BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0022.p (397 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767445.1| hypothetical protein bll0805 [Bradyrhizobium ja... 701 0.0 ref|YP_004106538.1| beta-lactamase [Rhodopseudomonas palustris D... 618 e-175 ref|YP_001989499.1| beta-lactamase [Rhodopseudomonas palustris T... 615 e-174 ref|NP_945813.1| beta-lactamase [Rhodopseudomonas palustris CGA0... 615 e-174 ref|YP_567394.1| beta-lactamase [Rhodopseudomonas palustris BisB... 613 e-173 >ref|NP_767445.1| hypothetical protein bll0805 [Bradyrhizobium japonicum USDA 110] dbj|BAC46070.1| bll0805 [Bradyrhizobium japonicum USDA 110] Length = 449 Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/397 (84%), Positives = 364/397 (91%) Query: 1 MQSKAQIDQVLRQKSEAKEIPGVVAIAATGKDVIYEGAFGKRDLSKSDPMTADSVFWIAS 60 MQS+AQID+VLR+ S+AKEIPGVVAIAA+G DV+Y+GAFGKRDLSK D MTADSVFWIAS Sbjct: 53 MQSQAQIDEVLRKTSDAKEIPGVVAIAASGNDVLYQGAFGKRDLSKPDAMTADSVFWIAS 112 Query: 61 MTKAVTSAGAMQLVEQGKLSLDEPIGKLLPDLAAVQVLDGFDAKGEPQLRPAKKPITLRQ 120 MTKAVT+AGAMQLVEQGKLSLD PIG++LPDLA QVL+GFDAKGEP+LRPAK PITLRQ Sbjct: 113 MTKAVTTAGAMQLVEQGKLSLDAPIGEVLPDLAKPQVLEGFDAKGEPKLRPAKGPITLRQ 172 Query: 121 LMTHTAGFAYDMWDGNLGKYLEKTGTPGIITCLNAALKTPIMTDPGTRWEYGTNIDFVGK 180 LMTHTAGF YDMW+GN+G YLEKTGTPGIITC NAALKTPI +DPGTRWEYGTNIDFVGK Sbjct: 173 LMTHTAGFCYDMWNGNMGIYLEKTGTPGIITCQNAALKTPIASDPGTRWEYGTNIDFVGK 232 Query: 181 AVEAASGKKLDAYLRDNMLAPLGMSDTAFKISDDMRKRLVGMHARGEDGTLAAIPFELEQ 240 AVEA SGK+LDAYLRD++ PLGMSDT FKI+DDMRKRLVGMHARGEDG L AIPFELEQ Sbjct: 233 AVEAVSGKRLDAYLRDSLFTPLGMSDTGFKITDDMRKRLVGMHARGEDGQLGAIPFELEQ 292 Query: 241 NPEFHMGGGGLYSTAADYIKFCQMILNKGKGNGNQVLKAETVATMGQNHIGELTVGKMTT 300 PEF MGGGGLYSTAADYI+F QMILNKG+GNGNQVLKAETVATMGQNHIG+L V KMT+ Sbjct: 293 APEFCMGGGGLYSTAADYIRFTQMILNKGRGNGNQVLKAETVATMGQNHIGDLNVTKMTS 352 Query: 301 ALPMYTNDVDLYPEIVKKWGLSFLINTAKTPEGRSAGSLAWAGLANTYYWIDPSRDVCGV 360 PMYTNDVDLYP+ VKKWGLSFLINTAKTPEGRS SLAWAGLANTYYWIDP+RDV GV Sbjct: 353 VAPMYTNDVDLYPDQVKKWGLSFLINTAKTPEGRSPNSLAWAGLANTYYWIDPARDVTGV 412 Query: 361 ILTQLLPFADKHSLEAFAGFEKGIYAGLDAGSGQRAA 397 IL Q+LPFAD LEAFAGFE+G+YAGLDAGSGQ+AA Sbjct: 413 ILMQVLPFADGKCLEAFAGFERGVYAGLDAGSGQKAA 449 >ref|YP_004106538.1| beta-lactamase [Rhodopseudomonas palustris DX-1] gb|ADU41805.1| beta-lactamase [Rhodopseudomonas palustris DX-1] Length = 395 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 294/397 (74%), Positives = 333/397 (83%), Gaps = 2/397 (0%) Query: 1 MQSKAQIDQVLRQKSEAKEIPGVVAIAATGKDVIYEGAFGKRDLSKSDPMTADSVFWIAS 60 MQS +QIDQ LRQ SE IPGVVAIA +DV+Y+GAFGKRDLSK MT DSVFWIAS Sbjct: 1 MQSSSQIDQSLRQMSENGAIPGVVAIAGNAQDVLYQGAFGKRDLSKPPAMTTDSVFWIAS 60 Query: 61 MTKAVTSAGAMQLVEQGKLSLDEPIGKLLPDLAAVQVLDGFDAKGEPQLRPAKKPITLRQ 120 MTKA+T+A AMQLVEQGKLSLDEPIGK+LPDLA VLDGFDA G P+ RPAK PITLRQ Sbjct: 61 MTKAITAAAAMQLVEQGKLSLDEPIGKVLPDLAEPLVLDGFDADGTPKTRPAKSPITLRQ 120 Query: 121 LMTHTAGFAYDMWDGNLGKYLEKTGTPGIITCLNAALKTPIMTDPGTRWEYGTNIDFVGK 180 L+THTAGF YDMW+ ++ KY+E+ G PGII C AALKTP+ +DPGTRWEYG NIDF GK Sbjct: 121 LLTHTAGFCYDMWNADMVKYMERHGIPGIIGCQEAALKTPLASDPGTRWEYGINIDFAGK 180 Query: 181 AVEAASGKKLDAYLRDNMLAPLGMSDTAFKISDDMRKRLVGMHARGEDGTLAAIPFELEQ 240 AVEAASG KLDAYLRD++ APLGM+D FKI+D+ R RLV +HARGEDG+L+ IPFE+ Q Sbjct: 181 AVEAASGMKLDAYLRDHLFAPLGMTDMGFKITDEQRNRLVAVHARGEDGSLSPIPFEVAQ 240 Query: 241 NPEFHMGGGGLYSTAADYIKFCQMILNKGKGNGNQVLKAETVATMGQNHIGELTVGKMTT 300 PEFHMGGGGLY TAADY+KF QMILNKG+GNGNQVLK ETVA MGQNHIG+L V ++ + Sbjct: 241 EPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPETVALMGQNHIGDLNVTRLNS 300 Query: 301 ALPMYTNDVDLYPEIVKKWGLSFLINTAKTPEGRSAGSLAWAGLANTYYWIDPSRDVCGV 360 A+P TNDVDLYP + KKWGLSFLINT TPEGRS GSLAWAGLANTYYWIDP+RDVCGV Sbjct: 301 AIPFATNDVDLYPGMDKKWGLSFLINTEATPEGRSPGSLAWAGLANTYYWIDPARDVCGV 360 Query: 361 ILTQLLPFADKHSLEAFAGFEKGIYAGLDAGSGQRAA 397 IL Q+LPFAD LEAF FE+G+YAGL G+GQ+AA Sbjct: 361 ILMQVLPFADAKCLEAFGAFERGVYAGL--GAGQQAA 395 >ref|YP_001989499.1| beta-lactamase [Rhodopseudomonas palustris TIE-1] gb|ACE99023.1| beta-lactamase [Rhodopseudomonas palustris TIE-1] Length = 395 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 290/385 (75%), Positives = 326/385 (84%) Query: 1 MQSKAQIDQVLRQKSEAKEIPGVVAIAATGKDVIYEGAFGKRDLSKSDPMTADSVFWIAS 60 MQS QIDQ LRQ SE +IPGVVAIA K+V+Y+GAFGKRDLSK + MT DSVFWIAS Sbjct: 1 MQSSNQIDQSLRQMSERGDIPGVVAIAGNSKEVLYQGAFGKRDLSKPEQMTTDSVFWIAS 60 Query: 61 MTKAVTSAGAMQLVEQGKLSLDEPIGKLLPDLAAVQVLDGFDAKGEPQLRPAKKPITLRQ 