BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0154.0002.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002541089.1| hypothetical protein Arad_8155 [Agrobacteriu... 501 e-140 ref|YP_001757034.1| hypothetical protein Mrad2831_4385 [Methylob... 446 e-123 ref|ZP_06898673.1| conserved hypothetical protein [Roseomonas ce... 422 e-116 ref|YP_002549141.1| hypothetical protein Avi_1585 [Agrobacterium... 392 e-107 ref|YP_001767700.1| hypothetical protein M446_0706 [Methylobacte... 390 e-106 >ref|YP_002541089.1| hypothetical protein Arad_8155 [Agrobacterium radiobacter K84] gb|ACM29492.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 337 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 245/340 (72%), Positives = 279/340 (82%), Gaps = 4/340 (1%) Query: 1 MSATILTEDLAVRFARIALGHVTREYPSKPDHVLAGPQDARTPRELHPVFFGSYDWHSCV 60 M+ +ILT +LA +FA IALGHV REYP+ DH LAGPQDARTPR+LHP+F+GSYDWHSCV Sbjct: 1 MTLSILTPELAEQFAGIALGHVRREYPNNLDHALAGPQDARTPRDLHPIFYGSYDWHSCV 60 Query: 61 HSYWMLARLLRRYPSSEAADDIRALFDAQVVAEKIAAECSYLAAPTARGFKRPYGWGWLL 120 HSYW+LARLLRR+P A +R LFD Q AEK+AAE +Y AAPTARGFKRPYGW WLL Sbjct: 61 HSYWLLARLLRRFPELSFAARVRGLFDEQFTAEKVAAEYAYFAAPTARGFKRPYGWAWLL 120 Query: 121 KLAAELSLLENTNWRDRIAPLAGIFAQRYRDFLPLATYPVRVGTHFNTAFGLRMAADYAA 180 KLA EL+LL++ W +APLA + AQR+RDFLPL+TYP+RVGTHFNTAFGLRMAADYAA Sbjct: 121 KLATELALLDDPRWSRALAPLAEVIAQRFRDFLPLSTYPIRVGTHFNTAFGLRMAADYAA 180 Query: 181 VIQDDALSALLRDTALRWYGADQDCPAWGEPSGDDFQSSALIEAECMRRLLAPGDFLPWF 240 V QD AL+ LL DTA RWYGAD DCPAWGEPSGD+FQSSAL+EAECMRRLL DFLPWF Sbjct: 181 VTQDAALTGLLLDTARRWYGADADCPAWGEPSGDEFQSSALVEAECMRRLLPGEDFLPWF 240 Query: 241 DRFLPRLELREPATLFRPATVTDRSDGKLAHLDGLNLSRAWCWRGGGGRWPARLRRQLPC 300 DRFLP + EP+TLFRPATVTDR+DGK+AHLDGLNLSRAWCWR P+ PC Sbjct: 241 DRFLPGITQYEPSTLFRPATVTDRTDGKIAHLDGLNLSRAWCWRSLAAALPS----DDPC 296 Query: 301 RPILQDAARRHLDAGLPHIASDYMGEHWLASFAVLAIDAE 340 R I+ +AA HL GLPHIASDYMGEHWLA+FAVLA++ E Sbjct: 297 RAIMLEAADHHLATGLPHIASDYMGEHWLATFAVLALENE 336 >ref|YP_001757034.1| hypothetical protein Mrad2831_4385 [Methylobacterium radiotolerans JCM 2831] gb|ACB26351.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM 2831] Length = 354 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 231/334 (69%), Positives = 256/334 (76%), Gaps = 4/334 (1%) Query: 6 LTEDLAVRFARIALGHVTREYPSKPDHVLAGPQDARTPRELHPVFFGSYDWHSCVHSYWM 65 LT DLA RFA +ALGHV REYP+KP HVLAGP DARTP LHP F GSYDWHSCVH W+ Sbjct: 13 LTPDLAARFAAVALGHVGREYPNKPGHVLAGPADARTPAALHPAFHGSYDWHSCVHGTWL 72 Query: 66 LARLLRRYPSSEAADDIRALFDAQVVAEKIAAECSYLAAPTARGFKRPYGWGWLLKLAAE 125 LAR+LR +P A