BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0025.p (338 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207064.1| nucleotide sugar epimerase capsular polysacc... 553 e-155 ref|YP_485175.1| NAD-dependent epimerase/dehydratase [Rhodopseud... 551 e-155 ref|ZP_08630726.1| NAD-dependent epimerase/dehydratase [Bradyrhi... 543 e-152 ref|YP_001241485.1| nucleotide sugar epimerase [Bradyrhizobium s... 541 e-152 ref|ZP_07025031.1| NAD-dependent epimerase/dehydratase [Afipia s... 532 e-149 >ref|YP_001207064.1| nucleotide sugar epimerase capsular polysaccharide biosynthesis protein [Bradyrhizobium sp. ORS 278] emb|CAL78847.1| nucleotide sugar epimerase; putative Capsular polysaccharide biosynthesis protein [Bradyrhizobium sp. ORS 278] Length = 338 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 261/338 (77%), Positives = 297/338 (87%) Query: 1 MSNDTPLVTGAAGFIGFHVTQRLLAAGRKVVGLDIVNDYYDPRLKEARLEILKRDPNFTF 60 M+N+ LVTGAAGFIGFH+TQ+LLA GR+VVGLD +N YYDP LKEARL +L+ P F+F Sbjct: 1 MANEPILVTGAAGFIGFHLTQQLLAEGRQVVGLDNINSYYDPTLKEARLALLQAQPGFSF 60 Query: 61 VKLDLTDRAGIKSLFAQYRFPVVVHLAAQAGVRYSLEHPHAYVDANLEGFINILEGCRHN 120 KLDL DRA IK+LFA +RFP VVHLAAQAGVRYSLE+PHAYVDANLEGFIN+LEGCRH+ Sbjct: 61 HKLDLVDRAAIKALFAAHRFPAVVHLAAQAGVRYSLENPHAYVDANLEGFINVLEGCRHH 120 Query: 121 RCGHLLFASSSSVYGSNTKLPFSVHDNVDHPISLYAASKKANELMAHSYSHLYGIPATGL 180 CGHLLFASSSSVYG+NTKLPFSV DNVDHPISLYAASKKANELMAHSYSHLY +PATGL Sbjct: 121 GCGHLLFASSSSVYGANTKLPFSVKDNVDHPISLYAASKKANELMAHSYSHLYRLPATGL 180 Query: 181 RFFTVYGPWGRPDMAMFIFAKAILSGTPIKLFNNGDMRRDFTFVDDIAEAIIRLMGRPPQ 240 RFFTVYGPWGRPDMAMFIFAKAIL+G P++LFN+G MRRDFT+VDDI +AI+RL+GRPPQ Sbjct: 181 RFFTVYGPWGRPDMAMFIFAKAILAGQPVRLFNHGQMRRDFTYVDDIVQAIVRLIGRPPQ 240 Query: 241 PKSIPATAAPDPSSSRAPWKIYNIGNNNPEELLRVVSLLEKGLGRTAIKELLPMQPGDVP 300 PDPSSSRAPW+IYNIGNN+PE+L V++LLEK GR AIKE+LPMQPGDV Sbjct: 241 GNPDWNGNTPDPSSSRAPWRIYNIGNNHPEQLTDVITLLEKEFGRPAIKEMLPMQPGDVE 300 Query: 301 ATYADIEDLAQDIGFRPSTSIEDGIARFIKWYRKYHKV 338 ATYAD+ DL +DIGFRP+TSI DGIARF +WYR YH++ Sbjct: 301 ATYADVSDLERDIGFRPATSIVDGIARFARWYRDYHRI 338 >ref|YP_485175.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris HaA2] gb|ABD06264.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris HaA2] Length = 338 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 258/332 (77%), Positives = 294/332 (88%) Query: 7 LVTGAAGFIGFHVTQRLLAAGRKVVGLDIVNDYYDPRLKEARLEILKRDPNFTFVKLDLT 66 LVTGAAGFIGFHVTQ+LLA G KVVGLD++NDYYDP LK ARL+IL+R+P+FTFVKLDL Sbjct: 7 LVTGAAGFIGFHVTQQLLAKGSKVVGLDVLNDYYDPALKRARLDILQRNPDFTFVKLDLA 66 Query: 67 DRAGIKSLFAQYRFPVVVHLAAQAGVRYSLEHPHAYVDANLEGFINILEGCRHNRCGHLL 126 DR IK+LFA+YRF