BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0038.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207164.1| transcriptional regulator [Bradyrhizobium sp... 365 3e-99 ref|YP_001241572.1| transcriptional regulator [Bradyrhizobium sp... 361 4e-98 ref|ZP_08630818.1| transcriptional regulator, Crp/Fnr family [Br... 357 6e-97 ref|NP_772601.1| transcriptional regulator [Bradyrhizobium japon... 346 1e-93 ref|ZP_07673762.1| cyclic nucleotide-binding protein [Ralstonia ... 284 7e-75 >ref|YP_001207164.1| transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL78947.1| putative transcriptional regulator with cAMP binding domain belongs to HTH Crp family [Bradyrhizobium sp. ORS 278] Length = 224 Score = 365 bits (937), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 175/224 (78%), Positives = 199/224 (88%) Query: 1 MIAADYLRRIAAWSRELSEQEIEIARAGISEKSYRANEFIFMRGDNFQYWTGIVTGLARM 60 MIA+D L RIA WSR L +EI++A AG+ E+S+ ANE IF+RGD F+YWTGIVTGLARM Sbjct: 1 MIASDTLLRIAPWSRHLKPEEIDVAAAGVVERSFAANEHIFLRGDQFEYWTGIVTGLARM 60 Query: 61 GIVSRGGKAASFAGLTAGAWFGEGTVLKNEPRRYDVVALRDTRLAMMDRRTFVWLFENSV 120 VSR GKA +FAG++AGAWFGEG+VLKNEPRRYDVVALRDTR A+M+R TF+WLFENSV Sbjct: 61 STVSRSGKATTFAGMSAGAWFGEGSVLKNEPRRYDVVALRDTRAALMERPTFMWLFENSV 120 Query: 121 GFNRFLVGSLNERLGQFIALLEYGRTLDATARLARSIASLFNPILYPDLTLHLEITQEEI 180 GFNRFLV LNERLGQFI L+E GRTLDATARLARSIASLFNPILYP+ T HLEITQEEI Sbjct: 121 GFNRFLVTQLNERLGQFIGLVEVGRTLDATARLARSIASLFNPILYPNTTRHLEITQEEI 180 Query: 181 GALSGISRQNANQCLKRLEREGLLRLDYGGVTILNLDRLRHYGE 224 GALSG+SRQNANQCLK LEREGLLR++YGGVT+L+LDRLR YG+ Sbjct: 181 GALSGLSRQNANQCLKTLEREGLLRVEYGGVTVLDLDRLRCYGD 224 >ref|YP_001241572.1| transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ37666.1| putative transcriptional regulator with cAMP binding domain belongs to HTH Crp family [Bradyrhizobium sp. BTAi1] Length = 224 Score = 361 bits (927), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 173/224 (77%), Positives = 199/224 (88%) Query: 1 MIAADYLRRIAAWSRELSEQEIEIARAGISEKSYRANEFIFMRGDNFQYWTGIVTGLARM 60 MI++D L RIA WSR L +EI+ A AGI E+S+ ANE IF+RGD F YWTGIV+GLARM Sbjct: 1 MISSDTLLRIAPWSRHLKPEEIDAASAGIVERSFAANEHIFLRGDQFDYWTGIVSGLARM 60 Query: 61 GIVSRGGKAASFAGLTAGAWFGEGTVLKNEPRRYDVVALRDTRLAMMDRRTFVWLFENSV 120 VSRGGKA +FAG++AGAWFGEG+VLKNEPRRYDVVALRDTR A+M+R+TF+WLFENSV Sbjct: 61 STVSRGGKATTFAGMSAGAWFGEGSVLKNEPRRYDVVALRDTRAALMERQTFMWLFENSV 120 Query: 121 GFNRFLVGSLNERLGQFIALLEYGRTLDATARLARSIASLFNPILYPDLTLHLEITQEEI 180 GFNRFLV LNERLGQFI L+E GRTLDATARLARSIA+LFNPILYP+ T HLEITQEEI Sbjct: 121 GFNRFLVTQLNERLGQFIGLVEVGRTLDATARLARSIAALFNPILYPNTTRHLEITQEEI 180 Query: 181 GALSGISRQNANQCLKRLEREGLLRLDYGGVTILNLDRLRHYGE 224 GALSG+SRQNANQCLK LER+GLLR++YGGVT+L+LDRLR YG+ Sbjct: 181 GALSGLSRQNANQCLKTLERDGLLRVEYGGVTVLDLDRLRCYGD 224 >ref|ZP_08630818.1| transcriptional regulator, Crp/Fnr family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06350.1| transcriptional regulator, Crp/Fnr family [Bradyrhizobiaceae bacterium SG-6C] Length = 224 Score = 