BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0154.0006.p (821 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_316665.1| histidine kinase [Nitrobacter winogradskyi Nb-2... 1201 0.0 ref|NP_767397.1| two-component hybrid sensor and regulator [Brad... 1200 0.0 ref|YP_530276.1| PAS/PAC sensor signal transduction histidine ki... 1199 0.0 ref|YP_001202300.1| putative sensor histidine kinase [Bradyrhizo... 1197 0.0 gb|AAB97416.1| putative sensor protein [Bradyrhizobium japonicum] 1193 0.0 >ref|YP_316665.1| histidine kinase [Nitrobacter winogradskyi Nb-255] gb|ABA03313.1| histidine kinase [Nitrobacter winogradskyi Nb-255] Length = 838 Score = 1201 bits (3108), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/831 (69%), Positives = 685/831 (82%), Gaps = 10/831 (1%) Query: 1 MRRTLLSCTSLARDGMIGLAITALLPARTSFAAESLVTQAMSDHF-GFNHQEVAVLATSL 59 MRRTLLSCTSL G+ G +L+ ++AAE + + + F + Q++ LA +L Sbjct: 8 MRRTLLSCTSLVPGGIAGAGAVSLIDTSPAWAAEPALNERLIQAFMNLSRQDLTALAMAL 67 Query: 60 ALVGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSDRLRALLFVEPQVLISWAAGDN 119 ++ FS VAAILLMRTR+RA NE++L+SE+ +LQ+++DR RALLFVEPQ+LISW AG+ Sbjct: 68 GVLSFSVVAAILLMRTRIRAAANEQRLRSELRELQSEADRFRALLFVEPQILISWGAGEE 127 Query: 120 RPQISGDISLVMSQEGS-PQRVLAFGTWLPPEPALQMDHAVDALREKGEAFLLNLSTSAG 178 RPQISGDI+L++ Q+ P R+LAFGTWLPPEPALQMDHAVDALR GE FLLNL TSAG Sbjct: 128 RPQISGDIALLLPQDAKQPLRILAFGTWLPPEPALQMDHAVDALRSAGEGFLLNLVTSAG 187 Query: 179 RAIEAMGRAIGGQAIVR--------RELAESNLRYKTLQEETELLRDFAAAAPWPIWAKS 230 R +EAMGRAIGGQAIVR R+LAE LR+ +L ETE+LR FA AAPWP+WA+ Sbjct: 188 RTVEAMGRAIGGQAIVRIRDLGGLRRDLAEMTLRHDSLLAETEMLRAFATAAPWPLWARG 247 Query: 231 LEGNLRYANAAYVRATEGRSVSDALQRNLELLESDQRTELTRALNDNANYAARLPIVVSG 290 +G L +AN AY RATE +DA+QRNLELL+S+ RT ++RALND+A +AARLPI++ G Sbjct: 248 KDGKLSFANQAYARATEAADSADAIQRNLELLDSEDRTAMSRALNDHATFAARLPIIIGG 307 Query: 291 ERRIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLDQLSSGVAVFDADRRL 350 ERR+YDV AL+ GGSAGIA+DASEA AL A+ARM +AHRRTLDQLSSGVAVFD RRL Sbjct: 308 ERRMYDVHALRTGGGSAGIALDASEATALSGALARMADAHRRTLDQLSSGVAVFDGQRRL 367 Query: 351 TFYNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRAWKAKLHEAYRAVESE 410 FYN+SYRRLW LD+ FLDG+PDDSSVLDRLRA RKLPEQPDFRAWKA+LHEAYRA E+ Sbjct: 368 AFYNDSYRRLWDLDRPFLDGHPDDSSVLDRLRAGRKLPEQPDFRAWKARLHEAYRANEAV 427 Query: 411 TYTWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLTRVQRETLDNLGEAVA 470 W+LPDGRA+S+VTTPN EGGVTYLFD+VTESLDLARRYDRL VQRETLD+L EAVA Sbjct: 428 