EP DFVLATGETRSVREFVE+AF+E+GRSIEW+G+G++E+G+DKAS +V+ Sbjct: 242 MHKILQASEPDDFVLATGETRSVREFVEVAFSELGRSIEWQGQGLDEIGIDKASNKVVVR 301 Query: 308 IDPTYFRPTEVDLLIGDASKARAKLGWTPKTPFAQLVKEMVASDLVEARQDAANGKHGV 366 ID YFRPTEV+LLIGDA+KAR KLGWTPKT FA+LVKEMVASDL AR++A NGK V Sbjct: 302 IDANYFRPTEVELLIGDATKAREKLGWTPKTTFAELVKEMVASDLAIARREAENGKSAV 360 >ref|YP_318991.1| GDP-mannose 4,6-dehydratase [Nitrobacter winogradskyi Nb-255] gb|ABA05639.1| GDP-mannose 4,6-dehydratase [Nitrobacter winogradskyi Nb-255] Length = 361 Score = 630 bits (1626), Expect = e-179, Method: Compositional matrix adjust. Identities = 302/360 (83%), Positives = 326/360 (90%) Query: 7 AAQDSKRRVALITGVTGQDGAYLAEYLLGLGYTVHGLKRRSSSLNTARVDHLYQDPHVGN 66 +A + RRVALITGVTGQDGAYLAEYLLGLGY VHG+KRRSSS NTAR+DHLY+DPH G+ Sbjct: 2 SAGGATRRVALITGVTGQDGAYLAEYLLGLGYIVHGIKRRSSSFNTARIDHLYEDPHKGD 61 Query: 67 VPFLMHYGDMTDSTNLIRLVQQIRPTEIYNLAAQSHVQVSFESPEYTANADAIGVLRLLE 126 V FL+HYGDMTDSTNLIRL+QQIRPTEIYNLAAQSHV VSFESPEYTANADAIGVLRLLE Sbjct: 62 VRFLLHYGDMTDSTNLIRLMQQIRPTEIYNLAAQSHVAVSFESPEYTANADAIGVLRLLE 121 Query: 127 AIRILGMEKEARFYQASTSELYGLVQEVPQKETTPFYPRSPYGVAKLYGYWITVNYREAY 186 AIRILGMEKE RFYQASTSELYGLVQEVPQKETTPFYPRSPY VAKLYGYWITVNYREAY Sbjct: 122 AIRILGMEKETRFYQASTSELYGLVQEVPQKETTPFYPRSPYAVAKLYGYWITVNYREAY 181 Query: 187 GMFASNGILFNHESPIRGETFVTRKITRAVARIEVGLENKLYLGNLDAKRDWGHARDYVE 246 GM+ASNGILFNHESPIRGETFVTRK+TR+VARIE GLE LYLGNLDAKRDWGHARDYVE Sbjct: 182 GMYASNGILFNHESPIRGETFVTRKVTRSVARIEAGLEQCLYLGNLDAKRDWGHARDYVE 241 Query: 247 GMHRILQVDEPGDFVLATGETRSVREFVELAFAEVGRSIEWRGKGVEEVGVDKASGNTLV 306 GMH ILQ D P DFVLATGETR+VREFVE+AF EVGR IEWRGKGVEEVGVD SG +V Sbjct: 242 GMHLILQADGPDDFVLATGETRAVREFVEIAFQEVGRRIEWRGKGVEEVGVDIKSGQIVV 301 Query: 307 QIDPTYFRPTEVDLLIGDASKARAKLGWTPKTPFAQLVKEMVASDLVEARQDAANGKHGV 366 +IDP YFRPTEVDLL+GDA+KAR LGW PKT FA LV+EMVA+DL A+++A G++ V Sbjct: 302 RIDPQYFRPTEVDLLVGDAAKARENLGWRPKTSFATLVREMVAADLAIAKREAVGGQNAV 361