BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0154.0005.p (507 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767396.1| hypothetical protein bll0756 [Bradyrhizobium ja... 775 0.0 ref|YP_004106457.1| hypothetical protein Rpdx1_0080 [Rhodopseudo... 759 0.0 ref|YP_575415.1| hypothetical protein Nham_0054 [Nitrobacter ham... 756 0.0 ref|YP_001989119.1| hypothetical protein Rpal_0081 [Rhodopseudom... 754 0.0 ref|NP_945434.1| hypothetical protein RPA0078 [Rhodopseudomonas ... 752 0.0 >ref|NP_767396.1| hypothetical protein bll0756 [Bradyrhizobium japonicum USDA 110] dbj|BAC46021.1| bll0756 [Bradyrhizobium japonicum USDA 110] Length = 518 Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/505 (75%), Positives = 432/505 (85%), Gaps = 1/505 (0%) Query: 1 MTATSTFSVALANETATAELMADLALLIGAGDVITLSGDLGAGKTTAARALIRYLAADDA 60 M+A +TFSVAL NETATA+LMADLALL+G GDVITL+GDLGAGKT AARA+IRYLA D+A Sbjct: 1 MSAPTTFSVALHNETATAQLMADLALLVGPGDVITLTGDLGAGKTAAARAMIRYLADDEA 60 Query: 61 LEVPSPTFTLAQSYELPSYPLVHADLYRIKDASELEEIGLSPLPDDIVALIEWPERAPDA 120 LEVPSPTFTL Q YELP +P++HADLYR++D SELEEIGLSPLPD + LIEWPERAP A Sbjct: 61 LEVPSPTFTLVQGYELPPFPVMHADLYRVEDESELEEIGLSPLPDATLVLIEWPERAPSA 120 Query: 121 MPADRIDIAFSHRPALGSAARAAEITGHGKGAAKVARLNALRQFLDRAGFLNARRERMPG 180 +P DRIDIA +HRPALGS ARAA+ITG+GK AA+VARL ALR+FLD +G+L+A R RM G Sbjct: 121 LPEDRIDIALTHRPALGSNARAADITGYGKSAAQVARLKALREFLDASGYLDAMRRRMAG 180 Query: 181 DASTRSYARLRNDDGTVILMNSPRRPDGPAIYSGQSYSAAVHLAEDVRPFVAIGNGLRKH 240 DASTRSYARL DD VILMN P+RPDG A+Y+G+SYSAAVHLAE+V+PFVAI GLR Sbjct: 181 DASTRSYARLLRDDEIVILMNFPQRPDGAALYNGKSYSAAVHLAENVKPFVAIDEGLRAQ 240 Query: 241 GFSAPAIRHIDLGSGFLITEDFGAEGIIEGDPPQPIAERYEAAVDMLAALHREVLPEQLP 300 G SAPAI H DL GFLI+EDFG+EG+IEG+PP+PI ERYEAA D+LA LH + LPE LP Sbjct: 241 GISAPAIHHADLDHGFLISEDFGSEGVIEGNPPRPIPERYEAATDVLAVLHGKTLPETLP 300 Query: 301 LTSDESYDIPVFDIDAWLIEIGLMLEWYLPDRGVQPSEELRAEFLGMWRGLLEKPAAAPR 360 L +SY IPVFD +A LIEIGLM EWYLPDR SE RAEF MWR LL+KP AAPR Sbjct: 301 LDG-QSYAIPVFDTEAMLIEIGLMPEWYLPDRNAPLSEPKRAEFFAMWRELLKKPLAAPR 359 Query: 361 TWVIRDFHSPNIIWLAERTGILRVGVIDFQDALLGPAAYDVVSLLQDARIDVPEQLELSL 420 TW+IRD+HSPN+IWL RTGI RVGVIDFQD +LGP +YDVVSLLQDARIDVPE LEL+L Sbjct: 360 TWIIRDYHSPNLIWLGMRTGIERVGVIDFQDTVLGPQSYDVVSLLQDARIDVPENLELTL 419 Query: 421 LTRYIKARRATDESFDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRIWT 480 L+RYIKARRA D SFDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKP YL+HQPRIWT Sbjct: 420 LSRYIKARRAGDASFDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKPHYLRHQPRIWT 479 Query: 481 YLERSLAHPALTSFRIWYTANIPPP 505 YL+RSLAHPAL+ R WY AN+PPP Sbjct: 480 YLQRSLAHPALSHLRDWYLANVPPP 504 >ref|YP_004106457.1| hypothetical protein Rpdx1_0080 [Rhodopseudomonas palustris DX-1] gb|ADU41724.1| protein of unknown function UPF0079 [Rhodopseudomonas palustris DX-1] Length = 506 Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/506 (73%), Positives = 421/506 (83%) Query: 1 MTATSTFSVALANETATAELMADLALLIGAGDVITLSGDLGAGKTTAARALIRYLAADDA 60 M+A +TFSVALANE AT LMA++ALLIG GDV+TLSGDLGAGKT AARA+IRYLAADD Sbjct: 1 MSAAATFSVALANEAATTRLMAEVALLIGPGDVVTLSGDLGAGKTAAARAMIRYLAADDT 60 Query: 61 LEVPSPTFTLAQSYELPSYPLVHADLYRIKDASELEEIGLSPLPDDIVALIEWPERAPDA 120 LEVPSPTFTL Q+Y+LP YPL+HADLYR++D SELEEIGLSPLPD VALIEWPERA A Sbjct: 61 LEVPSPTFTLVQTYDLPPYPLLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAGAA 120 Query: 121 MPADRIDIAFSHRPALGSAARAAEITGHGKGAAKVARLNALRQFLDRAGFLNARRERMPG 180 +P DRIDIA SHRPALG +ARAAEITGHGK +V RL ALR F++ AG+ A R MPG Sbjct: 121 LPEDRIDIALSHRPALGPSARAAEITGHGKAVKQVERLAALRSFIETAGYAEAERLHMPG 180 Query: 181 DASTRSYARLRNDDGTVILMNSPRRPDGPAIYSGQSYSAAVHLAEDVRPFVAIGNGLRKH 240 DASTRSYARL+ +VILMN+PRRPDGPA+Y+G+SYSAAVHLAEDVRPFVAIG GLR+ Sbjct: 181 DASTRSYARLQRGTESVILMNAPRRPDGPALYAGKSYSAAVHLAEDVRPFVAIGQGLRER 240 Query: 241 GFSAPAIRHIDLGSGFLITEDFGAEGIIEGDPPQPIAERYEAAVDMLAALHREVLPEQLP 300 GFSAPAI H DL +GFLITED G+ G++EGDPP P+ RY+AA DMLAALH + LP+ LP Sbjct: 241 GFSAPAIHHADLDAGFLITEDLGSVGVVEGDPPAPVVARYQAATDMLAALHAKPLPDHLP 300 Query: 301 LTSDESYDIPVFDIDAWLIEIGLMLEWYLPDRGVQPSEELRAEFLGMWRGLLEKPAAAPR 360 L+ ESY +P FD DA +IE+GLM EWYLPDRGV P+E LRAEF+ +WR LL A R Sbjct: 301 LSPRESYAVPTFDEDAMMIEVGLMPEWYLPDRGVIPTEALRAEFVALWRKLLADIAREAR 360 Query: 361 TWVIRDFHSPNIIWLAERTGILRVGVIDFQDALLGPAAYDVVSLLQDARIDVPEQLELSL 420 TWV+RDFHSPN+IWL +R GI RVG+IDFQD +LGPAAYDVVSLLQDARIDVPE +ELSL Sbjct: 361 TWVLRDFHSPNLIWLGDRPGIERVGIIDFQDTVLGPAAYDVVSLLQDARIDVPEAVELSL 420 Query: 421 LTRYIKARRATDESFDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRIWT 480 L RY+KAR A D FD AGFA LYA+MSAQRNTRLLGTFARLNRRDGKP YLKHQPR+W Sbjct: 421 LGRYVKARLAADSEFDAAGFARLYAVMSAQRNTRLLGTFARLNRRDGKPHYLKHQPRVWA 480 Query: 481 YLERSLAHPALTSFRIWYTANIPPPV 506 YL RSLAHPAL R WY A +PPP+ Sbjct: 481 YLARSLAHPALAEVRAWYRAQVPPPL 506 >ref|YP_575415.1| hypothetical protein Nham_0054 [Nitrobacter hamburgensis X14] gb|ABE60955.1| protein of unknown function UPF0079 [Nitrobacter hamburgensis X14] Length = 507 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/505 (75%), Positives = 426/505 (84%) Query: 1 MTATSTFSVALANETATAELMADLALLIGAGDVITLSGDLGAGKTTAARALIRYLAADDA 60 MT STF+ ALANETATA LMADLALLIG GDVITLSGDLGAGKT AARA+IRYLA DD Sbjct: 1 MTGPSTFATALANETATAHLMADLALLIGPGDVITLSGDLGAGKTAAARAMIRYLAGDDT 60 Query: 61 LEVPSPTFTLAQSYELPSYPLVHADLYRIKDASELEEIGLSPLPDDIVALIEWPERAPDA 120 +EVPSPTFTLAQ Y+LP YPL+HADLYRI ELEEIGL+PLPD V LIEWPERA A Sbjct: 61 VEVPSPTFTLAQHYDLPCYPLLHADLYRINGPGELEEIGLAPLPDATVVLIEWPERAAGA 120 Query: 121 MPADRIDIAFSHRPALGSAARAAEITGHGKGAAKVARLNALRQFLDRAGFLNARRERMPG 180 +P DRIDIA SHRPALGSAARAAEITG+G AA+VARL ALR+FLD AG+L+A R+ M G Sbjct: 121 LPTDRIDIAISHRPALGSAARAAEITGYGNAAAQVARLAALRRFLDDAGYLDATRQHMAG 180 Query: 181 DASTRSYARLRNDDGTVILMNSPRRPDGPAIYSGQSYSAAVHLAEDVRPFVAIGNGLRKH 240 DASTRSYARL DG ILMN+PRRPDGPAI+ G+SYSAAVHLAEDV+PFVAI GLR H Sbjct: 181 DASTRSYARLIRSDGRFILMNAPRRPDGPAIHDGKSYSAAVHLAEDVKPFVAIARGLRDH 240 Query: 241 GFSAPAIRHIDLGSGFLITEDFGAEGIIEGDPPQPIAERYEAAVDMLAALHREVLPEQLP 300 GFSAPAI H DL SGFLITEDFG+ G +EG PP PIAERY+ A DMLAALH LPE LP Sbjct: 241 GFSAPAIHHADLESGFLITEDFGSAGFVEGTPPAPIAERYQVATDMLAALHCRTLPEILP 300 Query: 301 LTSDESYDIPVFDIDAWLIEIGLMLEWYLPDRGVQPSEELRAEFLGMWRGLLEKPAAAPR 360 + Y IPVFD +A L+E+GLML+WYL DRGV+PS++LRAEF+ MWR LL K AAAP+ Sbjct: 301 VAPHIPYTIPVFDTEAMLVEVGLMLDWYLTDRGVEPSDDLRAEFMAMWRVLLAKLAAAPK 360 Query: 361 TWVIRDFHSPNIIWLAERTGILRVGVIDFQDALLGPAAYDVVSLLQDARIDVPEQLELSL 420 TWV+RDFHSPN+IWL +R +VGVIDFQD +LGPAAYD+VSLLQDAR+DVPE LEL+L Sbjct: 361 TWVLRDFHSPNLIWLEQRRDTGKVGVIDFQDTVLGPAAYDLVSLLQDARVDVPESLELAL 420 Query: 421 LTRYIKARRATDESFDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRIWT 480 LTRY+KAR + + FDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKP YL+HQPRIWT Sbjct: 421 LTRYMKARLGSGQPFDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKPHYLRHQPRIWT 480 Query: 481 YLERSLAHPALTSFRIWYTANIPPP 505 YL RSLAHPAL++ R W+ A++PPP Sbjct: 481 YLTRSLAHPALSAIRAWHQAHVPPP 505 >ref|YP_001989119.1| hypothetical protein Rpal_0081 [Rhodopseudomonas palustris TIE-1] gb|ACE98643.1| protein of unknown function UPF0079 [Rhodopseudomonas palustris TIE-1] Length = 506 Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/506 (73%), Positives = 420/506 (83%) Query: 1 MTATSTFSVALANETATAELMADLALLIGAGDVITLSGDLGAGKTTAARALIRYLAADDA 60 M+A +TFSVALANE AT LMA++ALLIG GDV+TLSGDLGAGKT AARA+IRYLA DDA Sbjct: 1 MSAVATFSVALANEVATVRLMAEVALLIGPGDVVTLSGDLGAGKTAAARAMIRYLADDDA 60 Query: 61 LEVPSPTFTLAQSYELPSYPLVHADLYRIKDASELEEIGLSPLPDDIVALIEWPERAPDA 120 LEVPSPTFTL Q+Y+LP YPL+HADLYR++D SELEEIGLSPLPD VALIEWPERA A Sbjct: 61 LEVPSPTFTLVQTYDLPPYPLLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAGAA 120 Query: 121 MPADRIDIAFSHRPALGSAARAAEITGHGKGAAKVARLNALRQFLDRAGFLNARRERMPG 180 +P DRIDIA SHRPALG +ARAAEITGHGK +V RL ALR F++ AG+ +A R MPG Sbjct: 121 LPEDRIDIALSHRPALGPSARAAEITGHGKAVKQVERLAALRSFIETAGYADAERRHMPG 180 Query: 181 DASTRSYARLRNDDGTVILMNSPRRPDGPAIYSGQSYSAAVHLAEDVRPFVAIGNGLRKH 240 DASTRSYARL+ +VILMN+PRRPDGPA+Y+G+SYSAAVHLAEDVRPFVAIG GLR+ Sbjct: 181 DASTRSYARLQRGAESVILMNAPRRPDGPALYAGKSYSAAVHLAEDVRPFVAIGQGLRER 240 Query: 241 GFSAPAIRHIDLGSGFLITEDFGAEGIIEGDPPQPIAERYEAAVDMLAALHREVLPEQLP 300 GFSAPAI H DL +GFLITED G G +EGDPP P+ RY+AA DMLAALH + LP+ LP Sbjct: 241 GFSAPAIHHADLDAGFLITEDLGRIGFVEGDPPAPVVARYQAATDMLAALHAKPLPDHLP 300 Query: 301 LTSDESYDIPVFDIDAWLIEIGLMLEWYLPDRGVQPSEELRAEFLGMWRGLLEKPAAAPR 360 L++ ESY +P FD A +IE+GLM EWYLPDRG PSE LRAEF+ +WR LL A APR Sbjct: 301 LSTRESYAVPTFDEAAMMIEVGLMPEWYLPDRGAPPSEALRAEFVALWRKLLAGIATAPR 360 Query: 361 TWVIRDFHSPNIIWLAERTGILRVGVIDFQDALLGPAAYDVVSLLQDARIDVPEQLELSL 420 TWV+RD+HSPN+IWL +R GI RVGVIDFQD +LGPAAYDVVSLLQDARIDVPE ELSL Sbjct: 361 TWVLRDYHSPNLIWLEDRPGIERVGVIDFQDTVLGPAAYDVVSLLQDARIDVPEATELSL 420 Query: 421 LTRYIKARRATDESFDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRIWT 480 L RY+KAR A D FD GFA LYA+MSAQRNTRLLGTFARLNRRDGKPQYLKHQPR+W Sbjct: 421 LGRYVKARLAADPEFDAPGFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRVWA 480 Query: 481 