BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0033.p (450 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_568704.1| putative branched-chain amino acid ABC transpor... 750 0.0 ref|YP_004110590.1| ABC transporter substrate-binding protein [R... 748 0.0 ref|YP_534023.1| putative branched-chain amino acid ABC transpor... 735 0.0 ref|NP_772606.1| ABC transporter substrate-binding protein [Brad... 723 0.0 ref|NP_949381.1| branched chain amino-acid ABC transporter subst... 723 0.0 >ref|YP_568704.1| putative branched-chain amino acid ABC transport system substrate-binding protein [Rhodopseudomonas palustris BisB5] gb|ABE38803.1| putative branched-chain amino acid ABC transport system substrate-binding protein [Rhodopseudomonas palustris BisB5] Length = 426 Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/452 (81%), Positives = 400/452 (88%), Gaps = 28/452 (6%) Query: 1 MTIRSLLSSVSVALLISSAAATAQAQIAIGHLQDLSGGTSDVGTPYGQGVADTFAWVNKN 60 MT+++LLS+ S+AL+I++ +ATAQAQIAIGHL D SGGTSDVGTPYGQ VADTFAWVNKN Sbjct: 1 MTMKTLLSTASLALVIATVSATAQAQIAIGHLADYSGGTSDVGTPYGQAVADTFAWVNKN 60 Query: 61 GGIGGKQLNVDSNDYGYQVPRAIK--KKGITVDCLPLADVPVAGADAVIGNRAYGTEPGK 118 GG+ GKQLNVDSNDYGYQVPRAI KK +G D K Sbjct: 61 GGVAGKQLNVDSNDYGYQVPRAIALYKK-------------WSGGD-------------K 94 Query: 119 VAAIMGWGTADTEALTGFLAQDKIPDISGSYAAALTDPQGTSGKAKPAPYNFFYGPSYSD 178 VAAIMGWGTADTEALTGFLAQDKIPD+SGSYAAALTDP+GTSGKAKPAPYNFFYGPSYSD Sbjct: 95 VAAIMGWGTADTEALTGFLAQDKIPDMSGSYAAALTDPEGTSGKAKPAPYNFFYGPSYSD 154 Query: 179 SMRAMLTWAAEDWKAKGKPGKPKFVHMGANHPYPNAPKAAGEALATELGFEVLPPLVFAL 238 ++RA L WAAEDWKAKGK G PKFVHMGANHPYPNAPKAAGEALA ELGFEVLPPLVFAL Sbjct: 155 ALRAELMWAAEDWKAKGKSGAPKFVHMGANHPYPNAPKAAGEALAKELGFEVLPPLVFAL 214 Query: 239 SPGDYSAQCLSLKSSGANYAYLGNTAASNISVLKACKTAGVDVQFLGNVWGMDENAAKTA 298 +PGDYSAQCLSLKSSGANYAYLGNTAASNISV+KACK AGVDVQF+ NVWGMDENAAKTA Sbjct: 215 APGDYSAQCLSLKSSGANYAYLGNTAASNISVMKACKAAGVDVQFMSNVWGMDENAAKTA 274 Query: 299 GDAADGVIFPLRTAVSWGGNAPGMKTVMEISKMSDPSGKVYRPVHYIAAVCSALYLKEAL 358 GDAADGVIFPLRTAV+WGGNAPGMKTV E+SK+SD +G VYRPVHY+AAVCSALY+KEA+ Sbjct: 275 GDAADGVIFPLRTAVAWGGNAPGMKTVEEVSKISDSTGNVYRPVHYVAAVCSALYMKEAI 334 Query: 359 DWAAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWTEKDHRPTTKVDLYRSKISGAT 418 +WAAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWT+KDHR T KVDLYRSK++G T Sbjct: 335 EWAAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWTDKDHRGTMKVDLYRSKVTGPT 394 Query: 419 DGDINDLMGKGTIKLEKVKTVDLPRKPEWFGW 450 DGDI DL+ KGTIKLEKVKTVDLPRKPEWFGW Sbjct: 395 DGDIKDLIAKGTIKLEKVKTVDLPRKPEWFGW 426 >ref|YP_004110590.1| ABC transporter substrate-binding protein [Rhodopseudomonas palustris