BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0003.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772649.1| hypothetical protein bll6009 [Bradyrhizobium ja... 543 e-152 ref|YP_766426.1| hypothetical protein RL0816 [Rhizobium legumino... 416 e-114 emb|CAE00212.1| hypothetical protein [Rhizobium leguminosarum bv... 414 e-114 ref|ZP_03507978.1| hypothetical protein RetlB5_23085 [Rhizobium ... 374 e-101 ref|ZP_08422271.1| hypothetical protein Desaf_1032 [Desulfovibri... 94 3e-17 >ref|NP_772649.1| hypothetical protein bll6009 [Bradyrhizobium japonicum USDA 110] dbj|BAC51274.1| bll6009 [Bradyrhizobium japonicum USDA 110] Length = 362 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 261/362 (72%), Positives = 299/362 (82%) Query: 1 MRLFQNSGLYPSYLPRLNQLAAKASSFDARRDVFLHDRFGAAHFLKPVLDGAADAFFTNG 60 MRLFQNS YPSYLPRLNQLAAKA SF+ RR VFL+DRFGA+HFL+PVLDG+ +AFFTNG Sbjct: 1 MRLFQNSCFYPSYLPRLNQLAAKAVSFEERRRVFLNDRFGASHFLQPVLDGSPEAFFTNG 60 Query: 61 DDEVLQRQWARERGMKEAPTLEAILLAQIEHHRTEVFYNLDPVRYPSAFVAKLPGCVKKT 120 DDEVLQR+WARE+GM PTLEAILLAQIEHH TEVFYNLDPVRYPSAFVAKLPGCVKK Sbjct: 61 DDEVLQRRWAREQGMGGEPTLEAILLAQIEHHATEVFYNLDPVRYPSAFVAKLPGCVKKA 120 Query: 121 LCWRAAPSGSADLTAYGAVLGNFPSILEAWRSKGCRAELFFPAIDPVMEQYGHSERPIDV 180 LCWR APSG+AD TAYGAVL NFP++L+ WR KGCRAELF+PA DPVM++YGH ERPIDV Sbjct: 121 LCWRGAPSGNADFTAYGAVLANFPTMLDMWRRKGCRAELFYPAHDPVMDEYGHGERPIDV 180 Query: 181 AFVGGYSRHHSARGRTLEQVAALAADRKIVFCLDVSRLTRLAESAVGRLLPLQKHRRPDA 240 FVGGYSRHH R +TLE+VA LA ++VFCLD SRLT+LAESA+GRLLPL++HRRPDA Sbjct: 181 VFVGGYSRHHRERAKTLERVARLADSHEVVFCLDASRLTKLAESAIGRLLPLRQHRRPDA 240 Query: 241 IARIARLPLFGRDLYELFGSAKIVLNGAIDMAGKDRGNMRCFEAMGCGALLVSDAGNYPE 300 IA IAR P+FGRDLYEL GSAKI LNG+IDMAG+DRGNMRCFE+MGCGALLVSDAG Y + Sbjct: 241 IAAIARPPVFGRDLYELIGSAKIALNGSIDMAGEDRGNMRCFESMGCGALLVSDAGRYID 300 Query: 301 GMDPGRTIVTYEAGNDCLAQIENSLRNWDDMKARAERGRRAVGDLYSKERQWVLFENLLE 360 GM+ G TI TY+ I SL++W A GR + D+Y K+ QW LF ++ Sbjct: 301 GMESGITIETYDTPEHAAEVIARSLQDWPRSAEIAALGRARIRDIYHKDMQWKLFVEVVG 360 Query: 361 RI 362 R+ Sbjct: 361 RL 362 >ref|YP_766426.1| hypothetical protein RL0816 [Rhizobium leguminosarum bv. viciae 3841] emb|CAK06311.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 363 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 203/359 (56%), Positives = 255/359 (71%), Gaps = 1/359 (0%) Query: 1 MRLFQNSGLYPSYLPRLNQLAAKASSFDARRDVFLHDRFGAAHFLKPVLDGAADAFFTNG 60 MR+FQNSG+Y +Y+ RL+ LA A SF R +FL DR+GA H L+PV++ + D FFTNG Sbjct: 1 MRVFQNSGVYAAYMRRLDMLAVDARSFSDRLALFLDDRYGACHILQPVMETSPDIFFTNG 60 Query: 61 DDEVLQRQWARERGMKEAPTLEAILLAQIEHHRTEVFYNLDPVRYPSAFVAKLPGCVKKT 120 DDE+LQR WA E