BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0152.0072.p (407 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241169.1| hypothetical protein BBta_5278 [Bradyrhizobi... 629 e-178 ref|NP_772260.1| MFS permease [Bradyrhizobium japonicum USDA 110... 612 e-173 ref|YP_001204945.1| hypothetical protein BRADO2899 [Bradyrhizobi... 589 e-166 ref|YP_486835.1| hypothetical protein RPB_3228 [Rhodopseudomonas... 554 e-155 ref|YP_004675976.1| hypothetical protein HYPMC_2186 [Hyphomicrob... 528 e-148 >ref|YP_001241169.1| hypothetical protein BBta_5278 [Bradyrhizobium sp. BTAi1] gb|ABQ37263.1| putative membrane protein of unknown function with permease of the major facilitator superfamily domain [Bradyrhizobium sp. BTAi1] Length = 408 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 324/408 (79%), Positives = 356/408 (87%), Gaps = 1/408 (0%) Query: 1 MSSATPAGARDLLGHRPFLFFLSSRSLSRFSSQIGAVAIGWQIYDLTGSAFDLGMVGLVQ 60 MS+ P GARDLL FLFFLSSRSLSRF+SQI AVAIGWQIYDLTG AFDLGMVGL+Q Sbjct: 1 MSTTVPIGARDLLKQSAFLFFLSSRSLSRFASQIAAVAIGWQIYDLTGRAFDLGMVGLIQ 60 Query: 61 FLPTALLVFVAGHAADRFERKRVVQACQIAEALTALFLAASTFAGTISEIQIFVATFVLG 120 FLPTALLVFVAG AADRF+RKRVVQ CQ+AEALTAL+L AG + EIQ+F ATFVLG Sbjct: 61 FLPTALLVFVAGSAADRFQRKRVVQLCQLAEALTALYLCWGASAGQLGEIQLFAATFVLG 120 Query: 121 IAGAFESPATAALLPLIAPQGSLQRATAISSGAAQVATITGPALGGFAYALMPSAPYGIM 180 IAGAFESPATAALLPLIAP+G+LQRA+A+SSGAAQ+ATI GPA+GGFAYA+ P PYG+M Sbjct: 121 IAGAFESPATAALLPLIAPEGTLQRASALSSGAAQLATIAGPAIGGFAYAVAPGLPYGVM 180 Query: 181 MVFWLFGALLTGGIGRLQQAPVKN-GGSSDDLFAGVTFVRSNPAILGTISLDLFAVLFGG 239 M+FWL G LTG + P + GS DDLFAGV F+R+NPAILGTISLDLFAVL GG Sbjct: 181 MLFWLAGMALTGLMQVPDDVPAERLDGSKDDLFAGVRFIRANPAILGTISLDLFAVLLGG 240 Query: 240 VTALLPIYARDILQAGPLGLGILRAAPAVGALLMTMVLARHTINRRVGMRMFQAVIVFGV 299 VTALLPIYARDIL GP GLG+LRAAPAVGAL MT VLAR+TI RRVG+RMFQAVIVFG Sbjct: 241 VTALLPIYARDILDTGPFGLGVLRAAPAVGALAMTAVLARYTIRRRVGLRMFQAVIVFGA 300 Query: 300 ATVVFALSHWMWLSALALAVLGAADTISVVIRFSLVQLATPDEMRGRVGAVNFLFINASN 359 ATVVFALSH MW+S LALAVLGAADTISVVIRFSLVQLATP+EMRGRVGAVNFLFINASN Sbjct: 301 ATVVFALSHVMWVSVLALAVLGAADTISVVIRFSLVQLATPNEMRGRVGAVNFLFINASN 360 Query: 360 QLGQFESGVTAALLGAVPSAVLGGVATVAVALLWMKLFPTLRDVEKLE 407 QLGQFESGVTAAL GA+P+AVLGG+ T+A+ALLWMKLFPTLR VE+LE Sbjct: 361 QLGQFESGVTAALFGAMPAAVLGGLGTIAIALLWMKLFPTLRKVERLE 