DX-1] gb|ADU45857.1| ABC transporter substrate-binding protein [Rhodopseudomonas palustris DX-1] Length = 426 Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/452 (81%), Positives = 398/452 (88%), Gaps = 28/452 (6%) Query: 1 MTIRSLLSSVSVALLISSAAATAQAQIAIGHLQDLSGGTSDVGTPYGQGVADTFAWVNKN 60 M I++LL + S+AL+++ A+ATAQAQIAIGHL D SGGTSDVGTPYGQ VADTFAWVNKN Sbjct: 1 MNIKTLLGTASLALMLAGASATAQAQIAIGHLADYSGGTSDVGTPYGQAVADTFAWVNKN 60 Query: 61 GGIGGKQLNVDSNDYGYQVPRAIK--KKGITVDCLPLADVPVAGADAVIGNRAYGTEPGK 118 GGIGGKQLNVD+NDYGYQVPRAI KK +G D K Sbjct: 61 GGIGGKQLNVDTNDYGYQVPRAIALYKK-------------WSGGD-------------K 94 Query: 119 VAAIMGWGTADTEALTGFLAQDKIPDISGSYAAALTDPQGTSGKAKPAPYNFFYGPSYSD 178 VAAIMGWGTADTEALTGFLA DKIPD+SGSYAAALTDP+G+SGKAKPAPYNFFYGPSYSD Sbjct: 95 VAAIMGWGTADTEALTGFLANDKIPDMSGSYAAALTDPEGSSGKAKPAPYNFFYGPSYSD 154 Query: 179 SMRAMLTWAAEDWKAKGKPGKPKFVHMGANHPYPNAPKAAGEALATELGFEVLPPLVFAL 238 ++RA L WAAEDWKAKGKPG PKFVHMGANHPYPNAPKAAGEA+A ELGFEVLPPLVFAL Sbjct: 155 ALRAELMWAAEDWKAKGKPGAPKFVHMGANHPYPNAPKAAGEAMAKELGFEVLPPLVFAL 214 Query: 239 SPGDYSAQCLSLKSSGANYAYLGNTAASNISVLKACKTAGVDVQFLGNVWGMDENAAKTA 298 +PGDYSAQCLSLKSSGANYAYLGNTAASNISV+KACK AGVDVQF+ NVWGMDENAAKTA Sbjct: 215 APGDYSAQCLSLKSSGANYAYLGNTAASNISVMKACKAAGVDVQFMSNVWGMDENAAKTA 274 Query: 299 GDAADGVIFPLRTAVSWGGNAPGMKTVMEISKMSDPSGKVYRPVHYIAAVCSALYLKEAL 358 GDAADGVIFPLRTAV+WGGNAPGMKTV EISKMSDPSG VYRPVHY+AAVCSA+Y+KEAL Sbjct: 275 GDAADGVIFPLRTAVAWGGNAPGMKTVEEISKMSDPSGNVYRPVHYVAAVCSAMYMKEAL 334 Query: 359 DWAAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWTEKDHRPTTKVDLYRSKISGAT 418 DWAAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWT KDHR T K+DLYR+K+SG T Sbjct: 335 DWAAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWTAKDHRGTMKIDLYRAKLSGPT 394 Query: 419 DGDINDLMGKGTIKLEKVKTVDLPRKPEWFGW 450 DGD+ DL+ KGTIKLEKVKTVDLPRKPEW GW Sbjct: 395 DGDLKDLIAKGTIKLEKVKTVDLPRKPEWAGW 426 >ref|YP_534023.1| putative branched-chain amino acid ABC transport system substrate-binding protein [Rhodopseudomonas palustris BisB18] gb|ABD89704.1| putative branched-chain amino acid ABC transport system substrate-binding protein [Rhodopseudomonas palustris BisB18] Length = 438 Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/450 (80%), Positives = 396/450 (88%), Gaps = 24/450 (5%) Query: 1 MTIRSLLSSVSVALLISSAAATAQAQIAIGHLQDLSGGTSDVGTPYGQGVADTFAWVNKN 60 MT++SLLS+ S+AL+I+ A AQAQIAIGHL D SGGTSDVGTPYGQGVADTFAWVNK+ Sbjct: 13 MTMKSLLSTASLALVIAGFGAGAQAQIAIGHLADYSGGTSDVGTPYGQGVADTFAWVNKH 72 Query: 61 GGIGGKQLNVDSNDYGYQVPRAIKKKGITVDCLPLADVPVAGADAVIGNRAYGTEPGKVA 120 GG+GGKQLNVD+NDYGYQVPRAI + + G++ KVA Sbjct: 73 GGVGGKQLNVDTNDYGYQVPRAI----------------------ALYKKWSGSD--KVA 