BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0014.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EFV82084.1| hypothetical protein HMPREF0005_00923 [Achromobac... 150 1e-34 ref|YP_001993558.1| ABC transporter [Rhodopseudomonas palustris ... 120 1e-25 emb|CBE67349.1| ABC transporter permease protein [NC10 bacterium... 100 2e-19 ref|YP_969326.1| ABC-2 type transporter [Acidovorax citrulli AAC... 95 8e-18 ref|YP_001907277.1| O-antigen ABC transporter permease [Erwinia ... 91 2e-16 >gb|EFV82084.1| hypothetical protein HMPREF0005_00923 [Achromobacter xylosoxidans C54] Length = 279 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/221 (40%), Positives = 133/221 (60%), Gaps = 2/221 (0%) Query: 1 MLMYSLLFAYVFPTRVGSSGGHP-DFAVNVLIGIVSWLAFQDLLARSTTILTAHASLVKQ 59 M +Y LF V RV S P D++ +L G+V WLA Q +A+S + + ++A+LVKQ Sbjct: 59 MGVYMFLFGVVMKARVNQSHEMPLDYSAYILSGMVPWLAIQLAMAKSASAIISNANLVKQ 118 Query: 60 IIFPVVVLPIKTAIASALPYSIALLFTIGYA-AVSGTLTFMVLTVPFLIAIQLIAMTGVA 118 IFP+ VLP + IA+ +P +I+L I Y A G+L + L + L+ + L M G+A Sbjct: 119 TIFPIEVLPARAVIAAMVPQAISLGVLIIYVLATHGSLFWTYLLLLPLLFMHLALMLGIA 178 Query: 119 LMLSALGIFFRDLRDIVTIFCAVNLFAQPILFNPYVTPSWMNWVFHFNPFSYQVWCWQDA 178 +LSA+ + RD+++ V +F V +F P++F P PS V + NPFSY +WC+QD Sbjct: 179 FVLSAVSVIVRDMKEFVQVFSLVGIFLVPVVFLPDWVPSVFKPVIYANPFSYLIWCYQDV 238 Query: 179 LYFGAFQHPAAWIVFPLGAVSCLAIGYAVFSRLQHGFGDAL 219 LYFG HP AW V + A+ LA+G +F+R + FGDAL Sbjct: 239 LYFGRIAHPLAWAVTFVFAIVSLAMGSRLFARFKGFFGDAL 279 >ref|YP_001993558.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gb|ACF03083.1| ABC-2 type transporter [Rhodopseudomonas palustris TIE-1] Length = 280 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 127/227 (55%), Gaps = 13/227 (5%) Query: 1 MLMYSLLFAYVFPTRVGSSG--GHPDFAVNVLIGIVSWLAFQDLLARSTTILTAHASLVK 58 +L++ F V +VG + + DF + +L G++ WL QD+L R +T++ +A LVK Sbjct: 59 VLVFLFFFGEVLKVKVGGAHLPANNDFTIYLLSGLLPWLVLQDVLTRGSTLVVNNAHLVK 118 Query: 59 QIIFPVVVLPIKTAIASALPYSIALLFTIGYAAVSGTL-TFMVLTVPFLIAIQLIAM--- 114 Q+ FP+ VLPIK A+P + +L + TL T L +L+ L+A Sbjct: 119 QVAFPLDVLPIK-----AIPPAFVILLVGLLLLIVYTLMTTFALPATYLVLPLLLAELIL 173 Query: 115 --TGVALMLSALGIFFRDLRDIVTIFCAVNLFAQPILFNPYVTPSWMNWVFHFNPFSYQV 172 G+AL LSALG+F RDL+DIV +F V ++ PI + P+ + + NPF+ + Sbjct: 174 LCVGIALFLSALGVFIRDLKDIVQVFSFVGVYVSPIFYTIDTVPAKLRALVFLNPFTPII 233 Query: 173 WCWQDALYFGAFQHPAAWIVFPLGAVSCLAIGYAVFSRLQHGFGDAL 219 +QD L++G+F HP AW+V + +V+ L IG VF+ QH FG L Sbjct: 234 LTFQDVLFYGSFAHPWAWVVSIVLSVAALLIGARVFNTTQHYFGSYL 280 >emb|CBE67349.1| ABC transporter permease protein [NC10 bacterium 'Dutch sediment'] Length = 263 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 3/221 (1%) Query: 