408 >ref|NP_772260.1| MFS permease [Bradyrhizobium japonicum USDA 110] dbj|BAC50885.1| MFS permease [Bradyrhizobium japonicum USDA 110] Length = 449 Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust. Identities = 328/407 (80%), Positives = 358/407 (87%) Query: 1 MSSATPAGARDLLGHRPFLFFLSSRSLSRFSSQIGAVAIGWQIYDLTGSAFDLGMVGLVQ 60 +S P A LL HR FLFFL SRSLSRFSSQI AVAIGWQIYDLTGSAFDLGMVGLVQ Sbjct: 43 ISENPPVSAGVLLSHRAFLFFLLSRSLSRFSSQIAAVAIGWQIYDLTGSAFDLGMVGLVQ 102 Query: 61 FLPTALLVFVAGHAADRFERKRVVQACQIAEALTALFLAASTFAGTISEIQIFVATFVLG 120 FLPTALLVFVAGHAADRFERKRVVQ CQ+ EA TAL+LA T+ G +SE+QIF+ATFVLG Sbjct: 103 FLPTALLVFVAGHAADRFERKRVVQLCQLVEAATALYLAIITYLGAVSEVQIFIATFVLG 162 Query: 121 IAGAFESPATAALLPLIAPQGSLQRATAISSGAAQVATITGPALGGFAYALMPSAPYGIM 180 IAGAFESP TAALLPLIAPQGSLQRATA++SGA QVATITGPALGGFAYA+ P Y +M Sbjct: 163 IAGAFESPTTAALLPLIAPQGSLQRATAVASGAGQVATITGPALGGFAYAVAPHLAYAVM 222 Query: 181 MVFWLFGALLTGGIGRLQQAPVKNGGSSDDLFAGVTFVRSNPAILGTISLDLFAVLFGGV 240 ++FW+ G +LTG I QA K G +D++FAGV F+RSNPAILGTISLDLFAVLFGGV Sbjct: 223 LLFWILGMILTGFIRPRPQAVAKEGTDADNIFAGVRFIRSNPAILGTISLDLFAVLFGGV 282 Query: 241 TALLPIYARDILQAGPLGLGILRAAPAVGALLMTMVLARHTINRRVGMRMFQAVIVFGVA 300 TALLPIYARDILQ GP+GLG+LRAAPAVGALLM MVLARH I+R VG+RMFQAVIVFG+A Sbjct: 283 TALLPIYARDILQTGPIGLGVLRAAPAVGALLMIMVLARHAISRHVGLRMFQAVIVFGIA 342 Query: 301 TVVFALSHWMWLSALALAVLGAADTISVVIRFSLVQLATPDEMRGRVGAVNFLFINASNQ 360 T+VFALS WMWLS L+LA+LGAADTISVVIRFSLVQL+TPDEMRGRVGAVNFLFINASNQ Sbjct: 343 TIVFALSSWMWLSVLSLAILGAADTISVVIRFSLVQLSTPDEMRGRVGAVNFLFINASNQ 402 Query: 361 LGQFESGVTAALLGAVPSAVLGGVATVAVALLWMKLFPTLRDVEKLE 407 LGQFESGV AALLGA+P+AV GGV TVAVALLWMKLFPTLR VE LE Sbjct: 403 LGQFESGVAAALLGAMPAAVFGGVCTVAVALLWMKLFPTLRRVESLE 449 >ref|YP_001204945.1| hypothetical protein BRADO2899 [Bradyrhizobium sp. ORS 278] emb|CAL76708.1| conserved hypothetical protein; putative membrane protein; putative permease of the major facilitator superfamily [Bradyrhizobium sp. ORS 278] Length = 408 Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust. Identities = 316/408 (77%), Positives = 352/408 (86%), Gaps = 1/408 (0%) Query: 1 MSSATPAGARDLLGHRPFLFFLSSRSLSRFSSQIGAVAIGWQIYDLTGSAFDLGMVGLVQ 60 MS+ P GARDLL FL FLSSRSLSRF+SQI AVAIGWQIYDLTG AFDLGMVGL+Q Sbjct: 1 MSTTVPLGARDLLKQSAFLLFLSSRSLSRFASQIAAVAIGWQIYDLTGRAFDLGMVGLIQ 