KDVWYLPDGRALSIVTTPNPEGGVTYLFDDVTESLDLARRYDRLINVQRETLDSLTEAVA 487 Query: 471 VFGSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALCRPLFDDALTWRTLREQITAIE 530 VFGSNGRA+LFNP FA+MWKL +AL +PHI+ VEA C+PLFDD WRT+ + +T I+ Sbjct: 488 VFGSNGRAQLFNPAFARMWKLSPEALAQQPHIDTVEAWCKPLFDDDDAWRTIHKAVTGID 547 Query: 531 NRAQVALKLERKDGSVLNCMTIPLPDGKTLLAFQDITDTENVERALRERNEALEAADQMK 590 NR V LKLERKDGS+L+CMT+PLPDG T+L F DITD+ENVERALRERN+ALEAADQMK Sbjct: 548 NRTAVPLKLERKDGSILDCMTMPLPDGATMLTFHDITDSENVERALRERNDALEAADQMK 607 Query: 591 VDFVHHVSYELRAPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALTNNILD 650 VDFVHHVSYELR+PLTTIIGFAH ++DP TGPLT KQAEY++Y+T ST+ALLALTNNILD Sbjct: 608 VDFVHHVSYELRSPLTTIIGFAHLMNDPGTGPLTEKQAEYVNYITSSTDALLALTNNILD 667 Query: 651 LATIDAGAMKLELGPVNIGQAIEAAAEGIQDRLATDRITLKVDIEPDIGAFVGDERRVVQ 710 LATIDAGAM LELGPV++ + I AAAEGIQDRL DRI L VD++PDIG F+GDERR++Q Sbjct: 668 LATIDAGAMTLELGPVDVRKTIAAAAEGIQDRLTRDRIVLNVDVDPDIGDFIGDERRIIQ 727 Query: 711 VLYNLLANAVGFSPHDATVTISAHRTEHSVVFAVTDAGPGIPAEMRDKVFNWFESHSHGS 770 VLYNLLANA GFSP DA +T+SA RTEHSV FAV D GPGIP ++RDK F+WFES+++GS Sbjct: 728 VLYNLLANAAGFSPPDAVITVSARRTEHSVRFAVMDEGPGIPPDVRDKAFDWFESYANGS 787 Query: 771 RHRGAGLGLSLVRSFVELHGGRVRVDSTVGRGTTVTCDFPIDQTAHRNAAE 821 RHRGAGLGLSLVRSFVELHGGRV D + GT V CDFP+D+ AHRNAAE Sbjct: 788 RHRGAGLGLSLVRSFVELHGGRVHFDPAIKSGTRVVCDFPLDRGAHRNAAE 838 >ref|NP_767397.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC46022.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] Length = 862 Score = 1200 bits (3104), Expect = 0.0, Method: Compositional matrix adjust. Identities = 616/829 (74%), Positives = 703/829 (84%), Gaps = 10/829 (1%) Query: 1 MRRTLLSCTSLARDGMIGLAITALLPARTSFAAESLVTQAMSDHFGFNHQEVAVLATSLA 60 MRRTLLSCTSL RDG+IG A+ ALLPA + AA+ + T +S+ FN QE+AVLAT+LA Sbjct: 36 MRRTLLSCTSLVRDGLIGSALAALLPAAPAEAADFVGT--LSELLDFNRQELAVLATALA 93 Query: 61 LVGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSDRLRALLFVEPQVLISWAAGDNR 120 L+GFS +AAILLMRTRVR +NE +L++ I +LQ Q+DR ALLF EPQ+LISW AGDNR Sbjct: 94 LLGFSVMAAILLMRTRVRTAKNEARLRARIGELQLQADRFGALLFAEPQILISWPAGDNR 153 Query: 121 PQISGDISLVMSQEGSPQRVLAFGTWLPPEPALQMDHAVDALREKGEAFLLNLSTSAGRA 180 QISGD+S+V+ ++ SPQRVLAFGTWLPPEPALQMDHAVDALR++G+ F L L+T+ G Sbjct: 154 AQISGDVSMVLPRDSSPQRVLAFGTWLPPEPALQMDHAVDALRDRGDGFQLTLTTAHGHT 213 Query: 181 IEAMGRAIGGQAIV--------RRELAESNLRYKTLQEETELLRDFAAAAPWPIWAKSLE 232 +EA+GRAIGGQAIV RR+LAE+NLRYK L +ETE+LR FAAAAPWPIWAK Sbjct: 214 LEAIGRAIGGQAIVRIRELSGLRRDLAETNLRYKALSDETEMLRGFAAAAPWPIWAKGEN 