BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0018.p (525 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07657351.1| putative glycosyltransferase, group 1 family ... 206 7e-51 gb|EGP43833.1| glycosyl transferase group 1 protein 2 [Achromoba... 160 6e-37 ref|NP_885150.1| capsular polysaccharide biosynthesis protein [B... 159 1e-36 ref|NP_889464.1| capsular polysaccharide biosynthesis protein [B... 157 4e-36 ref|NP_880354.1| capsular polysaccharide biosynthesis protein [B... 157 5e-36 >ref|ZP_07657351.1| putative glycosyltransferase, group 1 family protein [Roseibium sp. TrichSKD4] gb|EFO33998.1| putative glycosyltransferase, group 1 family protein [Roseibium sp. TrichSKD4] Length = 592 Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 137/412 (33%), Positives = 203/412 (49%), Gaps = 13/412 (3%) Query: 69 AQAMSSASAKASPHRSGILMIIGSLGPGGAERQMVALVEQIVSRGIDSVTVALVHPPATE 128 A +SS + GI GSLG GGAERQMV + ++ RGI + V P Sbjct: 175 ADFVSSLPRQGMTQTKGIAFYTGSLGSGGAERQMVNTILALLDRGIGPIRVVCAGDP--- 231 Query: 129 RENFFRARLQKAGVKIIDGFSAAKSPTGSGKTADPDPFEVLSPEL-----ADVRAYYDVL 183 F++ L G+ + D A + TA L+ +L +V A L Sbjct: 232 -NGFYKPVLDSVGIAV-DAVYADDTSANEQFTALSSAQLKLASDLPQELAMEVVALSSWL 289 Query: 184 SDVNPETVYLWMDEVCIKGGIAATVLQIPRTLLCFRNMPSYNFPYYHGYHRDCYRFLAEQ 243 P ++ W D I GG+A + QI +L R++ YNF ++ R Y+ A + Sbjct: 290 KHHQPSILHCWQDHCNIVGGLAGLLSQIRTIVLSTRSVAPYNFGFFQLNQRPTYQAFASR 349 Query: 244 PNLQMLNNSHAGARAYAAWLELPEGAIKVVHNGIDLDNDAAPKVLR-KQYRAALGIDEKM 302 P + +LNNS GA YA WL + I V+ NG+DL P +R++LGI + Sbjct: 350 PEITILNNSRRGADDYANWLGINRAKIDVIRNGVDLSKLVRPAPGEIASFRSSLGIPDSA 409 Query: 303 LIVGGVFRMMTEKRPFLWLDVAAMIREKMPNVRFLLVGNGARFDDVRARAEQLGLTGALI 362 L+VG +F + KRP LW+DVAA I + P+V FL++G+GA + R + GLT Sbjct: 410 LVVGAIFTIYKFKRPLLWVDVAAKIAKARPDVHFLMIGDGAMRAETEERIARYGLTKRFH 469 Query: 363 FADLELRPAAAIAAMDLFFLASRIEGLPNVILEAQALGVPVATTSAGGAPEAVLDGKTGQ 422 A A++ M+ F L S EGLPNV+LEAQ + VP T + GGA EA+ D KTG Sbjct: 470 LPGRMANVALALSVMNAFLLTSSHEGLPNVLLEAQTMAVPAVTVNVGGAAEAIDDDKTGL 529 Query: 423 IFKPDATARVMADTIVDLLGNLRWREKAAQLAPRQVKTSFNIELMADGMLAA 474 + A+ +A ++ +L R + + A++ P V+ F ++ M + L A Sbjct: 530 VVD-KASPDQLALAVLKMLDADR-KAEIARIGPEFVRHRFGLDRMIEETLVA 579 >gb|EGP43833.1| glycosyl transferase group 1 protein 2 [Achromobacter xylosoxidans AXX-A] Length = 687 Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 129/426 (30%), Positives = 201/426 (47%), Gaps = 47/426 (11%) Query: 85 GILMIIGSLGPGGAERQMVALVEQIVS----------------RGIDSVTVALVHPPATE 128 + ++ GSLGPGGAERQ+ L ++ ++ + PP + Sbjct: 247 SVALVTGSLGPGGAERQLTRLAGELARMSDTPSPRPADAPMKPEKVEVLVKQHTEPPGST 306 Query: 129 RE---NFFRARLQKAGVKIID-----GFSAAKS--PTGS-GKTAD--PDPFEVLSPELAD 175 ++ +FF + L KA + + + S A P GS G+ + P P LA Sbjct: 307 KKQGLDFFLSVLVKARIPVTEINKLPAISVAHQSVPDGSLGRLLEQLPPPVHYGVTRLAP 366 Query: 176 V--RAYYDVLSDVNPETVYLWMDEVCIKGGIAATVLQIPRTLLCFRNMP-SYNFPYYHGY 