60 Query: 61 FLPTALLVFVAGHAADRFERKRVVQACQIAEALTALFLAASTFAGTISEIQIFVATFVLG 120 FLPT LLVFVAG AADRF RKRVVQ CQ+AEALTAL+L +AG + E+Q+F ATFVLG Sbjct: 61 FLPTGLLVFVAGSAADRFPRKRVVQLCQLAEALTALYLCWGAYAGQLGELQLFAATFVLG 120 Query: 121 IAGAFESPATAALLPLIAPQGSLQRATAISSGAAQVATITGPALGGFAYALMPSAPYGIM 180 IAGAFESPATAALLPLIAP+G+LQRA+A+SSGAAQ+ATI GPA+GGFAYA+ P PYGIM Sbjct: 121 IAGAFESPATAALLPLIAPEGTLQRASALSSGAAQLATIAGPAIGGFAYAVAPRLPYGIM 180 Query: 181 MVFWLFGALLTGGIGRLQQAPV-KNGGSSDDLFAGVTFVRSNPAILGTISLDLFAVLFGG 239 M+FWL G LTG + P + GS DDLFAGV F+R+NPAILGTISLDLFAVL GG Sbjct: 181 MLFWLAGMALTGLMQVPDDVPAGRLDGSKDDLFAGVRFIRANPAILGTISLDLFAVLLGG 240 Query: 240 VTALLPIYARDILQAGPLGLGILRAAPAVGALLMTMVLARHTINRRVGMRMFQAVIVFGV 299 VTALLPIYARD+L GP GLG+LRAAPAVGAL MT VLAR TI RRVG+RMFQAVIVFG Sbjct: 241 VTALLPIYARDVLDTGPFGLGVLRAAPAVGALAMTAVLARTTIKRRVGLRMFQAVIVFGA 300 Query: 300 ATVVFALSHWMWLSALALAVLGAADTISVVIRFSLVQLATPDEMRGRVGAVNFLFINASN 359 ATVVFA+SH MW+S LALA+LGAADTISVVIRFSLVQLATP+EMRGRVGAVNFLFINASN Sbjct: 301 ATVVFAVSHIMWISVLALAILGAADTISVVIRFSLVQLATPNEMRGRVGAVNFLFINASN 360 Query: 360 QLGQFESGVTAALLGAVPSAVLGGVATVAVALLWMKLFPTLRDVEKLE 407 QLGQFESGVTAAL GA+P+A++GG+ T+AVALLWMK+FP LR VE+LE Sbjct: 361 QLGQFESGVTAALFGAMPAAIIGGLGTIAVALLWMKIFPELRKVERLE 408 >ref|YP_486835.1| hypothetical protein RPB_3228 [Rhodopseudomonas palustris HaA2] gb|ABD07924.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 405 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 283/403 (70%), Positives = 328/403 (81%) Query: 5 TPAGARDLLGHRPFLFFLSSRSLSRFSSQIGAVAIGWQIYDLTGSAFDLGMVGLVQFLPT 64 T A + LL HR F +L +R+ SRF+SQI AVA+GWQ+YD+T SAF LGM+GLVQF+PT Sbjct: 3 TLAASGSLLRHRAFAIYLGARTSSRFASQIAAVAVGWQVYDMTSSAFALGMIGLVQFIPT 62 Query: 65 ALLVFVAGHAADRFERKRVVQACQIAEALTALFLAASTFAGTISEIQIFVATFVLGIAGA 124 ALLVFVAGHA DRF+RKRVVQ CQI E LTA+FLA T+ G ++ QIFVA ++GIA + Sbjct: 63 ALLVFVAGHAVDRFDRKRVVQLCQIVEGLTAVFLAVGTYGGWLTVPQIFVAMTLVGIATS 122 Query: 125 FESPATAALLPLIAPQGSLQRATAISSGAAQVATITGPALGGFAYALMPSAPYGIMMVFW 184 FESPA AALLP + P G+LQRATA S+G AQ+A ITGPALGGFAYA P PY +M FW Sbjct: 123 FESPAVAALLPSVVPDGTLQRATATSTGFAQLAMITGPALGGFAYAFAPGLPYVMMAGFW 182 Query: 185 LFGALLTGGIGRLQQAPVKNGGSSDDLFAGVTFVRSNPAILGTISLDLFAVLFGGVTALL 244 + G++L + + P + DDL++G+ FVRSNPAILGTISLDLFAVL GG TALL Sbjct: 183 IAGSVLMPLVVVARPVPTEPSTEIDDLYSGLRFVRSNPAILGTISLDLFAVLLGGATALL 