VV+HLAAQAGVRYS+E+P+AY+D+NLEGFIN+LEGCRHN C HLL Sbjct: 67 DRGAIKALFAEYRFAVVIHLAAQAGVRYSIENPYAYIDSNLEGFINVLEGCRHNGCRHLL 126 Query: 127 FASSSSVYGSNTKLPFSVHDNVDHPISLYAASKKANELMAHSYSHLYGIPATGLRFFTVY 186 +ASSSSVYG+NTKLPF+V DNVDHPISLYAA+KKANELMAH+YSHLY IP TGLRFFTVY Sbjct: 127 YASSSSVYGANTKLPFAVQDNVDHPISLYAATKKANELMAHAYSHLYRIPTTGLRFFTVY 186 Query: 187 GPWGRPDMAMFIFAKAILSGTPIKLFNNGDMRRDFTFVDDIAEAIIRLMGRPPQPKSIPA 246 GPWGRPDMAMFIFAKAI G PIKLFN G MRRDFT+VDD++EAI+RL+ +PPQ + + Sbjct: 187 GPWGRPDMAMFIFAKAITEGAPIKLFNRGMMRRDFTYVDDVSEAIVRLVDKPPQGNAAWS 246 Query: 247 TAAPDPSSSRAPWKIYNIGNNNPEELLRVVSLLEKGLGRTAIKELLPMQPGDVPATYADI 306 PDP+SS APWKIYNIGNNNPEELL VVSLLEK GR A KE+LPMQPGDVPATYAD+ Sbjct: 247 GDHPDPASSTAPWKIYNIGNNNPEELLHVVSLLEKEFGRPAQKEMLPMQPGDVPATYADV 306 Query: 307 EDLAQDIGFRPSTSIEDGIARFIKWYRKYHKV 338 EDL +DIGFRPST+IE G+A F WYR YHK+ Sbjct: 307 EDLMRDIGFRPSTTIERGVAAFAAWYRAYHKL 338 >ref|ZP_08630726.1| NAD-dependent epimerase/dehydratase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06580.1| NAD-dependent epimerase/dehydratase [Bradyrhizobiaceae bacterium SG-6C] Length = 343 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 244/338 (72%), Positives = 300/338 (88%) Query: 1 MSNDTPLVTGAAGFIGFHVTQRLLAAGRKVVGLDIVNDYYDPRLKEARLEILKRDPNFTF 60 MS+ T LVTGAAGFIGFH +Q+LL AG +VVG+D +NDYYDP+LKEARL++L++DP+F+F Sbjct: 5 MSDRTILVTGAAGFIGFHQSQKLLQAGYRVVGVDNINDYYDPKLKEARLDVLRKDPSFSF 64 Query: 61 VKLDLTDRAGIKSLFAQYRFPVVVHLAAQAGVRYSLEHPHAYVDANLEGFINILEGCRHN 120 +KLDL DRA LF +RFPVV+HLAAQAGVRYSLE+PHAYVDANL+GFINILEGCRHN Sbjct: 65 IKLDLADRAVTADLFKAHRFPVVIHLAAQAGVRYSLENPHAYVDANLQGFINILEGCRHN 124 Query: 121 RCGHLLFASSSSVYGSNTKLPFSVHDNVDHPISLYAASKKANELMAHSYSHLYGIPATGL 180 C HLL+ASSSSVYG+NTKLPFSVHD+VDHP+SLYAASKKANELMAHSYSHL+GIP TGL Sbjct: 125 DCKHLLYASSSSVYGANTKLPFSVHDSVDHPVSLYAASKKANELMAHSYSHLFGIPTTGL 184 Query: 181 RFFTVYGPWGRPDMAMFIFAKAILSGTPIKLFNNGDMRRDFTFVDDIAEAIIRLMGRPPQ 240 RFFTVYGPWGRPDMAM++FA AIL+G PIK+FN G+MRRDFT+VDD+ EAI+RL+ RPP Sbjct: 185 RFFTVYGPWGRPDMAMYLFADAILAGKPIKMFNYGNMRRDFTYVDDVTEAIVRLIDRPPI 244 Query: 241 PKSIPATAAPDPSSSRAPWKIYNIGNNNPEELLRVVSLLEKGLGRTAIKELLPMQPGDVP 300 +++ A PDP +S APW+++N+GNN+PEEL +VV +LEK GR A KEL+P+QPGDVP Sbjct: 245 AQTLAPNAVPDPGTSAAPWRVFNVGNNHPEELTKVVEVLEKEFGRKAEKELMPIQPGDVP 304 Query: 301 ATYADIEDLAQDIGFRPSTSIEDGIARFIKWYRKYHKV 338 AT+AD++DL +++GFRPST+IEDG+ARF WYR+YH++ Sbjct: 305 ATFADVDDLMREVGFRPSTTIEDGVARFAAWYREYHQL 342 >ref|YP_001241485.1| nucleotide sugar epimerase [Bradyrhizobium sp. BTAi1] gb|ABQ37579.1| nucleotide sugar epimerase [Bradyrhizobium sp. BTAi1] Length = 338 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 254/338 (75%), Positives = 294/338 (86%) Query: 