G+ +E ILL+QIEHHRTE+FYN DP+RY + FV KLPGCV+K+ Sbjct: 61 DDEILQRYWAVENGLPATSDMEQILLSQIEHHRTEIFYNSDPMRYGNDFVRKLPGCVRKS 120 Query: 121 LCWRAAPSGSADLTAYGAVLGNFPSILEAWRSKGCRAELFFPAIDPVMEQYGHS-ERPID 179 + WRAAPSG+ D AY ++ NFP IL+ +R G RAE F PA DP M+ Y + +RPID Sbjct: 121 IMWRAAPSGNTDFGAYDLIVCNFPVILDGYRKLGWRAEYFAPAHDPAMDSYAENRDRPID 180 Query: 180 VAFVGGYSRHHSARGRTLEQVAALAADRKIVFCLDVSRLTRLAESAVGRLLPLQKHRRPD 239 V FVGGYSRHH R L+ V+A+ D K+ + LD SRLTRLAES +G LLPL KHRRP Sbjct: 181 VLFVGGYSRHHRRRAEILQAVSAIRRDFKVYYHLDRSRLTRLAESPIGWLLPLGKHRRPK 240 Query: 240 AIARIARLPLFGRDLYELFGSAKIVLNGAIDMAGKDRGNMRCFEAMGCGALLVSDAGNYP 299 I ++R PLFGR+LYE AKIVLNGA+DMAG DRGNMRC+EA+GCGAL+VSD+G YP Sbjct: 241 NIRAVSRTPLFGRELYEAISQAKIVLNGAVDMAGTDRGNMRCWEALGCGALMVSDSGVYP 300 Query: 300 EGMDPGRTIVTYEAGNDCLAQIENSLRNWDDMKARAERGRRAVGDLYSKERQWVLFENL 358 EGM ++VTYE I N LR + ++A A G R V +Y+K QW+ F+ L Sbjct: 301 EGMVNNISMVTYEDAESAARTIVNLLREPERLQALANEGTRTVRTVYNKRAQWLNFQRL 359 >emb|CAE00212.1| hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 363 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/359 (56%), Positives = 255/359 (71%), Gaps = 1/359 (0%) Query: 1 MRLFQNSGLYPSYLPRLNQLAAKASSFDARRDVFLHDRFGAAHFLKPVLDGAADAFFTNG 60 MR+FQNSG+Y +Y+ RL+ LA A SF R +FL DR+GA H L+PV++ + D FFTNG Sbjct: 1 MRVFQNSGVYAAYMRRLDMLAVDARSFSDRLALFLDDRYGACHILQPVMETSPDIFFTNG 60 Query: 61 DDEVLQRQWARERGMKEAPTLEAILLAQIEHHRTEVFYNLDPVRYPSAFVAKLPGCVKKT 120 DDE+LQR WA E G+ +E ILL+QIEHHRTE+FYN DP+RY + FV+KLPGCV+K+ Sbjct: 61 DDEILQRYWAVENGLPATSDMEQILLSQIEHHRTEIFYNSDPMRYGNDFVSKLPGCVRKS 120 Query: 121 LCWRAAPSGSADLTAYGAVLGNFPSILEAWRSKGCRAELFFPAIDPVMEQYGHS-ERPID 179 + WRAA SG+ D AY ++ NFP IL+ +R G RAE F PA DP M+ Y + +RPID Sbjct: 121 IMWRAAASGNTDFGAYDLIVCNFPVILDGYRKLGWRAEYFAPAHDPAMDSYAENRDRPID 180 Query: 180 VAFVGGYSRHHSARGRTLEQVAALAADRKIVFCLDVSRLTRLAESAVGRLLPLQKHRRPD 239 V FVGGYSRHH R L+ V+A+ D K+ + LD SRLTRLAES +G LLPL KHRRP Sbjct: 181 VLFVGGYSRHHRRRAEILQAVSAIRRDFKVYYHLDRSRLTRLAESPIGWLLPLGKHRRPK 240 Query: 240 AIARIARLPLFGRDLYELFGSAKIVLNGAIDMAGKDRGNMRCFEAMGCGALLVSDAGNYP 299 I ++R PLFGR+LYE AKIVLNGA+DMAG DRGNMRC+EA+GCGAL+VSD+G YP Sbjct: 241 NIRAVSRTPLFGRELYEAISQAKIVLNGAVDMAGTDRGNMRCWEALGCGALMVSDSGVYP 300 Query: 300 EGMDPGRTIVTYEAGNDCLAQIENSLRNWDDMKARAERGRRAVGDLYSKERQWVLFENL 358 EGM ++VTYE I N LR + ++A A G R V +Y+K QW+ F+ L Sbjct: 301 EGMVNNISMVTYEDAESAARTIVNLLREPERLQALANEGTRTVRTVYNKRAQWLNFQRL 359 >ref|ZP_03507978.1| hypothetical protein RetlB5_23085 [Rhizobium etli Brasil 5] Length = 328 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/326 (56%), Positives = 227/326 (69%), Gaps = 1/326 (0%) Query: 34 