BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0152.0036.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241150.1| putative ABC transporter permease [Bradyrhiz... 508 e-142 ref|NP_772239.1| ABC transporter permease protein [Bradyrhizobiu... 507 e-141 ref|YP_001204964.1| putative ABC transporter permease membrane p... 504 e-141 ref|YP_484844.1| binding-protein dependent transport system inne... 501 e-140 ref|YP_571145.1| binding-protein-dependent transport systems inn... 498 e-139 >ref|YP_001241150.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ37244.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 296 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 256/296 (86%), Positives = 279/296 (94%), Gaps = 1/296 (0%) Query: 1 MAIETLPESSIPVTRPFRVKFGFLTSTPIIAVATICLALIILMAIFAPLLAPHDPLLLTP 60 MAI T PE SIPVT KFGFLTSTPIIAVATICL+LI+L++I APLLAPHDP+LL P Sbjct: 1 MAIVTTPEPSIPVTTRLGPKFGFLTSTPIIAVATICLSLIVLVSILAPLLAPHDPVLLAP 60 Query: 61 SQRLKPSSAQYLLGTDAYGRDLLSRIIYGARISLVIGLGAAVCSIGIGLLIGLVAGFFRW 120 +QRLKPSSAQYLLGTDAYGRDLLSR IYG RISL++G+GAAV SI IGL+IGLV+GFFRW Sbjct: 61 AQRLKPSSAQYLLGTDAYGRDLLSRTIYGGRISLLVGVGAAVISIAIGLVIGLVSGFFRW 120 Query: 121 VDAVLMRVMDGLMAIPAILLAIAVVSLSGASIWTVMVAITIPEIPRVARLVRSVVLTARE 180 VDA++MRVMDGLMAIP+ILLAIAVVSLSGAS+ TVM+AITI EIPRVARLVRSVVLTARE Sbjct: 121 VDAIMMRVMDGLMAIPSILLAIAVVSLSGASVATVMIAITIVEIPRVARLVRSVVLTARE 180 Query: 181 EPYVEAAISLGTSLPKIMWRHLMPNTIAPLIVQGTYVCASAILTEAILSFLGAGISPETP 240 EPYVEAAISLGTS+PKIMWRHLMPNTIAPLIVQGTY+CA+AILTEAILSFLGAGISPETP Sbjct: 181 EPYVEAAISLGTSMPKIMWRHLMPNTIAPLIVQGTYICAAAILTEAILSFLGAGISPETP 240 Query: 241 TWGNIMAEGRAHFQVKPSLIFWPGLLLSIAILSVNLIGDAARDALDPRMKQRE-GK 295 TWGNIMAEGR++FQ+KPSLIFWPGLLLSIAILS+NLIGDAARDALDPRMKQRE GK Sbjct: 241 TWGNIMAEGRSYFQIKPSLIFWPGLLLSIAILSINLIGDAARDALDPRMKQREAGK 296 >ref|NP_772239.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC50864.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 295 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 247/295 (83%), Positives = 281/295 (95%) Query: 1 MAIETLPESSIPVTRPFRVKFGFLTSTPIIAVATICLALIILMAIFAPLLAPHDPLLLTP 60 M+++TLP+SSIP+T P R +FGFLTSTPIIA AT+ LALI+L++I APL+APHDP+ L P Sbjct: 1 MSVDTLPQSSIPITSPLRPRFGFLTSTPIIATATVLLALIVLISILAPLIAPHDPIQLAP 60 Query: 61 SQRLKPSSAQYLLGTDAYGRDLLSRIIYGARISLVIGLGAAVCSIGIGLLIGLVAGFFRW 120 SQRLKP+SAQ+LLGTDAYGRDLLSR+IYG RISL+IG+G+A+ SI IGL IGLV+GFF+ Sbjct: 