BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0152.0048.p (472 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772243.1| amidase [Bradyrhizobium japonicum USDA 110] >gi... 744 0.0 ref|YP_001204960.1| amidase [Bradyrhizobium sp. ORS 278] >gi|146... 701 0.0 ref|YP_001241154.1| amidase [Bradyrhizobium sp. BTAi1] >gi|14640... 676 0.0 ref|YP_485742.1| amidase [Rhodopseudomonas palustris HaA2] >gi|8... 650 0.0 ref|YP_570421.1| amidase [Rhodopseudomonas palustris BisB5] >gi|... 641 0.0 >ref|NP_772243.1| amidase [Bradyrhizobium japonicum USDA 110] dbj|BAC50868.1| glutamyl-tRNA amidotransferase subunit A [Bradyrhizobium japonicum USDA 110] Length = 473 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/473 (77%), Positives = 417/473 (88%), Gaps = 1/473 (0%) Query: 1 MHKPK-GDAITSLHDLSAVDLLAGYRAKQFSPSEVLEEIISQVATWEPHIKALYLYDPEG 59 MHK +A+TSLHDLSAVDL+AGYRAKQFSPSEVLE++++ VA WEPH++ALY +DP+G Sbjct: 1 MHKKSVEEAVTSLHDLSAVDLIAGYRAKQFSPSEVLEDVLTHVAAWEPHLRALYAFDPDG 60 Query: 60 ARKVAKTSTERWQQAEPAGTLDGVPATIKDNVATKGQPVPLGAASVKLAPAEKDAPPAAR 119 AR+ AK ST RW EP+G LDGVP T+KDN+ATKG PVPLGAASVKL PAEKDAPPAAR Sbjct: 61 AREAAKASTARWTGGEPSGPLDGVPVTVKDNIATKGVPVPLGAASVKLVPAEKDAPPAAR 120 Query: 120 LREAGCVIFSKTTMPDYGMLSSGLSSFHPLTRNPWDVSKNPGGSSAGAGAAGAAGYGPLH 179 LREAG +IF+KTTMPDYGMLSSGLSSFH L RNPWD+SKNPGGSSAGAGAA AAGYGPLH Sbjct: 121 LREAGAIIFAKTTMPDYGMLSSGLSSFHALARNPWDLSKNPGGSSAGAGAAAAAGYGPLH 180 Query: 180 LGTDIGGSVRLPANWCGLVALKPSLGRVPIDPPYVGRVAGPMTRTVDDAALMMSVLSRPD 239 LGTDIGGSVRLPA WCGLV LKPS GRVPIDP YVGRVAGPMTRTVDD ALMMS +++PD Sbjct: 181 LGTDIGGSVRLPAGWCGLVGLKPSFGRVPIDPTYVGRVAGPMTRTVDDCALMMSAIAKPD 240 Query: 240 RRDGMSLPALEVNWKALEKSPRKLRIGLMLDAGSGQKVEKEVREVVVKAAKAFESAGAVI 299 RRDGMSLPA +NWK EKSPRKLRIGLMLDAG G E+ VR+V VKAAKAFESAG+V+ Sbjct: 241 RRDGMSLPAEPLNWKGPEKSPRKLRIGLMLDAGVGLPAERPVRDVAVKAAKAFESAGSVV 300 Query: 300 TEINGILTPEILEGLDNFWRARTWDELSKLSQAERGKTLPYILNWAEAGAKLSGVDVVRG 359 TE++GILT E+L+GLDNFWRAR WD+LSKL+ AE+ K LPYI W +GAKLSGVDV+RG Sbjct: 301 