357 bits (917), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 171/224 (76%), Positives = 196/224 (87%) Query: 1 MIAADYLRRIAAWSRELSEQEIEIARAGISEKSYRANEFIFMRGDNFQYWTGIVTGLARM 60 MI A+ L+RIA WSR L+++E E+ARAG+ EKS+ ANEFI MRGD+F+YW G+V+GL R+ Sbjct: 1 MITAEQLKRIAVWSRGLTDKETEVARAGVVEKSFSANEFICMRGDHFEYWMGVVSGLVRI 60 Query: 61 GIVSRGGKAASFAGLTAGAWFGEGTVLKNEPRRYDVVALRDTRLAMMDRRTFVWLFENSV 120 G SR GKA SF G+T GAWFGEGTVLKNE RRYD VALRDTRLA+MDR TF+WLFENSV Sbjct: 61 GTGSRDGKAVSFTGMTNGAWFGEGTVLKNEARRYDAVALRDTRLALMDRATFMWLFENSV 120 Query: 121 GFNRFLVGSLNERLGQFIALLEYGRTLDATARLARSIASLFNPILYPDLTLHLEITQEEI 180 FNRFLVG LNERLGQF+ L+EYGR LDA ARLARSIASLFNPILYPD T HLEITQEE+ Sbjct: 121 AFNRFLVGLLNERLGQFMGLVEYGRMLDAKARLARSIASLFNPILYPDHTRHLEITQEEL 180 Query: 181 GALSGISRQNANQCLKRLEREGLLRLDYGGVTILNLDRLRHYGE 224 GA+SGISRQNANQCLK LE+EGLLRL+YGGVT+++LDRLR YGE Sbjct: 181 GAISGISRQNANQCLKTLEKEGLLRLEYGGVTVVDLDRLRGYGE 224 >ref|NP_772601.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC51226.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 224 Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 169/224 (75%), Positives = 196/224 (87%) Query: 1 MIAADYLRRIAAWSRELSEQEIEIARAGISEKSYRANEFIFMRGDNFQYWTGIVTGLARM 60 MI+ D L+RIAAWSREL++ EIE+ARAGI+E+SY E +FMRGD F YW G+V GLARM Sbjct: 1 MISEDQLKRIAAWSRELTQAEIEVARAGITERSYGIGEAVFMRGDTFGYWAGMVFGLARM 60 Query: 61 GIVSRGGKAASFAGLTAGAWFGEGTVLKNEPRRYDVVALRDTRLAMMDRRTFVWLFENSV 120 G VSR GK AS AGLTAGAWFGEG+VLKNEPRRYDVVALR++R+A+M+R F+WLFENSV Sbjct: 61 GGVSRDGKEASLAGLTAGAWFGEGSVLKNEPRRYDVVALRNSRVALMERSAFMWLFENSV 120 Query: 121 GFNRFLVGSLNERLGQFIALLEYGRTLDATARLARSIASLFNPILYPDLTLHLEITQEEI 180 GFNRFLV LNERLGQFI +LE RTLDAT+RLAR IASLFNPILYP+ T HLEITQEEI Sbjct: 121 GFNRFLVRQLNERLGQFIGMLEVNRTLDATSRLARGIASLFNPILYPESTAHLEITQEEI 180 Query: 181 GALSGISRQNANQCLKRLEREGLLRLDYGGVTILNLDRLRHYGE 224 GALSG+SRQNAN+ L RLE+EGLLRL+YGGVTIL+++RLR YG+ Sbjct: 181 GALSGMSRQNANRALNRLEKEGLLRLEYGGVTILDIERLRGYGD 224 >ref|ZP_07673762.1| cyclic nucleotide-binding protein [Ralstonia sp. 5_7_47FAA] gb|EFP67966.1| cyclic nucleotide-binding protein [Ralstonia sp. 5_7_47FAA] Length = 234 Score = 284 bits (726), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 138/217 (63%), Positives = 166/217 (76%) Query: 7 LRRIAAWSRELSEQEIEIARAGISEKSYRANEFIFMRGDNFQYWTGIVTGLARMGIVSRG 66 L IAAWS +L E + A AGI EK+Y I + + WTG+VTGL ++G VS Sbjct: 17 LAHIAAWSIDLHPDEADRACAGIVEKTYARGACICPKNTLLESWTGVVTGLIKIGTVSPE 76 Query: 67 GKAASFAGLTAGAWFGEGTVLKNEPRRYDVVALRDTRLAMMDRRTFVWLFENSVGFNRFL 126 G++ +F G+ AG WFGEGTVLKNEPRRYD+VALRDTR+A MDR TF+WL ENSV FNRFL Sbjct: 77 GRSVTFTGVPAGGWFGEGTVLKNEPRRYDIVALRDTRMAFMDRATFMWLVENSVAFNRFL 136 Query: 127 VGSLNERLGQFIALLEYGRTLDATARLARSIASLFNPILYPDLTLHLEITQEEIGALSGI 186 V LNERLG F+ALLEY R LD T RLAR IASLFNP+LYP HLEITQEE+G LSG+ Sbjct: 137 VKQLNERLGHFMALLEYDRLLDVTPRLARCIASLFNPVLYPGAGDHLEITQEELGLLSGM 196 Query: 187 SRQNANQCLKRLEREGLLRLDYGGVTILNLDRLRHYG 223 +RQ ANQ LK LE++G++RL+YGGVT+++LDRLR YG Sbjct: 197 TRQVANQSLKALEKDGVVRLEYGGVTVVDLDRLRSYG 233