1 MSNDTPLVTGAAGFIGFHVTQRLLAAGRKVVGLDIVNDYYDPRLKEARLEILKRDPNFTF 60 M++D LVTGAAGFIGFH+ QRLLA GR+V+G+D +N YYDP+LK+ARL+ L P F F Sbjct: 1 MADDPILVTGAAGFIGFHLAQRLLAEGRQVIGIDNINAYYDPKLKQARLDRLAAQPGFIF 60 Query: 61 VKLDLTDRAGIKSLFAQYRFPVVVHLAAQAGVRYSLEHPHAYVDANLEGFINILEGCRHN 120 KLDL DRAG+K+LFA + FP VVHLAAQAGVRYSL++PHAYVDANLEGFINILEGCRH+ Sbjct: 61 HKLDLVDRAGVKALFAAHHFPAVVHLAAQAGVRYSLDNPHAYVDANLEGFINILEGCRHH 120 Query: 121 RCGHLLFASSSSVYGSNTKLPFSVHDNVDHPISLYAASKKANELMAHSYSHLYGIPATGL 180 C HLLFASSSSVYG+NTKLPFSV DNVDHPISLYAASKKANELMAHSYSHLY +PATGL Sbjct: 121 GCAHLLFASSSSVYGANTKLPFSVKDNVDHPISLYAASKKANELMAHSYSHLYRLPATGL 180 Query: 181 RFFTVYGPWGRPDMAMFIFAKAILSGTPIKLFNNGDMRRDFTFVDDIAEAIIRLMGRPPQ 240 RFFTVYGPWGRPDMAMFIFAKAIL+G P++LFN+G MRRDFT++DDI +AI RL+GRPPQ Sbjct: 181 RFFTVYGPWGRPDMAMFIFAKAILAGQPVRLFNHGQMRRDFTYIDDIVQAIHRLIGRPPQ 240 Query: 241 PKSIPATAAPDPSSSRAPWKIYNIGNNNPEELLRVVSLLEKGLGRTAIKELLPMQPGDVP 300 PDPSSSRAPW+IYNIGNN+PE+L+ V++LLEK GR AIKE+LPMQPGDV Sbjct: 241 GNPDWDGTRPDPSSSRAPWRIYNIGNNHPEQLMDVITLLEKEFGRPAIKEMLPMQPGDVE 300 Query: 301 ATYADIEDLAQDIGFRPSTSIEDGIARFIKWYRKYHKV 338 ATYAD+ DL +DIGFRP+T I DGIARF +WYR+YH++ Sbjct: 301 ATYADVSDLERDIGFRPATPIADGIARFARWYREYHQI 338 >ref|ZP_07025031.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2] gb|EFI52173.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2] Length = 338 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 244/338 (72%), Positives = 285/338 (84%) Query: 1 MSNDTPLVTGAAGFIGFHVTQRLLAAGRKVVGLDIVNDYYDPRLKEARLEILKRDPNFTF 60 MS + LVTGAAGFIGFHV+QRLL G +VVGLD +NDYYDP LKEARL IL+ D NF+F Sbjct: 1 MSKQSILVTGAAGFIGFHVSQRLLQGGHRVVGLDSINDYYDPSLKEARLAILRNDSNFSF 60 Query: 61 VKLDLTDRAGIKSLFAQYRFPVVVHLAAQAGVRYSLEHPHAYVDANLEGFINILEGCRHN 120 K+DL DRA +S+F ++RFPVV+HLAAQAGVRYS++HP Y+DANL+GF N+LEGCRHN Sbjct: 61 EKIDLADRAATRSIFERHRFPVVIHLAAQAGVRYSIDHPTVYIDANLQGFANVLEGCRHN 120 Query: 121 RCGHLLFASSSSVYGSNTKLPFSVHDNVDHPISLYAASKKANELMAHSYSHLYGIPATGL 180 C HLLFASSSSVYG+NTKLPFSVHDNVDHPISLYAASKKANELMAHSYSHLYG+P TGL Sbjct: 121 GCEHLLFASSSSVYGANTKLPFSVHDNVDHPISLYAASKKANELMAHSYSHLYGLPTTGL 180 Query: 181 RFFTVYGPWGRPDMAMFIFAKAILSGTPIKLFNNGDMRRDFTFVDDIAEAIIRLMGRPPQ 240 RFFTVYGPWGRPDMAMF+FAKAI G PI+LFNNGDM RDFT++DD+ EA++RL RP Sbjct: 181 RFFTVYGPWGRPDMAMFLFAKAITEGKPIRLFNNGDMMRDFTYIDDVTEAVVRLAQRPAT 240 Query: 241 PKSIPATAAPDPSSSRAPWKIYNIGNNNPEELLRVVSLLEKGLGRTAIKELLPMQPGDVP 300 P + PDP+SSRAPW+IYNIGNN PE+L+ +V LEK GRTA KELLPMQ GDV Sbjct: 241 PNASWDAQHPDPASSRAPWRIYNIGNNQPEKLMDLVQALEKEFGRTARKELLPMQAGDVY 300 Query: 301 ATYADIEDLAQDIGFRPSTSIEDGIARFIKWYRKYHKV 338 ATYADI+DL +++ F PST + DG+ARF+ WYR+YH+V Sbjct: 301 ATYADIDDLQREVDFHPSTPLADGVARFVAWYREYHRV 338