BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0154.0003.p (247 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767394.1| nucleotidyltransferase family protein [Bradyrhi... 421 e-116 ref|YP_575417.1| nucleotidyl transferase [Nitrobacter hamburgens... 421 e-116 ref|NP_945432.1| nucleotidyl transferase [Rhodopseudomonas palus... 407 e-111 ref|YP_004106455.1| nucleotidyl transferase [Rhodopseudomonas pa... 404 e-111 ref|YP_001202303.1| putative nucleotidyl transferase family prot... 403 e-110 >ref|NP_767394.1| nucleotidyltransferase family protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46019.1| nucleotidyltransferase family protein [Bradyrhizobium japonicum USDA 110] Length = 240 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 202/240 (84%), Positives = 221/240 (92%) Query: 8 MPVTPHKAMVLAAGLGVRMRPLTNTMPKPLVSVAGQPLLDHVLDKLAGAGVSEAVVNVHY 67 M V P KAMVLAAG G+RMRPLT+ MPKP+V VAGQPLLDHVLDKL AGVSEAVVNVHY Sbjct: 1 MSVKPTKAMVLAAGFGLRMRPLTDKMPKPMVPVAGQPLLDHVLDKLGQAGVSEAVVNVHY 60 Query: 68 LPDQIIEHVKTRSRPRVIISDERDQVLGTGGAVVKALPLLGDAPFYHLNADTMWIDGVRS 127 LPDQII+HV +R PRV ISDER+QVLGTGG VVKALPLLG+APF+H+N+DT+WIDGVRS Sbjct: 61 LPDQIIDHVASRQHPRVTISDERNQVLGTGGGVVKALPLLGNAPFFHVNSDTLWIDGVRS 120 Query: 128 NLARLAETFDPARMDILLLMAPTASSIGYGGRGDYSMLPDGALRKRREHQVVPFVYAGAA 187 NLARLAE FDPARMDILLLMAPTA+SIGY GRGDY MLPDGALRKR+E +VVPFVYAGAA Sbjct: 121 NLARLAENFDPARMDILLLMAPTATSIGYSGRGDYGMLPDGALRKRKEKEVVPFVYAGAA 180 Query: 188 IMSPALFADAPAGEFSLTKMFDRANEQERLFGLRLDGVWMHVGTPDAIQAAEEAYLESVA 247 I+SP++FADAP GEFSLTKMFDRANEQERLFGLRLDGVWMHVGTPDA+ AAEEA+LESVA Sbjct: 181 ILSPSIFADAPQGEFSLTKMFDRANEQERLFGLRLDGVWMHVGTPDAVHAAEEAFLESVA 240 >ref|YP_575417.1| nucleotidyl transferase [Nitrobacter hamburgensis X14] gb|ABE60957.1| Nucleotidyl transferase [Nitrobacter hamburgensis X14] Length = 240 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 205/240 (85%), Positives = 222/240 (92%) Query: 8 MPVTPHKAMVLAAGLGVRMRPLTNTMPKPLVSVAGQPLLDHVLDKLAGAGVSEAVVNVHY 67 MPVTP KAMVLAAGLG+RMRPLT MPKP+V VAG+PLLDHVLD+LA AG+SEAVVNV Y Sbjct: 1 MPVTPTKAMVLAAGLGLRMRPLTERMPKPMVPVAGKPLLDHVLDRLADAGISEAVVNVRY 60 Query: 68 LPDQIIEHVKTRSRPRVIISDERDQVLGTGGAVVKALPLLGDAPFYHLNADTMWIDGVRS 127 LPDQII+HV RSRPRVIISDERD+VLGTGGAVVKALPLLGDAPF+HLNADTMWIDG R Sbjct: 61 LPDQIIDHVARRSRPRVIISDERDEVLGTGGAVVKALPLLGDAPFFHLNADTMWIDGARP 120 Query: 128 NLARLAETFDPARMDILLLMAPTASSIGYGGRGDYSMLPDGALRKRREHQVVPFVYAGAA 187 NL R+ E FDPARMDILLLMAPTASSIGYGG GDY+MLPDGALR+R+E+QVVPFVYAGAA Sbjct: 121 NLTRMTEAFDPARMDILLLMAPTASSIGYGGSGDYAMLPDGALRRRKENQVVPFVYAGAA 180 Query: 188 IMSPALFADAPAGEFSLTKMFDRANEQERLFGLRLDGVWMHVGTPDAIQAAEEAYLESVA 247 IMSPALFA AP+GEFSLT MFDRANE+ERLFGLRLDGVWMHVGTPDA+QAAE+A L SVA Sbjct: 181 IMSPALFAGAPSGEFSLTTMFDRANERERLFGLRLDGVWMHVGTPDAVQAAEQAVLVSVA 240 >ref|NP_945432.1| nucleotidyl transferase [Rhodopseudomonas palustris CGA009] emb|CAE25520.1| Nucleotidyl transferase [Rhodopseudomonas palustris CGA009] Length = 240 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 199/240 (82%), Positives = 217/240 (90%) Query: 8 MPVTPHKAMVLAAGLGVRMRPLTNTMPKPLVSVAGQPLLDHVLDKLAGAGVSEAVVNVHY 67 M V