FLHDRFGAAHFLKPVLDGAADAFFTNGDDEVLQRQWARERGMKEAPTLEAILLAQIEHHR 93 F FGA H LKPV+DG ADAFFT GDD + QR WA E G+ T E +LL+QIEHHR Sbjct: 1 FFRISFGACHLLKPVIDGDADAFFTTGDDVITQRFWATEHGLAANTTPEQVLLSQIEHHR 60 Query: 94 TEVFYNLDPVRYPSAFVAKLPGCVKKTLCWRAAPSGSADLTAYGAVLGNFPSILEAWRSK 153 TEVFYNLDPVRY + F+ KLPG VK+++ WRAAPSG+AD AY ++ NFP+IL+++R + Sbjct: 61 TEVFYNLDPVRYGNDFIKKLPGTVKRSIAWRAAPSGNADFGAYNLLVCNFPTILQSYRDR 120 Query: 154 GCRAELFFPAIDPVMEQYG-HSERPIDVAFVGGYSRHHSARGRTLEQVAALAADRKIVFC 212 G RAE F P DP M+ Y + RPIDV FVGGYSRHH R LE V+ L D ++V+ Sbjct: 121 GWRAEYFAPGHDPEMDGYADNGNRPIDVLFVGGYSRHHRKRAEILEAVSELRKDFRVVYR 180 Query: 213 LDVSRLTRLAESAVGRLLPLQKHRRPDAIARIARLPLFGRDLYELFGSAKIVLNGAIDMA 272 LD SRLTRLAE+ +G LLPL HRRP I ++ P+FGRDLY AKIVLNGA+DMA Sbjct: 181 LDRSRLTRLAEAPLGWLLPLNAHRRPKGIRAVSSQPVFGRDLYRAISQAKIVLNGAVDMA 240 Query: 273 GKDRGNMRCFEAMGCGALLVSDAGNYPEGMDPGRTIVTYEAGNDCLAQIENSLRNWDDMK 332 G DRGNMRC+EA+GCGAL+VSDAGNYP+GM +TI+TY+ +A I + L + ++ Sbjct: 241 GSDRGNMRCWEALGCGALMVSDAGNYPDGMIDRKTIITYDNAQSAVASIRSLLADQTGLR 300 Query: 333 ARAERGRRAVGDLYSKERQWVLFENL 358 A G + + YSKE QW F L Sbjct: 301 EIAVAGNKMIKSRYSKEAQWSRFTQL 326 >ref|ZP_08422271.1| hypothetical protein Desaf_1032 [Desulfovibrio africanus str. Walvis Bay] gb|EGJ49376.1| hypothetical protein Desaf_1032 [Desulfovibrio africanus str. Walvis Bay] Length = 359 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 93/365 (25%), Positives = 151/365 (41%), Gaps = 36/365 (9%) Query: 1 MRLFQNSGLYPSYLPRL--NQLAAKASSFDARRDVFLHDRFGAAHFLK-PVLDGAADAFF 57 M+ Q YP+Y L A ++ + +V L D FGA H+ P+ D D+ Sbjct: 1 MKFLQVLTFYPAYSEALYARHPALAHLPYEKQLNVILRDGFGALHYFGLPMRDLGWDSRI 60 Query: 58 TNGDDEVLQRQWARERG---MKEAPTLEAILLAQIEHHRTEVFYNLDPVRYPSAFVAKLP 114 + LQ W + + ++ +L QIE +V + D V + S FV L Sbjct: 61 VLANVPQLQAAWMAQNNPARLAAGASIIDVLRLQIESFAPDVLFISDSVAFQSQFVRTLA 120 Query: 115 GCVKKTLCWRAAP-SGSADLTAYGAVLGNFPSILEAWRSKGCR-AELFFPAI-----DPV 167 + WRAA D + +L + + G R AE F+P D V Sbjct: 121 VRPRIVSGWRAANIPPDTDWQEFDLILSHLSGCRKKALEHGAREAEFFYPGFPGFVHDAV 180 Query: 168 MEQYGHSERPIDVAFVGGYSRHHSARGRTLEQVAALAADR--KIVFCLDVSRLTRLAESA 225 +Q +D+ F G ++ H+AR R L + A A + K+ + L V+ +++ Sbjct: 181 KDQTA----DLDLIFCGQWTPEHAARNRMLFRAAMQARSKGWKLEYHLHVNGSGKMS--- 233 Query: 226 VGRLLPLQKHRRPDAIARIARLPLFGRDLYELFGSAKIVLNGAIDMAGKDRGNMRCFEAM 285 A+ + +G D++ +I N ID+AG + GNMR FE Sbjct: 234 -------------SALESVMHSAKWGLDMFRTLRRGRISFNAEIDLAGGEAGNMRLFETT 280 Query: 286 GCGALLVSD-AGNYPEGMDPGRTIVTYEAGNDCLAQIENSLRNWDDMKARAERGRRAVGD 344 G GA L++ N +P R IVT+ + + L + + + + +A AERG R Sbjct: 281 GVGAFLMTQHHANISRYFEPDREIVTFGSEEEFLEKAAYYIEHDAEREAIAERGMRRCQT 340 Query: 345 LYSKE 349 +S E Sbjct: 341 EHSLE 345