242 Query: 245 PIYARDILQAGPLGLGILRAAPAVGALLMTMVLARHTINRRVGMRMFQAVIVFGVATVVF 304 PIYARDIL GP GLG+LRAAPA+GAL MT+ LARH I RVG+RMFQAVIVFGVAT+VF Sbjct: 243 PIYARDILHTGPWGLGLLRAAPAIGALAMTIFLARHAITSRVGLRMFQAVIVFGVATIVF 302 Query: 305 ALSHWMWLSALALAVLGAADTISVVIRFSLVQLATPDEMRGRVGAVNFLFINASNQLGQF 364 ALS W+WLS AL ++GAADT+SVVIRFSLVQL+TPD MRGRVGAVNFLFINASNQLGQF Sbjct: 303 ALSWWLWLSVAALVIMGAADTVSVVIRFSLVQLSTPDNMRGRVGAVNFLFINASNQLGQF 362 Query: 365 ESGVTAALLGAVPSAVLGGVATVAVALLWMKLFPTLRDVEKLE 407 ESGVTAAL GA+P+AVLGGV TV VALLWMKLFPTLR VE+LE Sbjct: 363 ESGVTAALFGAMPAAVLGGVGTVLVALLWMKLFPTLRKVERLE 405 >ref|YP_004675976.1| hypothetical protein HYPMC_2186 [Hyphomicrobium sp. MC1] emb|CCB65408.1| conserved membrane protein of unknown function [Hyphomicrobium sp. MC1] Length = 408 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/398 (67%), Positives = 322/398 (80%) Query: 10 RDLLGHRPFLFFLSSRSLSRFSSQIGAVAIGWQIYDLTGSAFDLGMVGLVQFLPTALLVF 69 + L H P +FL R S+F+SQI VA+GWQ+Y LT SAFDLGMVGLVQFLPTA+LVF Sbjct: 11 QTLWRHSPLQYFLWGRGFSKFASQILTVAVGWQVYALTSSAFDLGMVGLVQFLPTAILVF 70 Query: 70 VAGHAADRFERKRVVQACQIAEALTALFLAASTFAGTISEIQIFVATFVLGIAGAFESPA 129 VAGHA+DR++RKRV+Q CQI EA A+FLA ++ G I+ QIFVA V G+AGAFESPA Sbjct: 71 VAGHASDRYDRKRVIQLCQIVEATAAVFLAWGSYQGWITVPQIFVAVAVFGVAGAFESPA 130 Query: 130 TAALLPLIAPQGSLQRATAISSGAAQVATITGPALGGFAYALMPSAPYGIMMVFWLFGAL 189 TAALLP +AP G LQ+ATA+S+G Q A I+GPA+GG AY + P+ PY IM VFW+ ++ Sbjct: 131 TAALLPGVAPNGLLQKATALSTGVFQFAAISGPAIGGLAYGISPAVPYVIMTVFWIVASV 190 Query: 190 LTGGIGRLQQAPVKNGGSSDDLFAGVTFVRSNPAILGTISLDLFAVLFGGVTALLPIYAR 249 L G I + + ++ LFAG FVR+NPAILGTISLDLFAVL GG +ALLPIYAR Sbjct: 191 LNGAIVLDRPVAPRESPTAGALFAGAHFVRNNPAILGTISLDLFAVLLGGASALLPIYAR 250 Query: 250 DILQAGPLGLGILRAAPAVGALLMTMVLARHTINRRVGMRMFQAVIVFGVATVVFALSHW 309 DIL GP GLG+LR A AVGAL+MT +LA + I + VGMRMFQAVIVFG+ATVVFALS Sbjct: 251 DILHTGPWGLGMLRGAQAVGALMMTGILAHYAITKHVGMRMFQAVIVFGIATVVFALSKE 310 Query: 310 MWLSALALAVLGAADTISVVIRFSLVQLATPDEMRGRVGAVNFLFINASNQLGQFESGVT 369 +WLS LALAV+GAADTISVVIR SLVQLATPD+MRGRVGAVNFLFINASNQLG+FESG+T Sbjct: 311 VWLSVLALAVMGAADTISVVIRVSLVQLATPDDMRGRVGAVNFLFINASNQLGEFESGMT 370 Query: 370 AALLGAVPSAVLGGVATVAVALLWMKLFPTLRDVEKLE 407 AALLGAVP+AVLGG+ T+AVAL+WMKLFP LR++++LE Sbjct: 371 AALLGAVPAAVLGGLGTIAVALVWMKLFPVLRNLQRLE 408