TEVDGILTREMLDGLDNFWRARMWDDLSKLTPAEQAKVLPYIFKWGASGAKLSGVDVIRG 360 Query: 360 FNQTMAIRAAAAKLFCEVDYVISPVSPVVNFPAEFAAPLNDPAKPFEHICFTVPWNMSEN 419 FNQTMAIRAAA+KLFCE+DYVISP +P VN+PA++A+P NDP +PFEHI +TVPWNMSEN Sbjct: 361 FNQTMAIRAAASKLFCELDYVISPTAPNVNYPADWASPTNDPMRPFEHIAYTVPWNMSEN 420 Query: 420 PALSINGGYDKKGFPIGVQIIGRRFDDIGVLGMGKAFEGLRGPQKPWPAPPKK 472 PA+S+NGG+D GFPIGVQI+GRRFDDIGVLGM KAFEGLRGPQ+PWP PP + Sbjct: 421 PAVSLNGGFDANGFPIGVQIVGRRFDDIGVLGMAKAFEGLRGPQRPWPKPPAR 473 >ref|YP_001204960.1| amidase [Bradyrhizobium sp. ORS 278] emb|CAL76723.1| putative amidase [Bradyrhizobium sp. ORS 278] Length = 473 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/473 (74%), Positives = 399/473 (84%), Gaps = 1/473 (0%) Query: 1 MHKPKGDAITSLHDLSAVDLLAGYRAKQFSPSEVLEEIISQVATWEPHIKALYLYDPEGA 60 MHKP D +TSLHDLSAVDL+AGYRA+QFSPSEV++++++ VA WEP IKALYL D + A Sbjct: 1 MHKPVSDDVTSLHDLSAVDLIAGYRARQFSPSEVMDDVLAHVAVWEPDIKALYLLDVDAA 60 Query: 61 RKVAKTSTERWQQAEPAGTLDGVPATIKDNVATKGQPVPLGAASVKLAPAEKDAPPAARL 120 R AK STERW EPAG LDGVPAT+KDN+ATKGQP+PLGAASV AP DAPP ARL Sbjct: 61 RAAAKASTERWVNDEPAGVLDGVPATVKDNIATKGQPMPLGAASVTRAPLAADAPPVARL 120 Query: 121 REAGCVIFSKTTMPDYGMLSSGLSSFHPLTRNPWDVSKNPGGSSAGAGAAGAAGYGPLHL 180 REAG +IF+KTTMPDYGMLSSGLSSFHPLTRNPWD+ NPGGSSAGAGAA AAGYGPLH+ Sbjct: 121 REAGAIIFAKTTMPDYGMLSSGLSSFHPLTRNPWDLRMNPGGSSAGAGAAAAAGYGPLHV 180 Query: 181 GTDIGGSVRLPANWCGLVALKPSLGRVPIDPPYVGRVAGPMTRTVDDAALMMSVLSRPDR 240 GTDIGGS+RLPA+WCGLV LKPS GRVPIDPPYVGRVAGPMTR VDDAALMMSVLS+PDR Sbjct: 181 GTDIGGSIRLPASWCGLVGLKPSFGRVPIDPPYVGRVAGPMTRIVDDAALMMSVLSKPDR 240 Query: 241 RDGMSLPALEVNWKALEKSPRKLRIGLMLD-AGSGQKVEKEVREVVVKAAKAFESAGAVI 299 RDG SLP +++WK EK RKLRIGLMLD G GQ +E+ VR + AAKAFE AGAVI Sbjct: 241 RDGTSLPPSDLHWKVAEKPVRKLRIGLMLDLGGVGQALEQPVRATTLAAAKAFEEAGAVI 300 Query: 300 TEINGILTPEILEGLDNFWRARTWDELSKLSQAERGKTLPYILNWAEAGAKLSGVDVVRG 359 TE+ G LT ++L+GLDNFWRAR WD+L++L+ R KTLPYIL WAE G LSGV+VVRG Sbjct: 301 TEVKGFLTRDMLDGLDNFWRARLWDDLARLAPEVRAKTLPYILQWAERGTALSGVEVVRG 360 Query: 360 