273 Query: 233 GNLRYANAAYVRATEGRSVSDALQRNLELLESDQRTELTRALNDNANYAARLPIVVSGER 292 G L +AN AYVRATE S SDA +R LELL+S R + R L D AN+ +RLPIV+ GER Sbjct: 274 GALTFANPAYVRATEAASFSDAHERKLELLDSADRGAMERGLKDAANFTSRLPIVIGGER 333 Query: 293 RIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLDQLSSGVAVFDADRRLTF 352 RIYDV+A+ + GS G+AIDASEA AL +A+ RM EAHRRTLDQLSSGVAVFD RRL F Sbjct: 334 RIYDVRAVNVGSGSVGVAIDASEADALSSALVRMAEAHRRTLDQLSSGVAVFDGHRRLAF 393 Query: 353 YNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRAWKAKLHEAYRAVESETY 412 YN+SYRRLW LD+ FLD NPDDSSVLD+LRA RKLPEQPDFRAWKAKLHEAYRAVE+ Sbjct: 394 YNDSYRRLWDLDRTFLDANPDDSSVLDQLRAARKLPEQPDFRAWKAKLHEAYRAVEAAKD 453 Query: 413 TWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLTRVQRETLDNLGEAVAVF 472 TW+LPDGRA+SVVTTPN EGGVTYLFD+VTESL+LARR+D + RVQRETLD+L E VAVF Sbjct: 454 TWYLPDGRALSVVTTPNPEGGVTYLFDDVTESLELARRFDGMIRVQRETLDSLAEGVAVF 513 Query: 473 GSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALCRPLFDDALTWRTLREQITAIENR 532 GSNG+A+LFNP F +MWKL +DA++ EPHI+ VE C LFDD + WR +RE +T+IE+R Sbjct: 514 GSNGKAQLFNPAFVRMWKLSSDAMRDEPHIQTVEGWCHQLFDDPVVWRQIREAVTSIESR 573 Query: 533 AQVALKLERKDGSVLNCMTIPLPDGKTLLAFQDITDTENVERALRERNEALEAADQMKVD 592 A V LKL+RKDGSVL+ M PL DG T+L FQDITDTENVERALRERNEALEAADQMKVD Sbjct: 574 ADVPLKLDRKDGSVLDGMIRPLHDGATMLTFQDITDTENVERALRERNEALEAADQMKVD 633 Query: 593 FVHHVSYELRAPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALTNNILDLA 652 FVHHVSYELR+PLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALTNNILDLA Sbjct: 634 FVHHVSYELRSPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALTNNILDLA 693 Query: 653 TIDAGAMKLELGPVNIGQAIEAAAEGIQDRLATDRITLKVDIEPDIGAFVGDERRVVQVL 712 TIDAGAMKLELGPV++ + IE AAEGIQDRLATDRI LKV+I PDIG+F+GDE+RVVQVL Sbjct: 694 TIDAGAMKLELGPVDVSKTIELAAEGIQDRLATDRIRLKVEIAPDIGSFIGDEKRVVQVL 753 Query: 713 YNLLANAVGFSPHDATVTISAHRTEHSVVFAVTDAGPGIPAEMRDKVFNWFESHSHGSRH 772 YNLLANAVGFSP D+TV ISA RTEHSVVF VTD+GPGIPA+M+DKVFNWFES S GSRH Sbjct: 754 YNLLANAVGFSPQDSTVGISARRTEHSVVFTVTDSGPGIPADMKDKVFNWFESRSQGSRH 813 Query: 773 RGAGLGLSLVRSFVELHGGRVRVDSTVGRGTTVTCDFPIDQTAHRNAAE 821 RGAGLGLSLVRSFVELHGG+VRVDS VGRGT V CDFP DQ AHR+AAE Sbjct: 814 RGAGLGLSLVRSFVELHGGKVRVDSIVGRGTVVICDFPTDQAAHRDAAE 862 >ref|YP_530276.1| PAS/PAC sensor signal transduction histidine kinase [Rhodopseudomonas palustris BisB18] gb|ABD85957.1| PAS/PAC sensor signal transduction histidine kinase [Rhodopseudomonas palustris BisB18] Length = 