BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0152.0032.p (560 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768241.1| ABC transporter substrate-binding protein [Brad... 794 0.0 ref|YP_001238593.1| putative ABC transporter [Bradyrhizobium sp.... 596 e-168 ref|ZP_08767871.1| putative peptide ABC transporter peptide-bind... 471 e-130 gb|AAZ38132.1| putative ABC transporter substrate binding protei... 468 e-129 ref|YP_001361920.1| extracellular solute-binding protein family ... 424 e-116 >ref|NP_768241.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46866.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 562 Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/541 (69%), Positives = 452/541 (83%), Gaps = 3/541 (0%) Query: 22 KMAVTLAVLSGLSQWAPSVRAQEGVAVK--RGGVIRYGHFQEPACLFGGWVQQWYLQRQY 79 + AV +SGLS P V A+ A K GG IRYGHFQEP CL+GGWVQQWYLQRQ+ Sbjct: 23 RAAVIAIAMSGLSIADP-VHAEGASAGKPQSGGTIRYGHFQEPPCLYGGWVQQWYLQRQF 81 Query: 80 SDNLVARSDDGKIAPWLAESWTISDDKKVYTFEIKPNVKFTDGTALDAQAIADNINGWLS 139 SDNLVAR++DG+I PWLA +WTISDD+K YTF+IKP+VKFTDGT+LDAQA+ DNINGWLS Sbjct: 82 SDNLVARAEDGRILPWLATAWTISDDRKTYTFQIKPDVKFTDGTSLDAQAVVDNINGWLS 141 Query: 140 NDPDLRNPTAAPYLSDSFESAKAIAPQRLQVTLKTPFQPLLNVFAQSSQGILSPSALKRG 199 + P+L NPTA PYL FESA P ++TLKTPF+PLLNVFAQSSQGILSP+ALKRG Sbjct: 142 DSPELENPTAGPYLRGIFESAAVADPLTFKITLKTPFEPLLNVFAQSSQGILSPTALKRG 201 Query: 200 LAVNCENPVGSGPFIVDKWRHGREVTFRRNPDYNSAPATAKHQGPAHVDGISWKFLPDQT 259 AVNCE+PVGSGPFIV+KW GR V FRRNP+YNSAPATAKHQGPA+V+GI W+FL D T Sbjct: 202 KAVNCESPVGSGPFIVEKWNRGRNVIFRRNPNYNSAPATAKHQGPAYVEGIEWRFLADPT 261 Query: 260 VRYGSLITGETDAIYDIPAIAWKDANSRFGILRHITGGTPLRLALYAARPPFDDVLVRKA 319 +RYGSL+TGE+D +Y IPA+ W+DANSRF I+RH+TGGTPLRLAL++ RPPFDDV VR+A Sbjct: 262 IRYGSLLTGESDVVYHIPAVNWQDANSRFKIVRHLTGGTPLRLALFSERPPFDDVRVRQA 321 Query: 320 FAYSTDRKAAVDTSFLGSLPFEGNGALSQSSPEYLHELGRAYTYDIRQANQLLDRAGWTE 379 FAY++DR+AAV +FLGSLP+EGN ALSQSSPEY+ EL ++Y+YDI +AN+LLD AGW E Sbjct: 322 FAYASDRRAAVQAAFLGSLPYEGNFALSQSSPEYVSELSKSYSYDIEKANKLLDEAGWAE 381 Query: 380 RNRNGIRVKNGNSLTVRISYSNAFLKPDGEQALQVIQQQARVAGFDVRLQPTNPADFFAG 439 R+ NGIR KNG +L +RI+Y+NAF PDG+Q LQ+IQQQA+ AGFDVRLQPTN