61 SQRLKPTSAQFLLGTDAYGRDLLSRVIYGGRISLLIGVGSAILSIVIGLAIGLVSGFFKL 120 Query: 121 VDAVLMRVMDGLMAIPAILLAIAVVSLSGASIWTVMVAITIPEIPRVARLVRSVVLTARE 180 VD+VLMRVMDGLMA+P+ILLAIAVVSLSGASIWTV++AITIPE+PRVARLVRSVVL+ARE Sbjct: 121 VDSVLMRVMDGLMAMPSILLAIAVVSLSGASIWTVLIAITIPEVPRVARLVRSVVLSARE 180 Query: 181 EPYVEAAISLGTSLPKIMWRHLMPNTIAPLIVQGTYVCASAILTEAILSFLGAGISPETP 240 EPYVEAAIS+G+SLPKIMWRHLMPNTIAPLIVQG+YVCASAILTEAILSFLGAGISPETP Sbjct: 181 EPYVEAAISVGSSLPKIMWRHLMPNTIAPLIVQGSYVCASAILTEAILSFLGAGISPETP 240 Query: 241 TWGNIMAEGRAHFQVKPSLIFWPGLLLSIAILSVNLIGDAARDALDPRMKQREGK 295 TWGNIMAEGR +FQ+KPSLIFWPGLLLSIAILS+NLIGDAARDALDPRMKQREGK Sbjct: 241 TWGNIMAEGRQYFQIKPSLIFWPGLLLSIAILSINLIGDAARDALDPRMKQREGK 295 >ref|YP_001204964.1| putative ABC transporter permease membrane protein [Bradyrhizobium sp. ORS 278] emb|CAL76727.1| putative ABC transporter (permease protein); putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 296 Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust. Identities = 252/296 (85%), Positives = 278/296 (93%), Gaps = 1/296 (0%) Query: 1 MAIETLPESSIPVTRPFRVKFGFLTSTPIIAVATICLALIILMAIFAPLLAPHDPLLLTP 60 MAI T PE SIPVT +FGFLTSTPIIAVAT+CL LI++++I APLLAPHDP+LL P Sbjct: 1 MAIVTTPEPSIPVTTRLGPRFGFLTSTPIIAVATVCLTLIVIVSILAPLLAPHDPVLLAP 60 Query: 61 SQRLKPSSAQYLLGTDAYGRDLLSRIIYGARISLVIGLGAAVCSIGIGLLIGLVAGFFRW 120 +QRLKP+SAQYLLGTDAYGRDLLSR IYG RISL++G+GAAV SI IGL+IGLV+GFFRW Sbjct: 61 AQRLKPASAQYLLGTDAYGRDLLSRTIYGGRISLLVGVGAAVISIAIGLVIGLVSGFFRW 120 Query: 121 VDAVLMRVMDGLMAIPAILLAIAVVSLSGASIWTVMVAITIPEIPRVARLVRSVVLTARE 180 VDA++MRVMDGLMAIP+ILLAIAVVSLSGAS+ TVM+AITI EIPRVARLVRSVVLTARE Sbjct: 121 VDAIMMRVMDGLMAIPSILLAIAVVSLSGASVGTVMIAITIVEIPRVARLVRSVVLTARE 180 Query: 181 EPYVEAAISLGTSLPKIMWRHLMPNTIAPLIVQGTYVCASAILTEAILSFLGAGISPETP 240 EPYVEAAISLGTS+PKIMWRHLMPNTIAPLIVQGTY+CA+AILTEAILSFLGAGISPETP Sbjct: 181 EPYVEAAISLGTSMPKIMWRHLMPNTIAPLIVQGTYICAAAILTEAILSFLGAGISPETP 240 Query: 241 TWGNIMAEGRAHFQVKPSLIFWPGLLLSIAILSVNLIGDAARDALDPRMKQRE-GK 295 TWGNIMAEGR++FQ+KPSLIFWPGLLLSIAILS+NLIGDAARDALDPRMKQRE GK Sbjct: 241 TWGNIMAEGRSYFQIKPSLIFWPGLLLSIAILSINLIGDAARDALDPRMKQREAGK 296 >ref|YP_484844.1| binding-protein dependent transport system inner membrane protein [Rhodopseudomonas palustris HaA2] gb|ABD05933.1| Binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris HaA2] Length = 296 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 245/294 (83%), Positives = 280/294 (95%) Query: 1 MAIETLPESSIPVTRPFRVKFGFLTSTPIIAVATICLALIILMAIFAPLLAPHDPLLLTP 60 MAI++LPESSIP+TRPF +F FL S+PIIA A+ICLAL++ A+FAPLLAPHDP+LL P Sbjct: 1 MAIDSLPESSIPITRPFGQRFEFLYSSPIIAAASICLALVVASAVFAPLLAPHDPMLLAP 60 Query: 61 SQRLKPSSAQYLLGTDAYGRDLLSRIIYGARISLVIGLGAAVCSIGIGLLIGLVAGFFRW 120 +QRLKP+SA++LLGTDAYGRD+LSRI+YG RISL+IG+GAA+ SI IGL+IGLV+GFF+W Sbjct: 61 AQRLKPASAEFLLGTDAYGRDVLSRILYGGRISLMIGVGAAIVSIAIGLVIGLVSGFFKW 120 Query: 121 VDAVLMRVMDGLMAIPAILLAIAVVSLSGASIWTVMVAITIPEIPRVARLVRSVVLTARE 180 +DAV+MR+MDGLMAIP+ILLAIAVVSLSGAS+ TV++AITIPEIPRVARLVRSVVL+ARE Sbjct: 121 IDAVMMRLMDGLMAIPSILLAIAVVSLSGASLATVLIAITIPEIPRVARLVRSVVLSARE 180 Query: 181 EPYVEAAISLGTSLPKIMWRHLMPNTIAPLIVQGTYVCASAILTEAILSFLGAGISPETP 240 EPYVEAAISLG+SLPKIM RHL+PNTIAPLIVQGTY+CASAILTEAILSFLGAGISPETP Sbjct: 181 EPYVEAAISLGSSLPKIMVRHLLPNTIAPLIVQGTYICASAILTEAILSFLGAGISPETP 240 Query: 241 TWGNIMAEGRAHFQVKPSLIFWPGLLLSIAILSVNLIGDAARDALDPRMKQREG 294 TWGNIMAEGRA FQ+KPSLIFWPG+LLSIAILSVNLIGDAARDALDPRMKQREG Sbjct: 241 TWGNIMAEGRALFQIKPSLIFWPGVLLSIAILSVNLIGDAARDALDPRMKQREG 294 >ref|YP_571145.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] gb|ABE41244.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] Length = 296 Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust. Identities = 245/294 (83%), Positives = 278/294 (94%) Query: 1 MAIETLPESSIPVTRPFRVKFGFLTSTPIIAVATICLALIILMAIFAPLLAPHDPLLLTP 60 MAI++LPESSIP+TRP R +FGFL S+PIIA A++CLAL++ AIFAP LAPHDP LL P Sbjct: 1 MAIDSLPESSIPITRPLRPRFGFLFSSPIIAAASVCLALVVASAIFAPWLAPHDPQLLAP 60 Query: 61 SQRLKPSSAQYLLGTDAYGRDLLSRIIYGARISLVIGLGAAVCSIGIGLLIGLVAGFFRW 120 +QRLKP+SA++LLGTDAYGRD+LSRI+YG RISL+IG+GAA+ SI IGL+IGLV+GFFRW Sbjct: 61 AQRLKPASAEFLLGTDAYGRDVLSRILYGGRISLLIGVGAAIVSIAIGLVIGLVSGFFRW 120 Query: 121 VDAVLMRVMDGLMAIPAILLAIAVVSLSGASIWTVMVAITIPEIPRVARLVRSVVLTARE 180 VDAV+MR+MDGLMAIP+ILLAIAVVSLSGAS+ TV++AITIPEIPRVARLVRSVVL+ARE Sbjct: 121 VDAVMMRLMDGLMAIPSILLAIAVVSLSGASLTTVLIAITIPEIPRVARLVRSVVLSARE 180 Query: 181 EPYVEAAISLGTSLPKIMWRHLMPNTIAPLIVQGTYVCASAILTEAILSFLGAGISPETP 240 EPYVEAAISLG+SLPKIM RHLMPNT+APLIVQGTY+CASAILTEAILSFLGAGI+PETP Sbjct: 181 EPYVEAAISLGSSLPKIMVRHLMPNTVAPLIVQGTYICASAILTEAILSFLGAGINPETP 240 Query: 241 TWGNIMAEGRAHFQVKPSLIFWPGLLLSIAILSVNLIGDAARDALDPRMKQREG 294 TWGNIMAEGRA FQ+KPSLIFWPG+LLSIAILSVNLIGDAARDALDPRMKQRE Sbjct: 241 TWGNIMAEGRALFQIKPSLIFWPGVLLSIAILSVNLIGDAARDALDPRMKQREA 294