843 Score = 1199 bits (3102), Expect = 0.0, Method: Compositional matrix adjust. Identities = 591/836 (70%), Positives = 677/836 (80%), Gaps = 15/836 (1%) Query: 1 MRRTLLSCTSLARDGMIGLAITALLPARTSFAAESLVTQAMSDHFGFNHQEVAVLATSLA 60 MRRTLLSCT+ AR G +A+ + AAE+ V A++ F F+ Q++ L ++A Sbjct: 8 MRRTLLSCTAPARSGGAAVALAMWASVSPASAAETPVDSALAALFDFSRQDIIALTMAVA 67 Query: 61 LVGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSDRLRALLFVEPQVLISWAAGDNR 120 ++GFS VAAILLMRTR+RA E +L+ I LQ ++DR RALLF E QVLI+WAAGD+R Sbjct: 68 VLGFSVVAAILLMRTRLRAAACETRLRGNIQTLQVEADRFRALLFAESQVLIAWAAGDSR 127 Query: 121 PQISGDISLVMSQEG-------SPQRVLAFGTWLPPEPALQMDHAVDALREKGEAFLLNL 173 PQISGD+SL++ Q G QR+LAFGTW+PPEPAL+MDHAVDAL E GE F LNL Sbjct: 128 PQISGDVSLLIPQAGLAADQSVQSQRILAFGTWMPPEPALKMDHAVDALLESGEGFQLNL 187 Query: 174 STSAGRAIEAMGRAIGGQAIVR--------RELAESNLRYKTLQEETELLRDFAAAAPWP 225 TS GR+IEA+GRA+GGQAIVR RELAE R+KTLQEETE+LRDFAAAAPWP Sbjct: 188 VTSTGRSIEAVGRAVGGQAIVRMRELSGLRRELAEMTQRHKTLQEETEMLRDFAAAAPWP 247 Query: 226 IWAKSLEGNLRYANAAYVRATEGRSVSDALQRNLELLESDQRTELTRALNDNANYAARLP 285 IW + G L +ANAAY RATE SV++A++RNLELLES+ RT L+RALNDNAN++ARLP Sbjct: 248 IWTRRDAGELNFANAAYARATEAGSVAEAIERNLELLESNDRTALSRALNDNANFSARLP 307 Query: 286 IVVSGERRIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLDQLSSGVAVFD 345 IVV GERRIYDV A+K+ GGSAG AIDASEA AL AA+ RM EAHRRTLDQLSSGVAVFD Sbjct: 308 IVVRGERRIYDVHAMKVRGGSAGAAIDASEAYALGAALVRMAEAHRRTLDQLSSGVAVFD 367 Query: 346 ADRRLTFYNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRAWKAKLHEAYR 405 RL FYN+SYRRLW LD+AFLD NPDDSSVLDRLRA RKLPEQP+FR WK +LHEAYR Sbjct: 368 EQHRLAFYNDSYRRLWDLDRAFLDSNPDDSSVLDRLRAARKLPEQPNFREWKMRLHEAYR 427 Query: 406 AVESETYTWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLTRVQRETLDNL 465 AV+ W+LPDGRA+S+VTTPN EGGVTYLFD+VTESL+LARR+D L VQRETLDNL Sbjct: 428 AVDPAKDVWYLPDGRAVSIVTTPNPEGGVTYLFDDVTESLELARRFDGLINVQRETLDNL 487 Query: 466 GEAVAVFGSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALCRPLFDDALTWRTLREQ 525 EAVAVFGSNG A LFNPPFA+MW L +ALQ +PHIE V CRPLFDD W+TLR Sbjct: 488 AEAVAVFGSNGCARLFNPPFARMWNLSPEALQLQPHIETVVDWCRPLFDDPAIWQTLRGA 547 Query: 526 ITAIENRAQVALKLERKDGSVLNCMTIPLPDGKTLLAFQDITDTENVERALRERNEALEA 585 IT IENR + LKLER+DGSVLNCMT+PLPDG T+L FQDITDTENVERALRERNEALE Sbjct: 548 ITGIENRIAIPLKLERRDGSVLNCMTMPLPDGATMLTFQDITDTENVERALRERNEALET 607 Query: 586 ADQMKVDFVHHVSYELRAPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALT 645 ADQMKVDFVHHVSYELR+PLTTIIGFAHFLSDPSTGPLT KQ EYL