IRA FDAQ+ +A EC+Y AAPTARGF+RPYGWGWLLKLA E Sbjct: 73 LARVLRLFPDGPQAAAIRARFDAQLTPGTVAGECAYFAAPTARGFERPYGWGWLLKLADE 132 Query: 126 LSLLENTNWRDRIAPLAGIFAQRYRDFLPLATYPVRVGTHFNTAFGLRMAADYAAVIQDD 185 LS L W + +APLAG+ R+ +FLP+ATYPVRVGTHFNTAF LR+AADYA D Sbjct: 133 LSALPERRWSEALAPLAGLIVGRFAEFLPVATYPVRVGTHFNTAFALRLAADYAEGAGDA 192 Query: 186 ALSALLRDTALRWYGADQDCPAWGEPSGDDFQSSALIEAECMRRLLAPGDFLPWFDRFLP 245 AL ALLRDTA+RWYG D DCPAWGEPSGDDF SSALIEAECMRRLL P F PWFDRFLP Sbjct: 193 ALIALLRDTAVRWYGDDADCPAWGEPSGDDFLSSALIEAECMRRLLPPARFAPWFDRFLP 252 Query: 246 RLELREPATLFRPATVTDRSDGKLAHLDGLNLSRAWCWRGGGGRWPARLRRQLPCRPILQ 305 L PATLFRPA VTDRSDGK+AHLDGLNLSRAWC+R A L P RP L+ Sbjct: 253 GLAASRPATLFRPARVTDRSDGKIAHLDGLNLSRAWCFRA----LAASLGPDDPRRPPLR 308 Query: 306 DAARRHLDAGLPHIASDYMGEHWLASFAVLAIDA 339 AA HL AGLPH+ DYMGEHWLA+FA+LA++A Sbjct: 309 AAAEAHLAAGLPHVTGDYMGEHWLATFALLALEA 342 >ref|ZP_06898673.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gb|EFH09618.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 312 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 211/335 (62%), Positives = 246/335 (73%), Gaps = 23/335 (6%) Query: 5 ILTEDLAVRFARIALGHVTREYPSKPDHVLAGPQDARTPRELHPVFFGSYDWHSCVHSYW 64 +LTEDLA RFARIALGHV REYP+K H + GP+D TP +L+P+F GSYDWHSCVH YW Sbjct: 1 MLTEDLASRFARIALGHVEREYPTKIAHAMTGPEDVGTPSQLYPIFHGSYDWHSCVHGYW 60 Query: 65 MLARLLRRYPSSEAADDIRALFDAQVVAEKIAAECSYLAAPTARGFKRPYGWGWLLKLAA 124 +LA LL+R+P+ E+A DIRALF ++ + IA EC+YL+ P++RGF+RPYGW W LKL A Sbjct: 61 LLAHLLQRFPAMESAADIRALFARKLTPDNIAGECAYLSRPSSRGFERPYGWAWALKLCA 120 Query: 125 ELSLLENTNWRDRIAPLAGIFAQRYRDFLPLATYPVRVGTHFNTAFGLRMAADYAAVIQD 184 L T W APL + Q++RDFLP ATYPVRVGTHFNTAF LR+AADYA D Sbjct: 121 T---LRGTEWEAATAPLGALVEQKFRDFLPKATYPVRVGTHFNTAFALRLAADYA----D 173 Query: 185 DALSALLRDTALRWYGADQDCPAWGEPSGDDFQSSALIEAECMRRLLAPGDFLPWFDRFL 244 LLRDTA RWYG D+D PAWGEPSGDDF SS LIEAE MRRLL P +F PW FL Sbjct: 174 ADFLGLLRDTARRWYGEDRDAPAWGEPSGDDFLSSTLIEAEAMRRLLPPEEFAPWCRAFL 233 Query: 245 PRLELREPATLFRPATVTDRSDGKLAHLDGLNLSRAWCWRGGGGRWPARLRRQLPCRPIL 304 PRL +EPA LF PATV+DRSDGK+AHLDGLNLSRAWCWR G + Sbjct: 234 PRLAQQEPAALFTPATVSDRSDGKIAHLDGLNLSRAWCWRNLGQK--------------- 278 Query: 305 QDAARRHLDAGLPHIASDYMGEHWLASFAVLAIDA 339 A+RHL+AGLPH+A DYMGEHWLASFAVLA++ Sbjct: 279 -KVAQRHLEAGLPHVAGDYMGEHWLASFAVLALEG 312 >ref|YP_002549141.1| hypothetical protein Avi_1585 [Agrobacterium vitis S4] gb|ACM36135.