108 Query: 121 AIMGWGTADTEALTGFLAQDKIPDISGSYAAALTDPQGTSGKAKPAPYNFFYGPSYSDSM 180 AIMGWGTADTEALTGFLA DKIPD+SGSYAAALTDP G SGKAKPAPYNFFYGPSYSD++ Sbjct: 109 AIMGWGTADTEALTGFLANDKIPDLSGSYAAALTDPLGASGKAKPAPYNFFYGPSYSDAL 168 Query: 181 RAMLTWAAEDWKAKGKPGKPKFVHMGANHPYPNAPKAAGEALATELGFEVLPPLVFALSP 240 RA LTWAAEDWKAKGK GKPKFVHMGANHPYPNAPKAAGEA+ATELGF+VLPPLVFAL+P Sbjct: 169 RAELTWAAEDWKAKGKSGKPKFVHMGANHPYPNAPKAAGEAMATELGFDVLPPLVFALAP 228 Query: 241 GDYSAQCLSLKSSGANYAYLGNTAASNISVLKACKTAGVDVQFLGNVWGMDENAAKTAGD 300 GDYSAQCLSLKS+GANYAYLGNTAASNISV+KACKTAGVDVQF+ NVWGMDENAAKTAGD Sbjct: 229 GDYSAQCLSLKSAGANYAYLGNTAASNISVMKACKTAGVDVQFMSNVWGMDENAAKTAGD 288 Query: 301 AADGVIFPLRTAVSWGGNAPGMKTVMEISKMSDPSGKVYRPVHYIAAVCSALYLKEALDW 360 AADGVIFPLRTAV WGG+APGMKTV EISK+SDP+G VYRPVHYIA VCSALY+KEALDW Sbjct: 289 AADGVIFPLRTAVGWGGDAPGMKTVQEISKISDPTGNVYRPVHYIAGVCSALYMKEALDW 348 Query: 361 AAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWTEKDHRPTTKVDLYRSKISGATDG 420 AA NGGATGENVAKGFYQKKDWVPAGM+GVCNPSTWT+KDHR T V+LYRS++SG TDG Sbjct: 349 AAANGGATGENVAKGFYQKKDWVPAGMEGVCNPSTWTDKDHRGTLTVNLYRSRVSGPTDG 408 Query: 421 DINDLMGKGTIKLEKVKTVDLPRKPEWFGW 450 D+NDL+ KGT+KLEKVKT++LPRK EW GW Sbjct: 409 DLNDLIKKGTVKLEKVKTIELPRKAEWAGW 438 >ref|NP_772606.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51231.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 427 Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/450 (82%), Positives = 401/450 (89%), Gaps = 23/450 (5%) Query: 1 MTIRSLLSSVSVALLISSAAATAQAQIAIGHLQDLSGGTSDVGTPYGQGVADTFAWVNKN 60 M +SLLS+ S+AL+I++ +A+AQAQIAIGHL D SGGTSDVGTPYGQ VADTFAWVNKN Sbjct: 1 MKTKSLLSTASLALVIAAFSASAQAQIAIGHLADYSGGTSDVGTPYGQAVADTFAWVNKN 60 Query: 61 GGIGGKQLNVDSNDYGYQVPRAIKKKGITVDCLPLADVPVAGADAVIGNRAYGTEPGKVA 120 GG+GGKQLNVD+NDYGYQVPRAI + + KVA Sbjct: 61 GGVGGKQLNVDTNDYGYQVPRAIALY-----------------------KKWSAPDSKVA 97 Query: 121 AIMGWGTADTEALTGFLAQDKIPDISGSYAAALTDPQGTSGKAKPAPYNFFYGPSYSDSM 180 AIMGWGTADTEALTGFLAQDKIPD+SGSYAAALTDP+G SGKAKPAPYNFFYGPSYSDS+ Sbjct: 98 AIMGWGTADTEALTGFLAQDKIPDLSGSYAAALTDPEGVSGKAKPAPYNFFYGPSYSDSL 157 Query: 181 RAMLTWAAEDWKAKGKPGKPKFVHMGANHPYPNAPKAAGEALATELGFEVLPPLVFALSP 240 RAML WAAEDWKAKGKPGKPKFVHMGANHPYPNAPKAAGEA+A ELGFE LPPLVFAL+P Sbjct: 158 RAMLMWAAEDWKAKGKPGKPKFVHMGANHPYPNAPKAAGEAMAQELGFEALPPLVFALTP 217 Query: 241 GDYSAQCLSLKSSGANYAYLGNTAASNISVLKACKTAGVDVQFLGNVWGMDENAAKTAGD 300 GDYSAQCLSLKSSGANYAYLGNTAASNISVLKACKTAGV++QFLGNVWGMDENAAKTAGD Sbjct: 218 GDYSAQCLSLKSSGANYAYLGNTAASNISVLKACKTAGVEIQFLGNVWGMDENAAKTAGD 277 Query: 301 AADGVIFPLRTAVSWGGNAPGMKTVMEISKMSDPSGKVYRPVHYIAAVCSALYLKEALDW 360 AA+GVIFPLRTAVSWGG+APGMKTVMEISK+SDP+GKVYRPVHY+AAVCSALY++EALDW