FNQTMAIRAAAAKLFCEVDYVISPVSPVVNFPAEFAAPLNDPAKPFEHICFTVPWNMSEN 419 FN TMA+RAAAAKLFC+ DY+ISPVSP V FPAEFA+P+NDP KPFEHI +TVPWNMSEN Sbjct: 361 FNVTMALRAAAAKLFCDYDYIISPVSPGVKFPAEFASPVNDPEKPFEHITYTVPWNMSEN 420 Query: 420 PALSINGGYDKKGFPIGVQIIGRRFDDIGVLGMGKAFEGLRGPQKPWPAPPKK 472 PA+S+N GYD GFPIG+QI+GRRFDD+GVLGM K FE LRG Q+PWP P K Sbjct: 421 PAISVNAGYDPDGFPIGLQIVGRRFDDVGVLGMAKTFESLRGEQRPWPKAPAK 473 >ref|YP_001241154.1| amidase [Bradyrhizobium sp. BTAi1] gb|ABQ37248.1| putative amidase [Bradyrhizobium sp. BTAi1] Length = 473 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/471 (74%), Positives = 399/471 (84%), Gaps = 1/471 (0%) Query: 1 MHKPKGDAITSLHDLSAVDLLAGYRAKQFSPSEVLEEIISQVATWEPHIKALYLYDPEGA 60 MHKP D +TSLHDLSAVDL+AGYRA+QFSPSEV+E++++ VA WEPHIKALYL D + A Sbjct: 1 MHKPASDDVTSLHDLSAVDLIAGYRARQFSPSEVMEDVLAHVAAWEPHIKALYLLDVDAA 60 Query: 61 RKVAKTSTERWQQAEPAGTLDGVPATIKDNVATKGQPVPLGAASVKLAPAEKDAPPAARL 120 R AK STERW EP G LDGVPAT+KDN+ATKGQP+PLGAASV AP DAPPAARL Sbjct: 61 RAAAKLSTERWANDEPTGVLDGVPATVKDNIATKGQPMPLGAASVTRAPLAADAPPAARL 120 Query: 121 REAGCVIFSKTTMPDYGMLSSGLSSFHPLTRNPWDVSKNPGGSSAGAGAAGAAGYGPLHL 180 REAG +IF+KTTMPDYGMLSSGLSSFHPLTRNPWD+ NPGGSSAGAGAA AAGYGPLH+ Sbjct: 121 REAGAIIFAKTTMPDYGMLSSGLSSFHPLTRNPWDLRMNPGGSSAGAGAAAAAGYGPLHV 180 Query: 181 GTDIGGSVRLPANWCGLVALKPSLGRVPIDPPYVGRVAGPMTRTVDDAALMMSVLSRPDR 240 GTDIGGS+RLPA+WCGLV LKPS GRVP+DPPYVGRVAGPMTR VDDAALMMSVLS+PDR Sbjct: 181 GTDIGGSIRLPASWCGLVGLKPSFGRVPLDPPYVGRVAGPMTRIVDDAALMMSVLSKPDR 240 Query: 241 RDGMSLPALEVNWKALEKSPRKLRIGLMLDAGS-GQKVEKEVREVVVKAAKAFESAGAVI 299 RDG SLP +++WK EK RKLRIGLMLD G GQ +E+ VR + AAKAF AGAV+ Sbjct: 241 RDGTSLPPSDLHWKIAEKPVRKLRIGLMLDVGGVGQALEEPVRATTLAAAKAFADAGAVV 300 Query: 300 TEINGILTPEILEGLDNFWRARTWDELSKLSQAERGKTLPYILNWAEAGAKLSGVDVVRG 359 +E+ G LT E+L+GLDNFWRAR WD+L++L+ R KTLPYIL WAE GA LSGV+V+RG Sbjct: 301 SEVKGFLTREMLDGLDNFWRARLWDDLARLAPEVRAKTLPYILQWAERGATLSGVEVIRG 360 Query: 360 FNQTMAIRAAAAKLFCEVDYVISPVSPVVNFPAEFAAPLNDPAKPFEHICFTVPWNMSEN 419 FN TM +RAAAA+LF E DY+ISPVSP V FPAEFA+P+NDP