YLERSLAHPALTSFRIWYTANIPPPV 506 YL RSLAHPAL R WY ++PPP+ Sbjct: 481 YLARSLAHPALAEVRAWYRDHVPPPL 506 >ref|NP_945434.1| hypothetical protein RPA0078 [Rhodopseudomonas palustris CGA009] emb|CAE25522.1| Protein of unknown function UPF0079 [Rhodopseudomonas palustris CGA009] Length = 506 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/506 (73%), Positives = 419/506 (82%) Query: 1 MTATSTFSVALANETATAELMADLALLIGAGDVITLSGDLGAGKTTAARALIRYLAADDA 60 M+A +TFSVALANE AT LMA++ALLIG GDV+TLSGDLGAGKT AARA+IRYLA DDA Sbjct: 1 MSAVATFSVALANEVATVRLMAEVALLIGPGDVVTLSGDLGAGKTAAARAMIRYLADDDA 60 Query: 61 LEVPSPTFTLAQSYELPSYPLVHADLYRIKDASELEEIGLSPLPDDIVALIEWPERAPDA 120 LEVPSPTFTL Q+Y+LP YPL+HADLYR++D SELEEIGLSPLPD VALIEWPERA A Sbjct: 61 LEVPSPTFTLVQTYDLPPYPLLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAGAA 120 Query: 121 MPADRIDIAFSHRPALGSAARAAEITGHGKGAAKVARLNALRQFLDRAGFLNARRERMPG 180 +P DRIDIA SHRPALG +ARAAEITGHGK +V RL ALR F++ AG+ +A R MPG Sbjct: 121 LPEDRIDIALSHRPALGPSARAAEITGHGKAVKQVERLAALRSFIETAGYADAERRHMPG 180 Query: 181 DASTRSYARLRNDDGTVILMNSPRRPDGPAIYSGQSYSAAVHLAEDVRPFVAIGNGLRKH 240 DASTRSYARL+ +VILMN+PRRPDGPA+Y+G+SYSAAVHLAEDVRPFVAIG GLR+ Sbjct: 181 DASTRSYARLQRGAESVILMNAPRRPDGPALYAGKSYSAAVHLAEDVRPFVAIGQGLRER 240 Query: 241 GFSAPAIRHIDLGSGFLITEDFGAEGIIEGDPPQPIAERYEAAVDMLAALHREVLPEQLP 300 GFSAPAI H DL +GFLITED G G +EGDPP P+ RY+AA DMLAALH + LP+ LP Sbjct: 241 GFSAPAIHHADLDAGFLITEDLGRIGFVEGDPPAPVVARYQAATDMLAALHAKPLPDHLP 300 Query: 301 LTSDESYDIPVFDIDAWLIEIGLMLEWYLPDRGVQPSEELRAEFLGMWRGLLEKPAAAPR 360 L++ ESY +P FD A +IE+GLM EWYLPDRG PSE LR EF+ +WR LL A APR Sbjct: 301 LSTRESYAVPTFDEAAMMIEVGLMPEWYLPDRGAPPSEALRVEFVALWRKLLAGIATAPR 360 Query: 361 TWVIRDFHSPNIIWLAERTGILRVGVIDFQDALLGPAAYDVVSLLQDARIDVPEQLELSL 420 TWV+RD+HSPN+IWL +R GI RVGVIDFQD +LGPAAYDVVSLLQDARIDVPE ELSL Sbjct: 361 TWVLRDYHSPNLIWLEDRPGIERVGVIDFQDTVLGPAAYDVVSLLQDARIDVPEAAELSL 420 Query: 421 LTRYIKARRATDESFDPAGFAELYAIMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRIWT 480 L RY+KAR A D FD GFA LYA+MSAQRNTRLLGTFARLNRRDGKPQYLKHQPR+W Sbjct: 421 LGRYVKARLAADPEFDAPGFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRVWA 480 Query: 481 YLERSLAHPALTSFRIWYTANIPPPV 506 YL RSLAHPAL R WY ++PPP+ Sbjct: 481 YLARSLAHPALAEVRAWYRDHVPPPL 506