120 MTKA+T+A AMQLVEQGKLSLDEPIGK+LPDLA VLDGFDA G P+ RPAK PITLRQ Sbjct: 61 MTKAITAAAAMQLVEQGKLSLDEPIGKVLPDLAEPLVLDGFDADGTPKTRPAKSPITLRQ 120 Query: 121 LMTHTAGFAYDMWDGNLGKYLEKTGTPGIITCLNAALKTPIMTDPGTRWEYGTNIDFVGK 180 L+THTAGF YDMW+ ++ KY+E+ G PGII C AALKTP+ +DPGTRWEYG NIDF GK Sbjct: 121 LLTHTAGFCYDMWNADMVKYMERHGIPGIIGCQEAALKTPLASDPGTRWEYGINIDFAGK 180 Query: 181 AVEAASGKKLDAYLRDNMLAPLGMSDTAFKISDDMRKRLVGMHARGEDGTLAAIPFELEQ 240 AVEAASG KLDAYLRD++ APLGM+D FKI D+ RKRLV +HARGEDG+L+ IPFE+ Q Sbjct: 181 AVEAASGMKLDAYLRDHLFAPLGMTDMGFKIKDEQRKRLVAVHARGEDGSLSPIPFEVAQ 240 Query: 241 NPEFHMGGGGLYSTAADYIKFCQMILNKGKGNGNQVLKAETVATMGQNHIGELTVGKMTT 300 PEFHMGGGGLY TAADY+KF QMILNKG+GNGNQVLK ETVA MGQNHIG+L V K+ + Sbjct: 241 EPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPETVAMMGQNHIGDLNVTKLNS 300 Query: 301 ALPMYTNDVDLYPEIVKKWGLSFLINTAKTPEGRSAGSLAWAGLANTYYWIDPSRDVCGV 360 A+ TNDVDLYP + KKWGLSFLINT KTPEGRSAGSLAWAGLANTYYWIDP+RDVCGV Sbjct: 301 AIAFATNDVDLYPGMTKKWGLSFLINTEKTPEGRSAGSLAWAGLANTYYWIDPTRDVCGV 360 Query: 361 ILTQLLPFADKHSLEAFAGFEKGIY 385 IL Q+LPFAD LEAFA FE+G+Y Sbjct: 361 ILMQVLPFADAKCLEAFAAFERGVY 385 >ref|NP_945813.1| beta-lactamase [Rhodopseudomonas palustris CGA009] emb|CAE25904.1| putative esterase [Rhodopseudomonas palustris CGA009] Length = 395 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 290/385 (75%), Positives = 325/385 (84%) Query: 1 MQSKAQIDQVLRQKSEAKEIPGVVAIAATGKDVIYEGAFGKRDLSKSDPMTADSVFWIAS 60 MQS QIDQ LRQ SE +IPGVVAIA K+V+Y+GAFGKRDLSK + MT DSVFWIAS Sbjct: 1 MQSSNQIDQSLRQMSERGDIPGVVAIAGNSKEVLYQGAFGKRDLSKPEQMTTDSVFWIAS 60 Query: 61 MTKAVTSAGAMQLVEQGKLSLDEPIGKLLPDLAAVQVLDGFDAKGEPQLRPAKKPITLRQ 120 MTKA+T+A AMQLVEQGKLSLDEPIGK+LPDLA VLDGFDA G P+ RPAK PITLRQ Sbjct: 61 MTKAITAAAAMQLVEQGKLSLDEPIGKVLPDLAEPLVLDGFDADGTPKTRPAKSPITLRQ 120 Query: 121 LMTHTAGFAYDMWDGNLGKYLEKTGTPGIITCLNAALKTPIMTDPGTRWEYGTNIDFVGK 180 L+THTAGF YDMW ++ KY+E+ G PGII C AALKTP+ +DPGTRWEYG NIDF GK Sbjct: 121 LLTHTAGFCYDMWSADMVKYMERHGIPGIIGCQEAALKTPLASDPGTRWEYGINIDFAGK 180 Query: 181 AVEAASGKKLDAYLRDNMLAPLGMSDTAFKISDDMRKRLVGMHARGEDGTLAAIPFELEQ 240 AVEAASG KLDAYLRD++ APLGM+D FKI D+ RKRLV +HARGEDG+L+ IPFE+ Q Sbjct: 181 AVEAASGMKLDAYLRDHLFAPLGMTDMGFKIKDEQRKRLVAVHARGEDGSLSPIPFEVAQ 