PFEHI +TVPWNMSEN Sbjct: 361 FNVTMTLRAAAARLFTEYDYIISPVSPGVKFPAEFASPVNDPQAPFEHITYTVPWNMSEN 420 Query: 420 PALSINGGYDKKGFPIGVQIIGRRFDDIGVLGMGKAFEGLRGPQKPWPAPP 470 PA+S+N GYD GFPIG+QI+GRRFDD+GVLG+ K FEGLRG Q+PWPAPP Sbjct: 421 PAISVNAGYDADGFPIGLQIVGRRFDDVGVLGLAKTFEGLRGEQRPWPAPP 471 >ref|YP_485742.1| amidase [Rhodopseudomonas palustris HaA2] gb|ABD06831.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 471 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/462 (69%), Positives = 378/462 (81%) Query: 10 TSLHDLSAVDLLAGYRAKQFSPSEVLEEIISQVATWEPHIKALYLYDPEGARKVAKTSTE 69 T+LHDLSA +LLAGY AKQFSPSEV++++I+Q WEPH+ ALY +DP+GAR AK STE Sbjct: 10 TALHDLSATELLAGYYAKQFSPSEVIDDVIAQAQRWEPHLNALYAFDPDGARAAAKQSTE 69 Query: 70 RWQQAEPAGTLDGVPATIKDNVATKGQPVPLGAASVKLAPAEKDAPPAARLREAGCVIFS 129 RW + EP G LDGVP TIK+NVATKG P+PLG PA DAPPAARLREAG ++++ Sbjct: 70 RWHKGEPQGVLDGVPVTIKENVATKGVPIPLGVPVTAPTPASVDAPPAARLREAGAILWT 129 Query: 130 KTTMPDYGMLSSGLSSFHPLTRNPWDVSKNPGGSSAGAGAAGAAGYGPLHLGTDIGGSVR 189 KTTMPD+GMLSSGLSSFH +TRNPWD ++N GGSS+GAGAAGAAGYGPLHLGTDIGGSVR Sbjct: 130 KTTMPDFGMLSSGLSSFHGVTRNPWDTTQNTGGSSSGAGAAGAAGYGPLHLGTDIGGSVR 189 Query: 190 LPANWCGLVALKPSLGRVPIDPPYVGRVAGPMTRTVDDAALMMSVLSRPDRRDGMSLPAL 249 LPANWCGL ALKPSLGRVPIDPPYVGR AGPMTRTVDD+ALMMSVLS PD RDGM+LP Sbjct: 190 LPANWCGLFALKPSLGRVPIDPPYVGRCAGPMTRTVDDSALMMSVLSLPDARDGMNLPPN 249 Query: 250 EVNWKALEKSPRKLRIGLMLDAGSGQKVEKEVREVVVKAAKAFESAGAVITEINGILTPE 309 + W L R IGL+ D G G K++ EVR VV AA+ FE+ GA++ E++ T E Sbjct: 250 DFAWHDLATDLRGKTIGLVTDLGFGMKLDDEVRRVVTDAARTFEAQGAIVREVSLGFTRE 309 Query: 310 ILEGLDNFWRARTWDELSKLSQAERGKTLPYILNWAEAGAKLSGVDVVRGFNQTMAIRAA 369 +++GLDNFWRAR WD++SKLS+A+R + LPYI+ WAE GA LSGV+V+RGFNQTMA+RA Sbjct: 310 MMDGLDNFWRARMWDDVSKLSEAQRAQVLPYIVRWAERGATLSGVEVMRGFNQTMAVRAM 369 Query: 370 AAKLFCEVDYVISPVSPVVNFPAEFAAPLNDPAKPFEHICFTVPWNMSENPALSINGGYD 429 AAKLF E+DY+ISPV+PVV+FPAE +PL+DP PF+HI +TVPWNMSENPA SINGGY Sbjct: 370 AAKLFAEIDYLISPVAPVVSFPAELPSPLDDPEIPFDHILYTVPWNMSENPAASINGGYS 429 Query: 430 