PHKAMVLAAGLG+RMRPLT+ MPKPLV VAG+PLLDHVLD+LA GV+EAVVNVHY Sbjct: 1 MTVRPHKAMVLAAGLGLRMRPLTDHMPKPLVRVAGRPLLDHVLDRLAEVGVTEAVVNVHY 60 Query: 68 LPDQIIEHVKTRSRPRVIISDERDQVLGTGGAVVKALPLLGDAPFYHLNADTMWIDGVRS 127 LPDQII+HV R+ PRVIISDERDQVLGTGGAVVKALPLLGDAPFYHLNADTMWIDGVR Sbjct: 61 LPDQIIDHVAGRTSPRVIISDERDQVLGTGGAVVKALPLLGDAPFYHLNADTMWIDGVRP 120 Query: 128 NLARLAETFDPARMDILLLMAPTASSIGYGGRGDYSMLPDGALRKRREHQVVPFVYAGAA 187 NLARLAE FDPARMDILLLMAPTA+SIGY G+GD++M PDG+L KR+E +VVPFVYAGAA Sbjct: 121 NLARLAEAFDPARMDILLLMAPTANSIGYAGKGDFAMSPDGSLHKRKETEVVPFVYAGAA 180 Query: 188 IMSPALFADAPAGEFSLTKMFDRANEQERLFGLRLDGVWMHVGTPDAIQAAEEAYLESVA 247 IMSPA+F DAP GEFSLTKMFDRA +Q RL GLRLDG+WMHVGTPDA+ AAE AYL SVA Sbjct: 181 IMSPAIFKDAPQGEFSLTKMFDRAGQQHRLHGLRLDGLWMHVGTPDAVPAAERAYLASVA 240 >ref|YP_004106455.1| nucleotidyl transferase [Rhodopseudomonas palustris DX-1] gb|ADU41722.1| Nucleotidyl transferase [Rhodopseudomonas palustris DX-1] Length = 240 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/240 (82%), Positives = 215/240 (89%) Query: 8 MPVTPHKAMVLAAGLGVRMRPLTNTMPKPLVSVAGQPLLDHVLDKLAGAGVSEAVVNVHY 67 M V PHKAMVLAAGLG+RMRPLT+ MPKPLV VAG+PLLDHVLD+LA GV+EAVVNVHY Sbjct: 1 MTVRPHKAMVLAAGLGLRMRPLTDHMPKPLVRVAGRPLLDHVLDRLAEVGVAEAVVNVHY 60 Query: 68 LPDQIIEHVKTRSRPRVIISDERDQVLGTGGAVVKALPLLGDAPFYHLNADTMWIDGVRS 127 LPDQII+HV R PRV+ISDERDQVLGTGGAVVKALPLLGDAPFYHLNADT+WIDGVR Sbjct: 61 LPDQIIDHVAGRQSPRVMISDERDQVLGTGGAVVKALPLLGDAPFYHLNADTVWIDGVRP 120 Query: 128 NLARLAETFDPARMDILLLMAPTASSIGYGGRGDYSMLPDGALRKRREHQVVPFVYAGAA 187 NLARLAE FDP RMDILLLMAPTA SIGY G+GD++M PDG L KR+E +VVPFVYAGAA Sbjct: 121 NLARLAEAFDPVRMDILLLMAPTAGSIGYAGKGDFAMSPDGTLHKRKETEVVPFVYAGAA 180 Query: 188 IMSPALFADAPAGEFSLTKMFDRANEQERLFGLRLDGVWMHVGTPDAIQAAEEAYLESVA 247 IMSPA+F DAP GEFSLT+MFDRA EQ+RLFGLRLDGVWMHVGTP+A+ AAE AYL SVA Sbjct: 181 IMSPAIFQDAPQGEFSLTRMFDRAAEQQRLFGLRLDGVWMHVGTPEAVTAAERAYLASVA 240 >ref|YP_001202303.1| putative nucleotidyl transferase family protein mannose-1-phosphate guanyltransferase [Bradyrhizobium sp. ORS 278] emb|CAL74053.1| Putative Nucleotidyl transferase family protein; putative Mannose-1-phosphate guanyltransferase [Bradyrhizobium sp. ORS 278] Length = 240 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 194/240 (80%), Positives = 215/240 (89%) Query: 8 MPVTPHKAMVLAAGLGVRMRPLTNTMPKPLVSVAGQPLLDHVLDKLAGAGVSEAVVNVHY 67 MPV PHKAMVLAAGLG+RMRPLT MPKPLV VAG+PLLDHVLD+LA AGV+EAVVNVHY Sbjct: 1 MPVHPHKAMVLAAGLGLRMRPLTEKMPKPLVRVAGRPLLDHVLDRLAEAGVTEAVVNVHY 60 Query: 68 LPDQIIEHVKTRSRPRVIISDERDQVLGTGGAVVKALPLLGDAPFYHLNADTMWIDGVRS 127 L DQIIEH TRS PRVIISDERDQVLGTGG VVKALPLLG PF+H+N+DTMWI+GVR Sbjct: 61 LADQIIEHTATRSAPRVIISDERDQVLGTGGGVVKALPLLGHEPFFHVNSDTMWIEGVRQ 120 Query: 128 NLARLAETFDPARMDILLLMAPTASSIGYGGRGDYSMLPDGALRKRREHQVVPFVYAGAA 187 NL+RLA+ FDPARMDI+LLMAPTA+SIGY G+GDY+ML DG LRKRREHQVVPFVYAGAA Sbjct: 121 NLSRLADAFDPARMDIMLLMAPTATSIGYAGQGDYAMLADGTLRKRREHQVVPFVYAGAA 180 Query: 188 IMSPALFADAPAGEFSLTKMFDRANEQERLFGLRLDGVWMHVGTPDAIQAAEEAYLESVA 247 I+SPA+F AP GEFSLTKMFD+ANEQ+RL+GLRL+GVWMHVGTP A+ AEEA LES A Sbjct: 181 IISPAIFDGAPEGEFSLTKMFDKANEQDRLYGLRLEGVWMHVGTPAAVTEAEEALLESAA 240