240 Query: 241 NPEFHMGGGGLYSTAADYIKFCQMILNKGKGNGNQVLKAETVATMGQNHIGELTVGKMTT 300 PEFHMGGGGLY TAADY+KF QMILNKG+GNGNQVLK ETVA MGQNHIG+L V K+ + Sbjct: 241 EPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPETVAMMGQNHIGDLNVTKLNS 300 Query: 301 ALPMYTNDVDLYPEIVKKWGLSFLINTAKTPEGRSAGSLAWAGLANTYYWIDPSRDVCGV 360 A+ TNDVDLYP + KKWGLSFLINT KTPEGRSAGSLAWAGLANTYYWIDP+RDVCGV Sbjct: 301 AIAFATNDVDLYPGMTKKWGLSFLINTEKTPEGRSAGSLAWAGLANTYYWIDPTRDVCGV 360 Query: 361 ILTQLLPFADKHSLEAFAGFEKGIY 385 IL Q+LPFAD LEAFA FE+G+Y Sbjct: 361 ILMQVLPFADAKCLEAFAAFERGVY 385 >ref|YP_567394.1| beta-lactamase [Rhodopseudomonas palustris BisB5] gb|ABE37493.1| beta-lactamase [Rhodopseudomonas palustris BisB5] Length = 395 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 287/391 (73%), Positives = 331/391 (84%) Query: 1 MQSKAQIDQVLRQKSEAKEIPGVVAIAATGKDVIYEGAFGKRDLSKSDPMTADSVFWIAS 60 MQS+A IDQ+L+Q E +IPGVVA+A + +V+YEGAFGKRDLSK PMT DSVFWIAS Sbjct: 1 MQSRANIDQLLQQSCERGDIPGVVAVAGSSTEVLYEGAFGKRDLSKPQPMTTDSVFWIAS 60 Query: 61 MTKAVTSAGAMQLVEQGKLSLDEPIGKLLPDLAAVQVLDGFDAKGEPQLRPAKKPITLRQ 120 MTKA+TSA AMQLVEQGKLSLDEPIGK+LPDLA VLDGFDA G P RPA PITLRQ Sbjct: 61 MTKAITSAAAMQLVEQGKLSLDEPIGKVLPDLAEPLVLDGFDASGNPITRPANAPITLRQ 120 Query: 121 LMTHTAGFAYDMWDGNLGKYLEKTGTPGIITCLNAALKTPIMTDPGTRWEYGTNIDFVGK 180 L+THTAGF YDMW+G++ KY+E+ PG++ C AALK PIM+DPG RWEYG +IDFVG+ Sbjct: 121 LLTHTAGFCYDMWNGDMVKYMERYDIPGVLRCREAALKVPIMSDPGARWEYGISIDFVGR 180 Query: 181 AVEAASGKKLDAYLRDNMLAPLGMSDTAFKISDDMRKRLVGMHARGEDGTLAAIPFELEQ 240 VEAASG++LDAYLRD++LAPLGMSDT F+I+D R+RLV +H+RG DGTLA I FE+EQ Sbjct: 181 VVEAASGERLDAYLRDDILAPLGMSDTGFRITDAQRERLVAVHSRGADGTLAPIEFEVEQ 240 Query: 241 NPEFHMGGGGLYSTAADYIKFCQMILNKGKGNGNQVLKAETVATMGQNHIGELTVGKMTT 300 PEF MGGGGLY TAADY+KF +MILNKG+GNGNQVLK ETVA MGQNHIG+L V ++ + Sbjct: 241 EPEFIMGGGGLYGTAADYLKFTRMILNKGRGNGNQVLKPETVALMGQNHIGDLNVTRLNS 300 Query: 301 ALPMYTNDVDLYPEIVKKWGLSFLINTAKTPEGRSAGSLAWAGLANTYYWIDPSRDVCGV 360 +P TNDVDLYP + KWGLSFLINTA TPEGRSAGSLAWAGLANTYYWIDP+RDVCGV Sbjct: 301 VIPFATNDVDLYPGMDNKWGLSFLINTATTPEGRSAGSLAWAGLANTYYWIDPTRDVCGV 360 Query: 361 ILTQLLPFADKHSLEAFAGFEKGIYAGLDAG 391 IL Q+LPFAD LEAFAGFE+G+YAGLDAG Sbjct: 361 ILMQVLPFADGKCLEAFAGFERGVYAGLDAG 391