232 V + +DV+S LW D C+ G +AA + P L FR +P + + Sbjct: 367 VLRASTFDVVS--------LWQDGTCLFGALAALLAGAPTIHLVFRGLPPNIRKDRFREE 418 Query: 233 HRDCYRFLAEQPNLQMLNNSHAGARAYAAWLELPEGAIKVVHNGI-DLDNDAAPKVLRKQ 291 + + Y+ LA+ P + ++NS A AYA WL +P V++NG+ DL DA K Sbjct: 419 YPELYQALAQVPGVHFVSNSRKAAEAYAEWLGIPIVRFHVLYNGVPDLATDAGAADKEKW 478 Query: 292 YRAALGIDEKMLIVGGVFRMMTEKRPFLWLDVAAMIREKMPNVRFLLVGNGARFDDVRAR 351 + +GGVFR+ +KRP LW+ +AAM ++ P RF++VG+G D++ A Sbjct: 479 QAFQESTADATETIGGVFRLEPDKRPQLWIKLAAMYLKQRPQARFVIVGDGRLHDNIVAL 538 Query: 352 AEQLGLTGALIFADLELRPAAAIAAMDLFFLASRIEGLPNVILEAQALGVPVATTSAGGA 411 A+ L +T L+ L + MD L SR EGLPNV++EAQ LGVPV +T AGGA Sbjct: 539 AQDLCVTDRLLLVGLSNHVGYWYSQMDAKVLLSRYEGLPNVLIEAQLLGVPVVSTPAGGA 598 Query: 412 PEAVLDGKTGQIF----KPDATARVMADTIVDLLGNLRWREKAAQLAPRQVKTSFNIELM 467 E + +TG + PD D + ++ +R E + + +T F++E M Sbjct: 599 GECFEEDQTGHLLGDVEHPDLHE--ACDKVASIVDRVRADESLKAQSRERAQTLFSLEAM 656 Query: 468 ADGMLA 473 L+ Sbjct: 657 LGKFLS 662 >ref|NP_885150.1| capsular polysaccharide biosynthesis protein [Bordetella parapertussis 12822] emb|CAE38252.1| capsular polysaccharide biosynthesis protein [Bordetella parapertussis] Length = 694 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 120/363 (33%), Positives = 178/363 (49%), Gaps = 25/363 (6%) Query: 86 ILMIIGSLGPGGAERQMV---ALVEQIVSRG--------IDSVTVALVHPPATERENFFR 134 +LMI GSLG GGAERQ V ++ + +G + V V + E +FF Sbjct: 284 VLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFA 343 Query: 135 ARLQKAGVKIIDGFSAAKSPTGSGKTADPDPFE----VLSPELAD-VRAYYDVLSDVNPE 189 A L+ AG+ + +S ++ G ++ P+ L ++ + DV+ P Sbjct: 344 ATLRDAGIPV-SVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPS 402 Query: 190 TVYLWMDEVCIKGGIAATVLQIPRTLLCFRNMPSYNFPYYHGYHRDC-YRFLAEQPNLQM 248 V++W D +AA + +PR +L R MP + P + D Y L + + + Sbjct: 403 VVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVAL 462 Query: 249 LNNSHAGARAYAAWLELPEGAIKVVHNGI----DLDNDAAPKVLRKQYRAALGIDEKMLI 304 +NS A YA WL + E I VV+NG+ + +DA ++ Q+ A + Sbjct: 463 SSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMM-AQFDAR--TSDARFT 519 Query: 305 VGGVFRMMTEKRPFLWLDVAAMIREKMPNVRFLLVGNGARFDDVRARAEQLGLTGALIFA 364 VG V R+ KRPFLW++ A PNVRF++VG G + VR A++LG+ ++F Sbjct: 520 VGTVMRVDDNKRPFLWVEAAQRFAASHPNVRFIMVGGGPLLESVREFAQRLGMGERILFT 579 Query: 365 DLELRPAAAIAAMDLFFLASRIEGLPNVILEAQALGVPVATTSAGGAPEAVLDGKTGQIF 424 L R + + F L SR EGLPNV++EAQ GVPV TT AGGA EAV +G TG Sbjct: 580 GLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL 639 Query: 425 KPD 427 D Sbjct: 640 PAD 642 >ref|NP_889464.1| capsular polysaccharide biosynthesis protein [Bordetella bronchiseptica RB50] emb|CAE33420.1| capsular polysaccharide biosynthesis protein [Bordetella bronchiseptica RB50] Length = 694 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 119/363 (32%), Positives = 177/363 (48%), Gaps = 25/363 (6%) Query: 86 