Y+T STNALLA+ Sbjct: 608 ADQMKVDFVHHVSYELRSPLTTIIGFAHFLSDPSTGPLTEKQEEYLSYITTSTNALLAII 667 Query: 646 NNILDLATIDAGAMKLELGPVNIGQAIEAAAEGIQDRLATDRITLKVDIEPDIGAFVGDE 705 NNILDLATIDAGAM L LG V+I +AI A EGIQDRLA D I L+V+ PD+G F+ DE Sbjct: 668 NNILDLATIDAGAMTLNLGQVDIRKAIADAIEGIQDRLARDHIVLEVNAAPDVGHFIADE 727 Query: 706 RRVVQVLYNLLANAVGFSPHDATVTISAHRTEHSVVFAVTDAGPGIPAEMRDKVFNWFES 765 RRVVQVLYNLLANAVGFSP A +T+SA RTE +VVF VTD GPGIP ++++KVF+WFES Sbjct: 728 RRVVQVLYNLLANAVGFSPQHAAITLSAKRTEQTVVFTVTDTGPGIPPDVKEKVFDWFES 787 Query: 766 HSHGSRHRGAGLGLSLVRSFVELHGGRVRVDSTVGRGTTVTCDFPIDQTAHRNAAE 821 S+GSRHRGAGLGLSLVRSFVELHGG VR+DS VG+GTT+TC FPIDQ+ RNAAE Sbjct: 788 RSNGSRHRGAGLGLSLVRSFVELHGGNVRIDSVVGKGTTLTCSFPIDQSQQRNAAE 843 >ref|YP_001202300.1| putative sensor histidine kinase [Bradyrhizobium sp. ORS 278] emb|CAL74050.1| Putative sensor histidine kinase [Bradyrhizobium sp. ORS 278] Length = 835 Score = 1197 bits (3097), Expect = 0.0, Method: Compositional matrix adjust. Identities = 598/829 (72%), Positives = 690/829 (83%), Gaps = 9/829 (1%) Query: 1 MRRTLLSCTSLARDGMIGLAITALLPARTSFAAESLVTQAMSDHFGFNHQEVAVLATSLA 60 MR+TLLSCTSLAR G++GLA TAL PA FA + + A+S F + +VA + LA Sbjct: 8 MRQTLLSCTSLARKGLMGLAATALAPASQGFAGDGVPADAISSLFELSRSDVAEVTAMLA 67 Query: 61 LVGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSDRLRALLFVEPQVLISWAAGDNR 120 L+GFS VAAI L+RTR+ A R E +L++++ +LQ Q+DR RALLF EPQ+LI+W AG +R Sbjct: 68 LLGFSVVAAIALVRTRLAAARKEARLRADVAELQLQADRYRALLFAEPQILIAWPAGGHR 127 Query: 121 PQISGDISLVMSQEGSPQRVLAFGTWLPPEPALQMDHAVDALREKGEAFLLNLSTSAGRA 180 PQISGD S+++ + PQR+LAFG+WLPPEPALQ+DHAV+ALRE GE F+L+L+TS G A Sbjct: 128 PQISGDTSMLVPSD-QPQRILAFGSWLPPEPALQLDHAVEALREAGEGFMLHLTTSHGHA 186 Query: 181 IEAMGRAIGGQAIVR--------RELAESNLRYKTLQEETELLRDFAAAAPWPIWAKSLE 232 IEAMGRAIGGQAIVR RELAE+ LR+K L EETE LR A+A PWPIWA+ Sbjct: 187 IEAMGRAIGGQAIVRIRELSGLRRELAETQLRFKALGEETESLRALASALPWPIWARHAN 246 Query: 233 GNLRYANAAYVRATEGRSVSDALQRNLELLESDQRTELTRALNDNANYAARLPIVVSGER 292 G L Y NAAY RA + R + DA+ RNLELL+S R++L RAL ++ RLPIV+ GER Sbjct: 247 GALAYVNAAYARAADARDIPDAISRNLELLDSADRSDLQRALGAGGHFEGRLPIVMGGER 306 Query: 293 RIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLDQLSSGVAVFDADRRLTF 352 R++DV+A L GGSAG+AIDASEAAAL A+ RM EAHRRTLDQLSSGVAVFD RRL F Sbjct: 307 RMHDVRAFTLGGGSAGVAIDASEAAALTDALVRMHEAHRRTLDQLSSGVAVFDGQRRLAF 366 Query: 353 YNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRAWKAKLHEAYRAVESETY 412 YN+SYRRLW LD AFLD PDDSSVLDRLRA+RKLPEQ DFRAWKAKLHEAYRAVE+ Sbjct: 367 YNDSYRRLWDLDTAFLDSQPDDSSVLDRLRASRKLPEQADFRAWKAKLHEAYRAVEAAKD 426 Query: 413 TWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLTRVQRETLDNLGEAVAVF 472 TWFLPDGRA+SVVTTPN EGGVTYLFD+VTES LARRYD L RVQRETLD+L E VAVF Sbjct: 427 TWFLPDGRALSVVTTPNPEGGVTYLFDDVTESFALARRYDGLIRVQRETLDSLAEGVAVF 486 Query: 473 GSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALCRPLFDDALTWRTLREQITAIENR 532 GSNGR ELFNP FAKMW+L D+L+ PHI+ VE+ CR ++DD++ WRT+RE IT+IENR Sbjct: 487 GSNGRVELFNPAFAKMWRLSPDSLREHPHIDTVESWCRSIYDDSVAWRTIREAITSIENR 546 Query: 533 AQVALKLERKDGSVLNCMTIPLPDGKTLLAFQDITDTENVERALRERNEALEAADQMKVD 592 VALKLERKDGSVL+CM+ PLPDG T+L FQDITDTENVERALRE NEALEAA QMK+D Sbjct: 547 LDVALKLERKDGSVLDCMSRPLPDGATMLTFQDITDTENVERALRESNEALEAAGQMKID 606 Query: 593 FVHHVSYELRAPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALTNNILDLA 652 FVHHVSYELRAPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALTNNILDLA Sbjct: 607 FVHHVSYELRAPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALTNNILDLA 666 Query: 653 TIDAGAMKLELGPVNIGQAIEAAAEGIQDRLATDRITLKVDIEPDIGAFVGDERRVVQVL 712 TIDAGAMKLELGPV+ +AIEAAAEG+QDRLATDRI L+V++ PD+G+FVGDERRVVQVL Sbjct: 667 TIDAGAMKLELGPVDAAKAIEAAAEGVQDRLATDRIRLRVEVAPDVGSFVGDERRVVQVL 726 Query: 713 YNLLANAVGFSPHDATVTISAHRTEHSVVFAVTDAGPGIPAEMRDKVFNWFESHSHGSRH 772 YNLLANAVGFSP D+TV +SA RT+HSV FAVTD GPGIPA+++D++F+WF S S GSRH Sbjct: 727 YNLLANAVGFSPQDSTVIVSARRTDHSVAFAVTDCGPGIPADIKDQMFDWFVSRSQGSRH 786 Query: 773 RGAGLGLSLVRSFVELHGGRVRVDSTVGRGTTVTCDFPIDQTAHRNAAE 821 RGAGLGLSLVRSFVELHGG+VR+DS VG+GTTVTCDFP D A RNAAE Sbjct: 787 RGAGLGLSLVRSFVELHGGKVRMDSVVGKGTTVTCDFPTDHIAQRNAAE 835 >gb|AAB97416.1| putative sensor protein [Bradyrhizobium japonicum] Length = 873 Score = 1193 bits (3086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 607/831 (73%), Positives = 695/831 (83%), Gaps = 12/831 (1%) Query: 1 MRRTLLSCTSLARDGMIGLAITALLPARTSFAAESLVTQAMSDHFGFNHQEVAVLATSLA 60 MRRTLLSCTSL RDG+IG A+ ALLPA AA+ + T +S+ FN QE+ VL T+LA Sbjct: 45 MRRTLLSCTSLVRDGLIGSALAALLPAAPDEAADFVGT--LSELLDFNRQELVVLVTALA 102 Query: 61 LVGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSDRLRALLFVEPQVLISWAAGDNR 120 L+GFS +AAILLMRTRVR +NE +L++ I +LQ Q+DR ALLF EPQ+LISW AGDNR Sbjct: 103 LLGFSVMAAILLMRTRVRTAKNEARLRARIGELQLQADRFGALLFAEPQILISWPAGDNR 162 Query: 121 PQISGDISLVMSQEGSPQRVLAFGTWLPPEPALQMDHAVDALREKGEAFLLNLSTSAGRA 180 QISGD+S+V+ ++ SPQRVLAFGTWL PEPALQMDHAVDALR++G+ F L L+T+ G Sbjct: 163 