BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0004.p (456 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767456.1| hypothetical protein bll0816 [Bradyrhizobium ja... 827 0.0 ref|YP_001236227.1| hypothetical protein BBta_0016 [Bradyrhizobi... 786 0.0 ref|YP_001202234.1| putative MmgE/PrpD family protein [Bradyrhiz... 785 0.0 ref|YP_567287.1| MmgE/PrpD [Rhodopseudomonas palustris BisB5] >g... 767 0.0 ref|NP_945915.1| MmgE/PrpD family protein [Rhodopseudomonas palu... 766 0.0 >ref|NP_767456.1| hypothetical protein bll0816 [Bradyrhizobium japonicum USDA 110] dbj|BAC46081.1| bll0816 [Bradyrhizobium japonicum USDA 110] Length = 456 Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/456 (89%), Positives = 436/456 (95%) Query: 1 MAHETATLAAYVADLKYSDIPPEVLERAKVLTLDFLGSAIRARRDAESTPSLMKMLEALA 60 MAHETATLAAYV +LKY DIP EVL+RAKVLTLDFLGSAIRAR +AESTPS++KMLEALA Sbjct: 1 MAHETATLAAYVFNLKYRDIPAEVLDRAKVLTLDFLGSAIRARSEAESTPSILKMLEALA 60 Query: 61 LDGKGEATVFGDTKTWTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV 120 LD +GE+TVFGD+KTWTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV Sbjct: 61 LDTRGESTVFGDSKTWTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV 120 Query: 121 GASGRDVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGAXAAAAKLFGLSKDQ 180 GASGRDVLTAIVAGYE+CCRLGNALDPTSHYARGFHPTATAGTYGA AAA KLFGLS+ Q Sbjct: 121 GASGRDVLTAIVAGYEICCRLGNALDPTSHYARGFHPTATAGTYGAAAAAGKLFGLSEKQ 180 Query: 181 IISAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLARNDFIGSSEAVEGKHG 240 II+AFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLARNDF+G++E+VEGKHG Sbjct: 181 IIAAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLARNDFVGATESVEGKHG 240 Query: 241 LLVGYSDDAHPDKAVAGLGSTYETLKIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQIR 300 LL GY+DDAHP KAVA LG TYET+KIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQ++ Sbjct: 241 LLAGYTDDAHPGKAVAELGKTYETMKIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQVK 300 Query: 301 KVEIGLHRNGITLTGDAATKRHPTSVVGGQFSMFFTGAIALDQGHFGWDDYDRLGDAAID 360 +VEIGLHRNGITLTGDAATKRHPTS+VGGQFSMFFTGA+ALDQG FGWDDY+RLGD AID Sbjct: 301 RVEIGLHRNGITLTGDAATKRHPTSIVGGQFSMFFTGALALDQGSFGWDDYNRLGDTAID 360 Query: 361 ALADKFDVVQDDRLEIGRTHPFGARVSITTDDGTHERLYADPSGEPTSFPDAMAMQQKFL 420 ALADKFDVVQDDRLEIGRTHPFGARVSITTDDG HERLYADPSGEP SFPDA AMQQKFL Sbjct: 361 ALADKFDVVQDDRLEIGRTHPFGARVSITTDDGVHERLYADPSGEPNSFPDAQAMQQKFL 420 Query: 421 TLARPVLDKRADQLADAILTLERFDRVEKATQLGRQ 456 TLARPVL+ RA++ ADAILTLERFDRV KAT+LGRQ Sbjct: 421 TLARPVLNARAEKFADAILTLERFDRVAKATELGRQ 456 >ref|YP_001236227.1| hypothetical protein BBta_0016 [Bradyrhizobium sp. BTAi1] gb|ABQ32321.1| hypothetical protein BBta_0016 [Bradyrhizobium