ADF+AG Sbjct: 382 RDANGIRSKNGKALIIRITYTNAFSPPDGDQVLQIIQQQAKAAGFDVRLQPTNQADFWAG 441 Query: 440 RNLGPDDYEIVLLYWVAPGAEIFRISWKPDQNGEPNRFNPSRFQDSALWEVIQRAEQDFS 499 +NLGP+DYE+V LYWVAPGAEI+RIS+KPD NG N FNPSR+QD LW++IQ+AEQ Sbjct: 442 KNLGPNDYEVVPLYWVAPGAEIYRISYKPDLNGVRNPFNPSRYQDLPLWDIIQKAEQAGD 501 Query: 500 SAERAGLYQQAEWKIVDEAPVIGFTVLDVTLATSPNLKDVWLDHGSVGEPVFYDAHFDER 559 A+R LYQQAE +I++ AP + +TVLDVTLA + N+KD+WLD GSVGEPVF DA+F ++ Sbjct: 502 KAQRTALYQQAERRIIENAPSLSYTVLDVTLALADNVKDIWLDSGSVGEPVFSDAYFTDK 561 Query: 560 K 560 K Sbjct: 562 K 562 >ref|YP_001238593.1| putative ABC transporter [Bradyrhizobium sp. BTAi1] gb|ABQ34687.1| Putative ABC transporter [Bradyrhizobium sp. BTAi1] Length = 553 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 289/511 (56%), Positives = 362/511 (70%), Gaps = 2/511 (0%) Query: 49 KRGGVIRYGHFQEPACLFGGWVQQWYLQRQYSDNLVARSDDGKIAPWLAESWTISDDKKV 108 KRGG+IRYGH+QEP CL+ GWVQ Y+QRQY+DNLVAR+ DG+I PWLA W+IS+D Sbjct: 44 KRGGIIRYGHYQEPPCLYAGWVQAGYIQRQYADNLVARTHDGQIVPWLATDWSISEDNLT 103 Query: 109 YTFEIKPNVKFTDGTALDAQAIADNINGWLSNDPDLRNPTAAPYLSDSFESAKAIAPQRL 168 Y F+IKP V F DGT LDA+AI N WLSNDPD N Y+ + S A P L Sbjct: 104 YVFKIKPGVTFHDGTVLDAKAIVTNFERWLSNDPDKVNRNGKLYIGEYIRSVTAPEPLTL 163 Query: 169 QVTLKTPFQPLLNVFAQSSQGILSPSALKRGLAVNCENPVGSGPFIVDKWRHGREVTFRR 228 ++ L P+QP L V + GILSP+AL+RG CE+PVGSGPF V+ W HG+ V +R Sbjct: 164 KIELARPYQPFLTVLSTYFFGILSPTALERGPKELCEHPVGSGPFAVETWNHGQNVILKR 223 Query: 229 NPDYNSAPATAKHQGPAHVDGISWKFLPDQTVRYGSLITGETDAIYDIPAIAWKDANSRF 288 NP+YNSAPATAKHQGPA+VDGI WKFL D TVRYGSL+ GE+DAIYDIPA+ W DA RF Sbjct: 224 NPNYNSAPATAKHQGPAYVDGIVWKFLKDSTVRYGSLVAGESDAIYDIPAVDWADAQKRF 283 Query: 289 GILRHITGGTPLRLALYAARPPFDDVLVRKAFAYSTDRKAAVDTSFLGSLPFEGNGALSQ 348 +++ ITGGTP RL L ARPPFDDV VR+AFAY +R+ AV+ SF GS+PF NGALS Sbjct: 284 KVIQDITGGTPTRLQLNTARPPFDDVRVRRAFAYVAERRKAVEVSFQGSIPFNANGALSI 343 Query: 349 SSPEYLHELGRAYTYDIRQANQLLDRAGWTERNRNGIRVKNGNSLTVRISYS-NAFLKPD 407 S+PE+L +L +Y YD +AN+LLD AGWT R+R+GIR K+G LTVR+ Y+ + + PD Sbjct: 344 STPEHLKDLADSYPYDPDRANRLLDDAGWTARSRDGIRTKDGKRLTVRLLYAGGSLITPD 403 Query: 408 GEQALQVIQQQARVAGFDVRLQPTNPADFFAGRNLGPDDYEIVLLYWVAPGAEIFRISWK 467 G LQ++Q QAR