KKGFPIGVQIIGRRFDDIGVLGMGKAFEGLRGPQKPWPAPPK 471 GFPIGVQI+GRRFDD+GVL M KAFEGLR QKPWP P+ Sbjct: 430 SNGFPIGVQIVGRRFDDLGVLRMAKAFEGLREAQKPWPTVPR 471 >ref|YP_570421.1| amidase [Rhodopseudomonas palustris BisB5] gb|ABE40520.1| Amidase [Rhodopseudomonas palustris BisB5] Length = 471 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/462 (70%), Positives = 391/462 (84%) Query: 10 TSLHDLSAVDLLAGYRAKQFSPSEVLEEIISQVATWEPHIKALYLYDPEGARKVAKTSTE 69 T+LH LSA +LLAGY AKQFSP +V++++I+Q+A WEPHIKALY +DP+GAR VAK STE Sbjct: 10 TALHALSATELLAGYYAKQFSPLDVIDDVIAQIARWEPHIKALYAFDPDGARAVAKASTE 69 Query: 70 RWQQAEPAGTLDGVPATIKDNVATKGQPVPLGAASVKLAPAEKDAPPAARLREAGCVIFS 129 RW+ ++P G LDGVP TIK+N+AT+G PVPLGAA+ +LAPA DAPP+ARLREAG VI+S Sbjct: 70 RWRNSDPIGPLDGVPVTIKENLATQGTPVPLGAATTRLAPAPADAPPSARLREAGAVIYS 129 Query: 130 KTTMPDYGMLSSGLSSFHPLTRNPWDVSKNPGGSSAGAGAAGAAGYGPLHLGTDIGGSVR 189 KTTMPD+GMLSSGLSSFH +TRNPWD+++N GGSS+GAGAAGAAGYGPLHLG+DIGGSVR Sbjct: 130 KTTMPDFGMLSSGLSSFHGITRNPWDLTQNTGGSSSGAGAAGAAGYGPLHLGSDIGGSVR 189 Query: 190 LPANWCGLVALKPSLGRVPIDPPYVGRVAGPMTRTVDDAALMMSVLSRPDRRDGMSLPAL 249 LPANWCGL ALKPSLGRVPIDPPYVGR AGPMTRTVDDAALMMSVLS+PD RDGMSLP Sbjct: 190 LPANWCGLFALKPSLGRVPIDPPYVGRCAGPMTRTVDDAALMMSVLSQPDARDGMSLPPH 249 Query: 250 EVNWKALEKSPRKLRIGLMLDAGSGQKVEKEVREVVVKAAKAFESAGAVITEINGILTPE 309 + W L R ++GL+ D G G +E EVR+VVVKAA+AFE+ GA++ E+ T Sbjct: 250 DFAWHDLAIDLRGKKLGLVTDLGFGLALEDEVRDVVVKAARAFEAQGAILQEVQLGFTRA 309 Query: 310 ILEGLDNFWRARTWDELSKLSQAERGKTLPYILNWAEAGAKLSGVDVVRGFNQTMAIRAA 369 +++GLDNFWRAR WD+L++LS +R + LPYI WAE GA+L+GV+V+RGFN TMA+RA Sbjct: 310 MMDGLDNFWRARLWDDLAQLSDEQRSQVLPYIYRWAERGAQLTGVEVMRGFNMTMAVRAI 369 Query: 370 AAKLFCEVDYVISPVSPVVNFPAEFAAPLNDPAKPFEHICFTVPWNMSENPALSINGGYD 429 A+LF ++DY+ISPV+PVV+FPAE A+PL+DP KPF+HI +TVPWNM+ENPA SINGGY Sbjct: 370 GAELFADIDYLISPVAPVVSFPAERASPLDDPDKPFDHILYTVPWNMAENPAASINGGYS 429 Query: 430 KKGFPIGVQIIGRRFDDIGVLGMGKAFEGLRGPQKPWPAPPK 471 KGFPIGVQI+GRRFDD+GVL M KAFEGLRG Q PWP PP+ Sbjct: 430 AKGFPIGVQIVGRRFDDLGVLKMAKAFEGLRGRQLPWPEPPR 471