BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0011.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01045617.1| hypothetical protein NB311A_20646 [Nitrobacte... 219 2e-55 ref|ZP_08630753.1| transcriptional regulator, MarR family [Brady... 215 4e-54 ref|YP_419410.1| hypothetical protein amb0047 [Magnetospirillum ... 165 4e-39 ref|NP_819847.1| hypothetical protein CBU_0827 [Coxiella burneti... 160 2e-37 ref|ZP_01946550.2| conserved hypothetical protein [Coxiella burn... 158 6e-37 >ref|ZP_01045617.1| hypothetical protein NB311A_20646 [Nitrobacter sp. Nb-311A] gb|EAQ36385.1| hypothetical protein NB311A_20646 [Nitrobacter sp. Nb-311A] Length = 247 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 115/198 (58%), Positives = 144/198 (72%), Gaps = 2/198 (1%) Query: 15 IVLNLLNSV-DDGAQSQRRIAEELGIALGLVNAYLKRCIKKGLVKVSQAPARRYAYYLTP 73 I+L LL S+ +DG SQRR+A ELGIALGLVNAYLKRC+ KGLVKV PARRYAYYLTP Sbjct: 37 IILGLLTSLAEDGGLSQRRLAAELGIALGLVNAYLKRCVSKGLVKVQNVPARRYAYYLTP 96 Query: 74 KGFAEKSRLTVEYLSSSFSFFRQAKADCAQVLQLAKAQHFQNLVLCGRSDLAEIAMLSAV 133 KGFAEKSRLTV YLS SFSFFRQAK+DC + + AK++ + +VL GRSDLAEIA+L A+ Sbjct: 97 KGFAEKSRLTVTYLSQSFSFFRQAKSDCVAMFEAAKSRGLRTVVLMGRSDLAEIAVLCAI 156 Query: 134 DCGVSIVAIVDENAGDTRFVGVQVVAGYDRVAIPFDAVMITDVAYPSRAFDEAVRLYGPG 193 + GV IVA++D RF+G+ +VA V FDAV+ITD+ + + A G Sbjct: 157 ESGVEIVALIDAETKSGRFLGIPLVASIGAVERNFDAVVITDLVGAHESRNLAALAVGRD 216 Query: 194 RVLAPSLLGLNHQERQDA 211 RVL P LLG+ ++R+D+ Sbjct: 217 RVLLPRLLGI-VEDREDS 233 >ref|ZP_08630753.1| transcriptional regulator, MarR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06607.1| transcriptional regulator, MarR family [Bradyrhizobiaceae bacterium SG-6C] Length = 218 Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 120/218 (55%), Positives = 156/218 (71%), Gaps = 7/218 (3%) Query: 1 MDHTLPDSSGEDE--RIVLNLLNSVD-DGAQSQRRIAEELGIALGLVNAYLKRCIKKGLV 57 M+ + S E++ RI+L LLNSV+ DGA+SQR A ELGIALGLVNAYL RCIKKGLV Sbjct: 1 MERAISQSEREEDSDRIILELLNSVEQDGARSQRHFAAELGIALGLVNAYLNRCIKKGLV 60 Query: 58 KVSQAPARRYAYYLTPKGFAEKSRLTVEYLSSSFSFFRQAKADCAQVLQLAKAQHFQNLV 117 K SQAPARRYAYYLTP+GFAEKSRLTVEYLSSSF FFR+AKADC V ++AK ++ + L Sbjct: 61 KASQAPARRYAYYLTPQGFAEKSRLTVEYLSSSFGFFRKAKADCIHVFEIAKQRNLKRLA 120 Query: 118 LCGRSDLAEIAMLSAVDCGVSIVAIVDENAGDTRFVGVQVVAGYDRVAIPFDAVMITDVA 177 L G SDLAEIA + A++ +++VA+VD ++ RFVG+ VV + + P D V++T + Sbjct: 121 LLGISDLAEIAAICAIESDIALVAVVD-SSRLGRFVGLSVVEDFASLDEPIDGVIVTALM 179 Query: 178 Y-PSRA--FDEAVRLYGPGRVLAPSLLGLNHQERQDAA 212 PS +A + +GP VL P L+ L ++R+ AA Sbjct: 180 LSPSIGALVQQARQRFGPEAVLLPELVDLRPRKRKVAA 217 >ref|YP_419410.1| hypothetical protein amb0047 [Magnetospirillum magneticum AMB-1] dbj|BAE48851.