1 MLMYSLLFAYVFPTRVGSSGGHPDFAVNVLIGIVSWLAFQDLLARSTTILTAHASLVKQI 60 +++Y+ +F+ + RVG G FAV + G++ W AF + L RST I+ H +L+K++ Sbjct: 44 LILYTFVFSTILKVRVGVQEGTGSFAVYLFCGLLPWNAFAEPLGRSTGIVFEHTNLIKRM 103 Query: 61 IFPVVVLPIKTAIASALPYSI--ALLFTIGYAAVSGTLTFMVLTVPFLIAIQLIAMTGVA 118 +FPV +LP+ I+S + I A+LF + A + ++ +P L+ +Q+ G+A Sbjct: 104 VFPVEILPLYIVISSIINQLIGLAILFLV-LLANGHRFSMLIAFLPALLLLQITFTVGLA 162 Query: 119 LMLSALGIFFRDLRDIVTIFCAVNLFAQPILFNPYVTPSWMNWVFHFNPFSYQVWCWQDA 178 +++ +F RD+ ++ + + LF PI + + P NP V ++ Sbjct: 163 WIIAGATVFLRDIAQVIGMITTLWLFLTPIFYTANLVPEGWRPFLGLNPMYAVVESYRSI 222 Query: 179 LYFGAFQHPAAWIVFPLGAVSCLAIGYAVFSRLQHGFGDAL 219 + G P++ I L AV +G+ +F+R+Q F D + Sbjct: 223 ILKGQLPDPSSLIYLFLTAVITFVVGHRIFTRMQPAFADVI 263 >ref|YP_969326.1| ABC-2 type transporter [Acidovorax citrulli AAC00-1] gb|ABM31552.1| ABC-2 type transporter [Acidovorax citrulli AAC00-1] Length = 260 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 2/215 (0%) Query: 3 MYSLLFAYVFPTRVGSSGGHPDFAVNVLIGIVSWLAFQDLLARSTTILTAHASLVKQIIF 62 +Y++++ +F R G ++ + V G+V +L F + L + A+ L+K +F Sbjct: 46 IYAVIYIMIFHVRAAGYGTE-EYVLLVFCGLVPFLGFSEALGNGVGSIIANKGLIKNTLF 104 Query: 63 PVVVLPIKTAIASALPYSIALLFTIGYAAVSGTLTFMVLTVPFLIAIQLIAMTGVALMLS 122 P+ ++P+K ++S++ + LL I +SG L VP ++ +QL+ G+ +L+ Sbjct: 105 PIELVPVKAVLSSSVTMGVGLLLLISALWISGVWHMTQLAVPLILLLQLMFSIGLIWLLA 164 Query: 123 ALGIFFRDLRDIVTIFCAVNLFAQPILFNPYVTPSWMNWVFHFNPFSYQVWCWQDALYFG 182 A+ +F +D+ IV IF + PI + + P + + NP Y + ++DALYFG Sbjct: 165 AVNVFIQDIGQIVAIFIMFLMLVSPIAYTHEMIPKELMPFMYPNPLYYLIMLYRDALYFG 224 Query: 183 AFQHPAAWIVFPLGAVSCLAIGYAVFSRLQHGFGD 217 + + ++F ++ IG VFSRL+ F D Sbjct: 225 SIRIDML-LIFSAISLVMFLIGGHVFSRLKPLFAD 258 >ref|YP_001907277.1| O-antigen ABC transporter permease [Erwinia tasmaniensis Et1/99] emb|CAO96384.1| O-antigen ABC transporter permease [Erwinia tasmaniensis Et1/99] Length = 255 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 15/223 (6%) Query: 6 LLFA--YVFPTRVGSSGGHPDFAVNVLIGIVSWLAFQDLLARSTTILTAHASLVKQIIFP 63 LLFA Y F ++ P++ V ++ G+ W F + ++A ++K+ +FP Sbjct: 39 LLFAMIYFFIFKLIMRVQIPNYTVFIITGLFPWQWFASSTGNALFSFLSNAQIIKKTVFP 98 Query: 64 VVVLPIKTAIASALPYSIALLFTIGYAAV-------SGTLTFMVLTVPFLIAIQLIAMTG 116 V+P+ + L + LFTI V S +L ++ VP + Q+I M G Sbjct: 99 RSVIPLSNVLMECLHF----LFTIPVILVFLYIYDMSPSLDWL-WGVPLIGMAQIILMLG 153 Query: 117 VALMLSALGIFFRDLRDIVTIFCAVNLFAQPILFNPYVTPSWMNWVFHFNPFSYQVWCWQ 176 VALMLS L +FFRDL +++ + + PIL++ + P +W+ +NPF+ + W+ Sbjct: 154 VALMLSTLNLFFRDLERFISLGIMLLFYCTPILYSAEMIPQEYSWLVEYNPFASMITSWR 213 Query: 177 DALYFGAFQHPAAWIVFPLGAVSCLAIGYAVFSRLQHGFGDAL 219 + +P ++ A+S L IG ++F++L+H F + L Sbjct: 214 ELFMHNTINYPLVAELYAYAAISLL-IGSSIFNKLKHRFAEIL 255