ILMIIGSLGPGGAERQMV---ALVEQIVSRG--------IDSVTVALVHPPATERENFFR 134 +LMI GSLG GGAERQ V ++ + +G + V V + E +FF Sbjct: 284 VLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFA 343 Query: 135 ARLQKAGVKIIDGFSAAKSPTGSGKTADPDPFE----VLSPELAD-VRAYYDVLSDVNPE 189 A L AG+ + +S ++ G ++ P+ L ++ + DV+ P Sbjct: 344 ATLHDAGIPV-SVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPS 402 Query: 190 TVYLWMDEVCIKGGIAATVLQIPRTLLCFRNMPSYNFPYYHGYHRDC-YRFLAEQPNLQM 248 V++W D +AA + +PR +L R MP + P + D Y L + + + Sbjct: 403 VVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVAL 462 Query: 249 LNNSHAGARAYAAWLELPEGAIKVVHNGI----DLDNDAAPKVLRKQYRAALGIDEKMLI 304 +NS A YA WL + E I VV+NG+ + +DA ++ Q+ A + Sbjct: 463 SSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMM-AQFDAR--TSDARFT 519 Query: 305 VGGVFRMMTEKRPFLWLDVAAMIREKMPNVRFLLVGNGARFDDVRARAEQLGLTGALIFA 364 VG V R+ KRPFLW++ A P+VRF++VG G + VR A++LG+ ++F Sbjct: 520 VGTVMRVDDNKRPFLWVEAAQRFAASHPHVRFIMVGGGPLLESVREFAQRLGMGERILFT 579 Query: 365 DLELRPAAAIAAMDLFFLASRIEGLPNVILEAQALGVPVATTSAGGAPEAVLDGKTGQIF 424 L R + + F L SR EGLPNV++EAQ GVPV TT AGGA EAV +G TG Sbjct: 580 GLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL 639 Query: 425 KPD 427 D Sbjct: 640 PAD 642 >ref|NP_880354.1| capsular polysaccharide biosynthesis protein [Bordetella pertussis Tohama I] emb|CAE41913.1| capsular polysaccharide biosynthesis protein [Bordetella pertussis Tohama I] gb|AEE66972.1| capsular polysaccharide biosynthesis protein [Bordetella pertussis CS] Length = 694 Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 119/363 (32%), Positives = 178/363 (49%), Gaps = 25/363 (6%) Query: 86 ILMIIGSLGPGGAERQMV---ALVEQIVSRG--------IDSVTVALVHPPATERENFFR 134 +LMI GSLG GGAERQ V ++ + +G + V V + E +FF Sbjct: 284 VLMINGSLGAGGAERQFVNTAVAMQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFA 343 Query: 135 ARLQKAGVKIIDGFSAAKSPTGSGKTADPDPFE----VLSPELAD-VRAYYDVLSDVNPE 189 A L+ AG+ + +S ++ G ++ P+ L ++ + DV+ P Sbjct: 344 ATLRDAGIPV-SVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPS 402 Query: 190 TVYLWMDEVCIKGGIAATVLQIPRTLLCFRNMPSYNFPYYHGYHRDC-YRFLAEQPNLQM 248 V++W D +AA + +PR +L R MP + P + D Y L + + + Sbjct: 403 VVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVAL 462 Query: 249 LNNSHAGARAYAAWLELPEGAIKVVHNGI----DLDNDAAPKVLRKQYRAALGIDEKMLI 304 +NS A YA WL + E I VV+NG+ + +DA ++ Q+ A + Sbjct: 463 SSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMM-AQFDAR--TSDARFT 519 Query: 305 VGGVFRMMTEKRPFLWLDVAAMIREKMPNVRFLLVGNGARFDDVRARAEQLGLTGALIFA 364 VG V R+ KRPFLW++ A P+VRF++VG G + VR A++LG+ ++F Sbjct: 520 VGTVMRVDDNKRPFLWVEAAQRFAASHPHVRFIMVGGGPLLESVREFAQRLGMGERILFT 579 Query: 365 DLELRPAAAIAAMDLFFLASRIEGLPNVILEAQALGVPVATTSAGGAPEAVLDGKTGQIF 424 L R + + F L SR EGLPNV++EAQ GVPV TT AGGA EAV +G TG Sbjct: 580 GLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL 639 Query: 425 KPD 427 D Sbjct: 640 PAD 642