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 205 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 127/202 (62%), Gaps = 9/202 (4%) Query: 11 EDERIVLNLLNSVD-DGAQSQRRIAEELGIALGLVNAYLKRCIKKGLVKVSQAPARRYAY 69 +++I+L+LL+ V D +QR IA +GIALGL N YLKRC+KKGL+KVSQAP RY Y Sbjct: 4 NEQQIILDLLSEVHRDSRATQREIATNMGIALGLANGYLKRCVKKGLIKVSQAPPNRYLY 63 Query: 70 YLTPKGFAEKSRLTVEYLSSSFSFFRQAKADCAQVLQLAKAQHFQNLVLCGRSDLAEIAM 129 YLTP GF+EK+RLT +YL+ SF FFR A++ C QVL A A+ ++ +VL G S+LAEI Sbjct: 64 YLTPAGFSEKARLTGDYLAQSFDFFRNARSQCRQVLDDAAARGWRRVVLVGASELAEIMA 123 Query: 130 LSAVDCGVSIVAIVDENA-GDTRFVGVQV---VAGYDRVAIPFDAVMITDVAYPSRAFDE 185 L A + +V +VD A GD G+ V +A RV D ++IT + +D Sbjct: 124 LCATGTDIELVGVVDPAAQGDAPLAGLPVLPSLAAASRV----DGIVITALQGAQAVYDS 179 Query: 186 AVRLYGPGRVLAPSLLGLNHQE 207 G R+ AP+LLGL+ E Sbjct: 180 YAAELGHQRLAAPALLGLSTPE 201 >ref|NP_819847.1| hypothetical protein CBU_0827 [Coxiella burnetii RSA 493] ref|YP_002303653.1| hypothetical protein CbuG_1174 [Coxiella burnetii CbuG_Q212] ref|YP_002305096.1| hypothetical protein CbuK_0695 [Coxiella burnetii CbuK_Q154] gb|AAO90361.1| hypothetical protein CBU_0827 [Coxiella burnetii RSA 493] gb|ACJ18508.1| hypothetical protein CbuG_1174 [Coxiella burnetii CbuG_Q212] gb|ACJ19951.1| hypothetical protein CbuK_0695 [Coxiella burnetii CbuK_Q154] Length = 198 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 129/198 (65%), Gaps = 6/198 (3%) Query: 7 DSSGEDERIVLNLLNSVDDGAQ-SQRRIAEELGIALGLVNAYLKRCIKKGLVKVSQAPAR 65 ++ +D I L +L S++ + +QR ++++LG+ALGL NAYLK CI KGLVK+ Q PA Sbjct: 2 NADDKDVEITLPILQSIEQQSNITQRTLSKKLGLALGLTNAYLKHCINKGLVKIEQIPAN 61 Query: 66 RYAYYLTPKGFAEKSRLTVEYLSSSFSFFRQAKADCAQVLQLAKAQHFQNLVLCGRSDLA 125 RY YYLTPKGFAEK+RLT +YLS SF F+R+A C Q+ + H + +VLCG SDLA Sbjct: 62 RYLYYLTPKGFAEKTRLTAQYLSRSFYFYRKAGQACLQLFNQCRLNHQKEVVLCGVSDLA 121 Query: 126 EIAMLSAVDCGVSIVAIVDEN-AGDTRFVGVQVVAGYDRVAIPFDAV-MITDVAYPSRAF 183 E+A+L A ++++ I D + GDT ++ +V ++ ++P +AV ++T P + Sbjct: 122 EVALLQAARAEMNVLGIYDPHYEGDT-YLNQEVWHSHE--SLPSEAVFVVTAFEAPQQMV 178 Query: 184 DEAVRLYGPGRVLAPSLL 201 + ++ P +VL PS+L Sbjct: 179 TDIQQVVAPHQVLVPSIL 196 >ref|ZP_01946550.2| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177'] ref|ZP_02219006.1| conserved hypothetical protein [Coxiella burnetii RSA 334] gb|EAX32840.2| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177'] gb|EDR35994.1| conserved hypothetical protein [Coxiella burnetii RSA 334] Length = 191 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 83/191 (43%), Positives = 125/191 (65%), Gaps = 6/191 (3%) Query: 14 RIVLNLLNSVDDGAQ-SQRRIAEELGIALGLVNAYLKRCIKKGLVKVSQAPARRYAYYLT 72 I L +L S++ + +QR ++++LG+ALGL NAYLK CI KGLVK+ Q PA RY YYLT Sbjct: 2 EITLPILQSIEQQSNITQRTLSKKLGLALGLTNAYLKHCINKGLVKIEQIPANRYLYYLT 61 Query: 73 PKGFAEKSRLTVEYLSSSFSFFRQAKADCAQVLQLAKAQHFQNLVLCGRSDLAEIAMLSA 132 PKGFAEK+RLT +YLS SF F+R+A C Q+ + H + +VLCG SDLAE+A+L A Sbjct: 62 PKGFAEKTRLTAQYLSRSFYFYRKAGQACLQLFNQCRLNHQKEVVLCGVSDLAEVALLQA 121 Query: 133 VDCGVSIVAIVDEN-AGDTRFVGVQVVAGYDRVAIPFDAV-MITDVAYPSRAFDEAVRLY 190 ++++ I D + GDT ++ +V ++ ++P +AV ++T P + + ++ Sbjct: 122 ARAEMNVLGIYDPHYEGDT-YLNQEVWHSHE--SLPSEAVFVVTAFEAPQQMVTDIQQVV 178 Query: 191 GPGRVLAPSLL 201 P +VL PS+L Sbjct: 179 APHQVLVPSIL 189