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 339 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 202/337 (59%), Positives = 230/337 (68%), Gaps = 4/337 (1%) Query: 1 MSATILTEDLAVRFARIALGHVTREYPSKPDHVLAGPQDARTPRELHPVFFGSYDWHSCV 60 M IL A FA IALGHVTREYP+ HV G + TP LHPVF+GS+DWHSCV Sbjct: 3 MPQRILDIATAHGFAEIALGHVTREYPNHIMHVFDGAETEVTPSALHPVFYGSFDWHSCV 62 Query: 61 HSYWMLARLLRRYPSSEAADDIRALFDAQVVAEKIAAECSYLAAPTARGFKRPYGWGWLL 120 H YWMLARLLR +PS +A IR LFD +VAE IA EC Y P++RG++RPYGWGWLL Sbjct: 63 HGYWMLARLLRLFPSMPSAPAIRDLFDTMLVAENIAGECRYFDRPSSRGYERPYGWGWLL 122 Query: 121 KLAAELSLLENTNWRDRIAPLAGIFAQRYRDFLPLATYPVRVGTHFNTAFGLRMAADYAA 180 LAAE E +W + PL R+ FLPLATYPVRVGTH+NTAF LR+AADY Sbjct: 123 ALAAEFEGHEKPDWARALLPLTQRIVARFEAFLPLATYPVRVGTHYNTAFALRLAADYGH 182 Query: 181 VIQDDALSALLRDTALRWYGADQDCPAWGEPSGDDFQSSALIEAECMRRLLAPGDFLPWF 240 V + A LL TA RWYG D C AWGEPSGD+F SS+LIEAECMRRLL G+F W Sbjct: 183 VSGNSAFLTLLEQTARRWYGDDHTCTAWGEPSGDEFLSSSLIEAECMRRLLPRGEFSGWL 242 Query: 241 DRFLPRLELREPATLFRPATVTDRSDGKLAHLDGLNLSRAWCWRGGGGRWPARLRRQLPC 300 RFLP L EPA L +PA V+DRSDGK+AHLDGLNLSRAWC+ A L+ Q Sbjct: 243 SRFLPDLARGEPAHLMQPANVSDRSDGKIAHLDGLNLSRAWCFYA----LAAALKDQDAA 298 Query: 301 RPILQDAARRHLDAGLPHIASDYMGEHWLASFAVLAI 337 L AA RHLDA L H+A +YMGEHWLASFAVLA+ Sbjct: 299 SLALTQAAERHLDAALAHVAGEYMGEHWLASFAVLAL 335 >ref|YP_001767700.1| hypothetical protein M446_0706 [Methylobacterium sp. 4-46] gb|ACA15266.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 334 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/336 (61%), Positives = 237/336 (70%), Gaps = 4/336 (1%) Query: 4 TILTEDLAVRFARIALGHVTREYPSKPDHVLAGPQDARTPRELHPVFFGSYDWHSCVHSY 63 T LT D A RFA + LGHVTREYP P VL GPQDAR P LHP+F GS+DWHSCVH Y Sbjct: 3 TGLTPDRASRFAALTLGHVTREYPYLPGLVLTGPQDARPPAALHPIFHGSFDWHSCVHGY 62 Query: 64 WMLARLLRRYPSSEAADDIRALFDAQVVAEKIAAECSYLAAPTARGFKRPYGWGWLLKLA 123 W+LARLL R P++ A+ +R LFD +V K+A EC+ L+AP A F+RPYGW WLLKLA Sbjct: 63 WLLARLLAREPAAPWAESVRTLFDHSLVPAKVAGECATLSAPAAARFERPYGWAWLLKLA 122 Query: 124 AELSLLENTNWRDRIAPLAGIFAQRYRDFLPLATYPVRVGTHFNTAFGLRMAADYAAVIQ 183 L+ L W + +APL + A R R+ LP++ YPVRVGTHFNTAF LR+AADYA Sbjct: 123 EALARLPEPRWAEALAPLTALIAARIREILPVSPYPVRVGTHFNTAFALRLAADYAEGAG 182 Query: 184 DDALSALLRDTALRWYGADQDCPAWGEPSGDDFQSSALIEAECMRRLLAPGDFLPWFDRF 243 D AL+ L A WYGAD CPAWGEPSGDDF SSALIEAECMRRLL P FLPWF RF Sbjct: 183 DSALTGRLLAMAWAWYGADAACPAWGEPSGDDFLSSALIEAECMRRLLPPERFLPWFARF 242 Query: 244 LPRLELREPATLFRPATVTDRSDGKLAHLDGLNLSRAWCWRGGGGRWPARLRRQLPCRPI 303 LP L +P TLFRPATV DR DGK+AHLDGLNLSRAWC R P + P P Sbjct: 243 LPDLAAGQPETLFRPATVADRGDGKIAHLDGLNLSRAWCLRALARALP----QDDPRVPP 298 Query: 304 LQDAARRHLDAGLPHIASDYMGEHWLASFAVLAIDA 339 ++ AA HL A LPH+A YMG HWLASFAVLA++A Sbjct: 299 MRAAAEAHLAASLPHLADHYMGAHWLASFAVLALEA 334