sp. BTAi1] Length = 456 Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/455 (85%), Positives = 423/455 (92%) Query: 1 MAHETATLAAYVADLKYSDIPPEVLERAKVLTLDFLGSAIRARRDAESTPSLMKMLEALA 60 MA ETATLAAYVADLKY DIPPEVL+RAKVLTLDFLGSAIRARR+AESTPS++KML AL Sbjct: 1 MAQETATLAAYVADLKYDDIPPEVLDRAKVLTLDFLGSAIRARREAESTPSVVKMLAALK 60 Query: 61 LDGKGEATVFGDTKTWTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV 120 LD GEATVFGD++TWTPAVAALLNG +GHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV Sbjct: 61 LDSAGEATVFGDSRTWTPAVAALLNGTMGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV 120 Query: 121 GASGRDVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGAXAAAAKLFGLSKDQ 180 GASGR+VLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGA AAA KLFGLS+ Q Sbjct: 121 GASGREVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGAAAAAGKLFGLSEQQ 180 Query: 181 IISAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLARNDFIGSSEAVEGKHG 240 +I AFGVSGSQAAGSLQFLVNGAWNKRYQVGA+AMNGVIAATLA+NDF+G+ E+VEGKHG Sbjct: 181 LIYAFGVSGSQAAGSLQFLVNGAWNKRYQVGASAMNGVIAATLAKNDFVGAIESVEGKHG 240 Query: 241 LLVGYSDDAHPDKAVAGLGSTYETLKIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQIR 300 LLVGY+D H +KAVAGLG+TYET+KIGVKPYPSCRYTHAAIDA+IA+RREHNLTPDQ++ Sbjct: 241 LLVGYTDTPHREKAVAGLGTTYETMKIGVKPYPSCRYTHAAIDAIIALRREHNLTPDQVK 300 Query: 301 KVEIGLHRNGITLTGDAATKRHPTSVVGGQFSMFFTGAIALDQGHFGWDDYDRLGDAAID 360 +VEIGLHRNGITLTGDAATKRHPTS+VGGQFSMFFTGA+ALDQG FGWDDY RLGDAAI+ Sbjct: 301 RVEIGLHRNGITLTGDAATKRHPTSIVGGQFSMFFTGALALDQGRFGWDDYTRLGDAAIN 360 Query: 361 ALADKFDVVQDDRLEIGRTHPFGARVSITTDDGTHERLYADPSGEPTSFPDAMAMQQKFL 420 LA+KFDVVQDD+LEIGR+HPFGARV+ITT+DG HERL+ DPSGEPTSFP A AM KF+ Sbjct: 361 NLANKFDVVQDDKLEIGRSHPFGARVTITTEDGVHERLHDDPSGEPTSFPSAQAMSDKFI 420 Query: 421 TLARPVLDKRADQLADAILTLERFDRVEKATQLGR 455 TLARPVL RA ADAIL LERFDRV +AT LGR Sbjct: 421 TLARPVLSSRAQHFADAILGLERFDRVAQATALGR 455 >ref|YP_001202234.1| putative MmgE/PrpD family protein [Bradyrhizobium sp. ORS 278] emb|CAL73984.1| Conserved hypothetical protein; Putative MmgE/PrpD family protein [Bradyrhizobium sp. ORS 278] Length = 456 Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/455 (85%), Positives = 424/455 (93%) Query: 1 MAHETATLAAYVADLKYSDIPPEVLERAKVLTLDFLGSAIRARRDAESTPSLMKMLEALA 60 MA ETATLAAYVA+LKY DIPPEVL+RAKVLTLDFLGSAIRARR+AESTPS++KML AL Sbjct: 1 MAQETATLAAYVAELKYDDIPPEVLDRAKVLTLDFLGSAIRARREAESTPSVVKMLAALK 60 Query: 61 LDGKGEATVFGDTKTWTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV 120 LD GEATVFGD +TWTPAVAALLNG +GHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV Sbjct: 61 LDAAGEATVFGDGRTWTPAVAALLNGTMGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV 120 Query: 121 GASGRDVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGAXAAAAKLFGLSKDQ 180 GASGR+VLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGA AAA KLFGLS+ Q Sbjct: 121 GASGREVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGAAAAAGKLFGLSEQQ 180 Query: 181 IISAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLARNDFIGSSEAVEGKHG 240 ++ AFGVSGSQAAGSLQFLVNGAWNKRYQVGA+AMNGVIAATLA+NDF+G+ E+VEGKHG Sbjct: 181 LVYAFGVSGSQAAGSLQFLVNGAWNKRYQVGASAMNGVIAATLAKNDFVGAIESVEGKHG 240 Query: 241 LLVGYSDDAHPDKAVAGLGSTYETLKIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQIR 300 LLVGYSD H +KAVAGLG++YET+KIGVKPYPSCRYTHAAIDA+IA+RREHNLTPDQ++ Sbjct: 241 LLVGYSDTPHREKAVAGLGTSYETMKIGVKPYPSCRYTHAAIDAIIALRREHNLTPDQVK 300 Query: 301 KVEIGLHRNGITLTGDAATKRHPTSVVGGQFSMFFTGAIALDQGHFGWDDYDRLGDAAID 360 +VE+GLHRNGITLTGDAATKRHPTS+VGGQFSMFFTGA+ALDQG FGWDDY RLGDAAI+ Sbjct: 301 RVEVGLHRNGITLTGDAATKRHPTSIVGGQFSMFFTGALALDQGRFGWDDYTRLGDAAIN 360 Query: 361 ALADKFDVVQDDRLEIGRTHPFGARVSITTDDGTHERLYADPSGEPTSFPDAMAMQQKFL 420 ALADKFDVVQDD+LEIGR+HPFGARV+ITT+DG HERL+ DPSGEPTSFP A AM KF+ Sbjct: 361 ALADKFDVVQDDKLEIGRSHPFGARVTITTEDGVHERLHDDPSGEPTSFPSAQAMSDKFI 420 Query: 421 TLARPVLDKRADQLADAILTLERFDRVEKATQLGR 455 TLARPVL RA ADAIL+LERFDRV +AT LGR Sbjct: 421 TLARPVLSTRAQGFADAILSLERFDRVAQATALGR 455 >ref|YP_567287.1| MmgE/PrpD [Rhodopseudomonas palustris BisB5] gb|ABE37386.1| MmgE/PrpD [Rhodopseudomonas palustris BisB5] Length = 457 Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/455 (84%), Positives = 418/455 (91%), Gaps = 1/455 (0%) Query: 1 MAHETATLAAYVADLKYSDIPPEVLERAKVLTLDFLGSAIRARRDAESTPSLMKMLEALA 60 MA+ETATLA YVA L++ DIP +VL RAKVLTLDFLGSAIRARR+AESTPSL+ ML+AL+ Sbjct: 1 MANETATLAGYVAALRFEDIPQDVLARAKVLTLDFLGSAIRARREAESTPSLLAMLQALS 60 Query: 61 LDGKGEATVFGDTKTWTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV 120 LDG G ATVFGD K WTPA+AALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGE+V Sbjct: 61 LDGDGAATVFGDAKRWTPAMAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGELV 120 Query: 121 GASGRDVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGAXAAAAKLFGLSKDQ 180 GASGR+VLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAG YGA AAAAKLFGL++DQ Sbjct: 121 GASGREVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGAYGAAAAAAKLFGLTQDQ 180 Query: 181 IISAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLARNDFIGSSEAVEGKHG 240 I++AFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLA+NDFIG++E+VEG HG Sbjct: 181 IVAAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLAKNDFIGATESVEGIHG 240 Query: 241 LLVGYSDDAHPDKAVAGLGSTYETLKIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQIR 300 LLVGY+D H DKAVA LG YET+KIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQ++ Sbjct: 241 LLVGYTDTPHHDKAVADLGRVYETMKIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQVK 300 Query: 301 KVEIGLHRNGITLTGDAATKRHPTSVVGGQFSMFFTGAIALDQGHFGWDDYDRLGDAAID 360 +VEIGLHRNGITLTGDAATKRHP+S+VGGQFSMFFTGA+AL+QG FGWDDY RLGD AID Sbjct: 301 RVEIGLHRNGITLTGDAATKRHPSSIVGGQFSMFFTGALALEQGSFGWDDYTRLGDPAID 360 Query: 361 ALADKFDVVQDDRLEIGRTHPFGARVSITTDDGTHERLYADPSGEPTSFPDAMAMQQKFL 420 ALAD+FDVVQD RLE G+THPFGARVSITTDDG HER+YADPSGEP +FP AM QKFL Sbjct: 361 ALADRFDVVQDARLE-GKTHPFGARVSITTDDGVHERIYADPSGEPNAFPTDQAMAQKFL 419 Query: 421 TLARPVLDKRADQLADAILTLERFDRVEKATQLGR 455 LARPVLD RA Q ADAILTLERFDRV AT LG+ Sbjct: 420 QLARPVLDGRAQQFADAILTLERFDRVATATALGQ 454 >ref|NP_945915.1| MmgE/PrpD family protein [Rhodopseudomonas palustris CGA009] emb|CAE26006.1| MmgE/PrpD family [Rhodopseudomonas palustris CGA009] Length = 454 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/455 (84%), Positives = 420/455 (92%), Gaps = 1/455 (0%) Query: 1 MAHETATLAAYVADLKYSDIPPEVLERAKVLTLDFLGSAIRARRDAESTPSLMKMLEALA 60 MA+ETATLA YVA L+++DIP +VL RAKVLTLDFLGSAIRARR+AESTPS+++ML+AL+ Sbjct: 1 MANETATLAGYVAALQFTDIPQDVLARAKVLTLDFLGSAIRARREAESTPSILQMLQALS 60 Query: 61 LDGKGEATVFGDTKTWTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGEMV 120 LDG GE+TVFGD K WTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGE+V Sbjct: 61 LDGAGESTVFGDDKRWTPAVAALLNGALGHSLDFDDTHADSSLHPSAPVVPAAFAVGELV 120 Query: 121 GASGRDVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGAXAAAAKLFGLSKDQ 180 GASGRDVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGA AAAAKLFGLS+DQ Sbjct: 121 GASGRDVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGTYGAAAAAAKLFGLSQDQ 180 Query: 181 IISAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLARNDFIGSSEAVEGKHG 240 I++AFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLA+N FIGS+E+VEG HG Sbjct: 181 IVAAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAATLAKNGFIGSTESVEGIHG 240 Query: 241 LLVGYSDDAHPDKAVAGLGSTYETLKIGVKPYPSCRYTHAAIDALIAMRREHNLTPDQIR 300 LLVGY+D HPDKAVA LGS YET+KIGVKPYPSCRYTHAAIDALIAMRREHNLTP+QI Sbjct: 241 LLVGYTDTPHPDKAVADLGSVYETMKIGVKPYPSCRYTHAAIDALIAMRREHNLTPEQIT 300 Query: 301 KVEIGLHRNGITLTGDAATKRHPTSVVGGQFSMFFTGAIALDQGHFGWDDYDRLGDAAID 360 +VE+GLH+NGITLTGDA TKRHP S+VGGQFSMFFTGA+AL+QG FGWDDY RLGD AID Sbjct: 301 RVEVGLHKNGITLTGDAPTKRHPRSIVGGQFSMFFTGALALEQGSFGWDDYTRLGDPAID 360 Query: 361 ALADKFDVVQDDRLEIGRTHPFGARVSITTDDGTHERLYADPSGEPTSFPDAMAMQQKFL 420 ALADKFDVV+D+RLE G+THPFGARVSITT+DG HER+YADPSGEP SFP AM QKFL Sbjct: 361 ALADKFDVVRDERLE-GKTHPFGARVSITTEDGVHERIYADPSGEPGSFPSDQAMTQKFL 419 Query: 421 TLARPVLDKRADQLADAILTLERFDRVEKATQLGR 455 LARPVLD RA ADA+LTLERF +V +AT LGR Sbjct: 420 QLARPVLDGRAQSFADAVLTLERFAKVSEATALGR 454