AQISGDVSMVLPRDSSPQRVLAFGTWLSPEPALQMDHAVDALRDRGDGFQLTLTTAHGHT 222 Query: 181 IEAMGRAIGGQAIVR--------RELAESNLRYKTLQEETELLRDFAAAAPWPIWAKSLE 232 +EA+GRAIGGQAIVR R+LAE+NLRYK L +ETE+LR FAAAAPWPIWAK Sbjct: 223 LEAIGRAIGGQAIVRIRELSGLRRDLAETNLRYKALSDETEMLRGFAAAAPWPIWAKGEN 282 Query: 233 GNLRYANAAYVRATEGRSVSDALQRNLE-LLESDQRTELTRALNDNANYAARLPIVVSGE 291 G L +AN AYVRATE S SD +R+ LL+S R + R L D AN+ +RLPIV++ Sbjct: 283 GALTFANPAYVRATEAASFSDVHERHASSLLDSADRGAMERGLKDAANFTSRLPIVIAAS 342 Query: 292 RRIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLDQLSSGVAVFDADRRLT 351 RIYDV+A+ + GS G+AIDASEA AL +A+ RM EAHRRTLDQLSSGVAVFD RRL Sbjct: 343 ARIYDVRAVNVGSGSVGVAIDASEADALSSALVRMAEAHRRTLDQLSSGVAVFDGHRRLA 402 Query: 352 FYNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRAWKAKLHEAYRAVESET 411 FYN+SYRRLW LD+ FLD NPDDSSVLD+LRA RKLPEQPDFRAWKAKLHEAYRAVE+ Sbjct: 403 FYNDSYRRLWDLDRTFLDANPDDSSVLDQLRAARKLPEQPDFRAWKAKLHEAYRAVEAAK 462 Query: 412 YTWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLTRVQRETLDNLGEAVAV 471 TW+LPDGRA+SVVTTPN EGGVTYLFD+VTESL+LARR+D + RVQRETLD+L E VAV Sbjct: 463 DTWYLPDGRALSVVTTPNPEGGVTYLFDDVTESLELARRFDGMIRVQRETLDSLAEGVAV 522 Query: 472 FGSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALCRPLFDDALTWRTLREQITAIEN 531 FGSNG+A+LFNP F +MWKL +DA++ EPHI+ VE C LFDD + WR +RE +T+IE+ Sbjct: 523 FGSNGKAQLFNPAFVRMWKLSSDAMRDEPHIQTVEGWCHQLFDDPVVWRQIREAVTSIES 582 Query: 532 RAQVALKLERKDGSVLNCMTIPLPDGKTLLAFQDITDTENVERALRERNEALEAADQMKV 591 RA V LKL+RKDGSVL+ M PL DG T+L FQDITDTENVERALRERNEALEAADQMKV Sbjct: 583 RADVPLKLDRKDGSVLDGMIRPLHDGATMLTFQDITDTENVERALRERNEALEAADQMKV 642 Query: 592 DFVHHVSYELRAPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNAL-LALTNNILD 650 DFVHHVSYELR+PLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNAL LALTNNILD Sbjct: 643 DFVHHVSYELRSPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALALALTNNILD 702 Query: 651 LATIDAGAMKLELGPVNIGQAIEAAAEGIQDRLATDRITLKVDIEPDIGAFVGDERRVVQ 710 LATIDAGAMKLELGPV++ + IE AAEGIQDRLATDRI LKV+I PDIG+F+GDE+RVVQ Sbjct: 703 LATIDAGAMKLELGPVDVSKTIELAAEGIQDRLATDRIRLKVEIAPDIGSFIGDEKRVVQ 762 Query: 711 VLYNLLANAVGFSPHDATVTISAHRTEHSVVFAVTDAGPGIPAEMRDKVFNWFESHSHGS 770 VLYNLLANAVGFSP D+TV ISA RTEHSVVF VTD+GPGIPA+M+DKVFNWFES S GS Sbjct: 763 VLYNLLANAVGFSPQDSTVGISARRTEHSVVFTVTDSGPGIPADMKDKVFNWFESRSQGS 822 Query: 771 RHRGAGLGLSLVRSFVELHGGRVRVDSTVGRGTTVTCDFPIDQTAHRNAAE 821 RHRGAGLGLSLVRSFVELHGG+VRVDS VGRGT V CDFP DQ AHR+AAE Sbjct: 823 RHRGAGLGLSLVRSFVELHGGKVRVDSIVGRGTVVICDFPTDQAAHRDAAE 873