Sbjct: 278 AANGVIFPLRTAVSWGGDAPGMKTVMEISKISDPTGKVYRPVHYVAAVCSALYMREALDW 337 Query: 361 AAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWTEKDHRPTTKVDLYRSKISGATDG 420 AAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWT+KDHR T KVDLYR+KI+GATDG Sbjct: 338 AAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWTDKDHRGTLKVDLYRTKIAGATDG 397 Query: 421 DINDLMGKGTIKLEKVKTVDLPRKPEWFGW 450 D+NDLM KGTIKLEKVKTV+LPRK E GW Sbjct: 398 DLNDLMAKGTIKLEKVKTVELPRKAELLGW 427 >ref|NP_949381.1| branched chain amino-acid ABC transporter substrate-binding protein [Rhodopseudomonas palustris CGA009] ref|YP_001993544.1| ABC transporter substrate-binding protein [Rhodopseudomonas palustris TIE-1] emb|CAE29486.1| possible branched-chain amino acid ABC transport system substrate-binding protein [Rhodopseudomonas palustris CGA009] gb|ACF03069.1| ABC transporter substrate-binding protein [Rhodopseudomonas palustris TIE-1] Length = 426 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/452 (80%), Positives = 395/452 (87%), Gaps = 28/452 (6%) Query: 1 MTIRSLLSSVSVALLISSAAATAQAQIAIGHLQDLSGGTSDVGTPYGQGVADTFAWVNKN 60 MT++SLLSS ++AL+I+ +ATAQAQIAIGHL D SGGTSDVGTPYGQ VADTFAWVNKN Sbjct: 1 MTMKSLLSSAALALVIAGTSATAQAQIAIGHLADYSGGTSDVGTPYGQAVADTFAWVNKN 60 Query: 61 GGIGGKQLNVDSNDYGYQVPRAIK--KKGITVDCLPLADVPVAGADAVIGNRAYGTEPGK 118 GG+ GKQLNVD+NDYGYQVPRAI KK +G D K Sbjct: 61 GGVAGKQLNVDTNDYGYQVPRAIALYKK-------------WSGGD-------------K 94 Query: 119 VAAIMGWGTADTEALTGFLAQDKIPDISGSYAAALTDPQGTSGKAKPAPYNFFYGPSYSD 178 VAAIMGWGTADTEALTGFLA DKIPD+SGSYAAALTDP+GTSGKAKPAPYNFFYGPSYSD Sbjct: 95 VAAIMGWGTADTEALTGFLANDKIPDLSGSYAAALTDPEGTSGKAKPAPYNFFYGPSYSD 154 Query: 179 SMRAMLTWAAEDWKAKGKPGKPKFVHMGANHPYPNAPKAAGEALATELGFEVLPPLVFAL 238 ++RA L WAAEDWKAKGK G PKFVHMGANHPYPNAPKAAGEA+A ELGFEVLPPLVFAL Sbjct: 155 ALRAELMWAAEDWKAKGKSGAPKFVHMGANHPYPNAPKAAGEAIAKELGFEVLPPLVFAL 214 Query: 239 SPGDYSAQCLSLKSSGANYAYLGNTAASNISVLKACKTAGVDVQFLGNVWGMDENAAKTA 298 +PGDYSAQCLSLKSSGANYAYLGNTAASNISV+KACK AGVDVQF+ NVWGMDENAAKTA Sbjct: 215 APGDYSAQCLSLKSSGANYAYLGNTAASNISVMKACKAAGVDVQFMSNVWGMDENAAKTA 274 Query: 299 GDAADGVIFPLRTAVSWGGNAPGMKTVMEISKMSDPSGKVYRPVHYIAAVCSALYLKEAL 358 GDAADGVIFPLRTAV+WGG APGMKTV EISK+SDPSG VYRPVHY+AAVCSALY+KEA+ Sbjct: 275 GDAADGVIFPLRTAVAWGGKAPGMKTVEEISKISDPSGNVYRPVHYVAAVCSALYMKEAI 334 Query: 359 DWAAKNGGATGENVAKGFYQKKDWVPAGMDGVCNPSTWTEKDHRPTTKVDLYRSKISGAT 418 +WAAKNGGATGENVAKGFYQK DWVPAGM+GVCNPSTWT KDHR T K+DLYR+K+SG T Sbjct: 335 EWAAKNGGATGENVAKGFYQKADWVPAGMEGVCNPSTWTAKDHRGTMKIDLYRAKVSGPT 394 Query: 419 DGDINDLMGKGTIKLEKVKTVDLPRKPEWFGW 450 DGD+ DL+ KGTIKLEKVKTVDLPRKPEW GW Sbjct: 395 DGDLKDLIAKGTIKLEKVKTVDLPRKPEWAGW 426