AGFD+ L+P AD+FAG+ G DDYE YWVA AEI +ISW+ Sbjct: 404 GVSVLQILQDQARSAGFDIVLKPIPQADWFAGKGRGIDDYEAQPAYWVASSAEILKISWR 463 Query: 468 PDQNGEPNRFNPSRFQDSALWEVIQRAEQDFSSAERAGLYQQAEWKIVDEAPVIGFTVLD 527 PDQNG N N SRFQ LW +I+ A++ F R LY+ A+ IVD A V+G L Sbjct: 464 PDQNGVINANNASRFQPPELWTLIEEADRTFDDKVRLRLYEDAQRVIVDNAAVVGLFPLT 523 Query: 528 VTLATSPNLKDVWLDHGSVGEPVFYDAHFDE 558 V++A+ P LKD+W+ V EPVF+DA+F++ Sbjct: 524 VSIASQPKLKDIWI-SSRVSEPVFHDAYFEK 553 >ref|ZP_08767871.1| putative peptide ABC transporter peptide-binding protein [Gordonia alkanivorans NBRC 16433] dbj|GAA14797.1| putative peptide ABC transporter peptide-binding protein [Gordonia alkanivorans NBRC 16433] Length = 555 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 241/507 (47%), Positives = 314/507 (61%), Gaps = 5/507 (0%) Query: 51 GGVIRYGHFQEPACLFGGWVQQWYLQRQYSDNLVARSDDGKIAPWLAESWTISDDKKVYT 110 GGVI YGH QEP C+ GGWVQ YL RQY DNLV+ D+G PWLA SW IS D+K YT Sbjct: 51 GGVIEYGHEQEPPCIHGGWVQNAYLARQYLDNLVSLDDNGTPVPWLATSWEISPDRKTYT 110 Query: 111 FEIKPNVKFTDGTALDAQAIADNINGWLSNDPDLRNPTAAPYLSDSFESAKAIAPQRLQV 170 F +KP+VKF+DGT LDA A+ N + +L DPD N T Y+ + + + + Sbjct: 111 FRLKPDVKFSDGTDLDATAVKTNFDKYL--DPDAPNGTVMAYIGQYYAGGEVLDRNTYAL 168 Query: 171 TLKTPFQPLLNVFAQSSQGILSPSALKRGLAVNCENPVGSGPFIVDKWRHGREVTFRRNP 230 LK P+ PLL V Q GI SP+AL RG NC PVGSGPFI+++W R +TF RNP Sbjct: 169 HLKRPYSPLLTVLTQGYFGIQSPTALARGKKENCSKPVGSGPFIIERWDRNRSITFVRNP 228 Query: 231 DYNSAPATAKHQGPAHVDGISWKFLPDQTVRYGSLITGETDAIYDIPAIAWKDANSRFGI 290 DYNSAPA AKHQGPA+VD + WKFL D +RYGSL +G +D IY++PAI W DA +RF Sbjct: 229 DYNSAPANAKHQGPAYVDKVIWKFLKDPVLRYGSLTSGSSDVIYNVPAINWADATTRFQT 288 Query: 291 LRHITGGTPLRLALYAARPPFDDVLVRKAFAYSTDRKAAVDTSFLGSLPFEGNGALSQSS 350 +++T G P + L PFDDV VR+AFAYS DR+ AV+T+FLG +PF NGALSQS+ Sbjct: 289 KQYVTPGRPNAITLNVDHAPFDDVRVRQAFAYSADREKAVETAFLGVVPFNSNGALSQST 348 Query: 351 PEYLHELGRAYTYDIRQANQLLDRAGWTERNRNGIRVKNGNSLTVRISY-SNAFLKPDGE 409 P+Y G AY D +AN LLD+AGWT R+ +GIR K+G L R+ Y ++A + P+G Sbjct: 349 PDYDPAAG-AYARDPAKANALLDQAGWTARDSDGIRTKDGRRLIARVVYAADAIVGPEGA 407 Query: 410 QALQVIQQQARVAGFDVRLQPTNPADFFAGRNLGPDDYEIVLLYWVAPGAEIFRISWKPD 469 LQ I QAR GFD+ L P +++F G Y+ + YW +P + I+W+ Sbjct: 408 AILQNIAYQARDVGFDIELVPATQSEYFGGNYAKAPTYDAYVGYWTSPTPGLLHINWRQR 467 Query: 470 QNGEPNRFNPSRFQDSALWEVIQRAEQDFSSAERAGLYQQAEWKIVDEAPVIGFTVLDVT 529 PN N + + D L I++A AE+ Y +A+ I D+A IG + Sbjct: 468 LEDSPNPHNTAYYNDPILQGFIEKANSSADPAEQREFYSKAQKLIGDQALSIGLYTQTTS 527 Query: 530 LATSPNLKDVWLDHGSVGEPVFYDAHF 556 +A +P L DVW++ S GEPVF DA F Sbjct: 528 IAANPKLHDVWVEK-SQGEPVFADARF 553 >gb|AAZ38132.1| putative ABC transporter substrate binding protein [Arthrobacter sp. KW] Length = 551 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 228/508 (44%), Positives = 329/508 (64%), Gaps = 7/508 (1%) Query: 51 GGVIRYGHFQEPACLFGGWVQQWYLQRQYSDNLVARSDDGKIAPWLAESWTISDDKKVYT 110 GG +RY + QEP C++GGWVQQ YL RQ D+LV++ DG I PWLA+SW +SDD+ +T Sbjct: 47 GGTLRYANLQEPPCVYGGWVQQAYLSRQVLDSLVSQEPDGTIVPWLAQSWKVSDDQLTWT 106 Query: 111 FEIKPNVKFTDGTALDAQAIADNINGWLSNDPDLRNPTAAPYLSDSFESAKAIAPQRLQV 170 F +K VKFTDGT L+AQA++DN N W+ D N T Y+ D ++S++A+ P L+V Sbjct: 107 FTLKDGVKFTDGTTLNAQAVSDNFNYWV----DGGNGTVTAYIGDYYQSSRAVDPLTLEV 162 Query: 171 TLKTPFQPLLNVFAQSSQGILSPSALK-RGLAVNCENPVGSGPFIVDKWRHGREVTFRRN 229 LK P+ PLL+ Q GI SP+AL R NCE P+GSGPF V +W+ G +T +N Sbjct: 163 KLKAPYSPLLSALGQGYFGIQSPTALSGRTKQQNCEAPIGSGPFTVGQWKRGESITLNKN 222 Query: 230 PDYNSAPATAKHQGPAHVDGISWKFLPDQTVRYGSLITGETDAIYDIPAIAWKDANSRFG 289 YNSAPA AKHQGPA VD + W F+ D T R+G+L +GE DAI ++P + + A S+F Sbjct: 223 AAYNSAPANAKHQGPAFVDSVVWSFVQDNTSRFGALASGEADAIGEVPTVNFDAAKSQFQ 282 Query: 290 ILRHITGGTPLRLALYAARPPFDDVLVRKAFAYSTDRKAAVDTSFLGSLPFEGNGALSQS 349 + ++IT G P+ L+L + PF D VR+AFAYS+DRKAAV+++FLG +PFEGNG + QS Sbjct: 283 VEQYITPGRPVTLSLNTVQGPFADAKVRQAFAYSSDRKAAVESAFLGVVPFEGNGTVGQS 342 Query: 350 SPEYLHELGRAYTYDIRQANQLLDRAGWTERNRNGIRVKNGNSLTVRISYS-NAFLKPDG 408 +P Y ++ Y +D +AN+LLD AGW+ RN G+RVK+G L V+I + N+ + +G Sbjct: 343 TPGYNKDVADDYPFDQAKANKLLDEAGWSTRNSTGVRVKDGKELEVKIVFGLNSIVTTEG 402 Query: 409 EQALQVIQQQARVAGFDVRLQPTNPADFFAGRNLGPDDYEIVLLYWVAPGAEIFRISWKP 468 ALQ +Q+Q + GF + L P AD F+G PD Y+ L YW +P + I I+++ Sbjct: 403 ATALQNLQEQVKPTGFKMTLLPVTQADLFSGAYSTPDKYDASLGYWTSPTSGILYINFRQ 462 Query: 469 DQNGEPNRFNPSRFQDSALWEVIQRAEQDFSSAERAGLYQQAEWKIVDEAPVIGFTVLDV 528 + +PN N + + ++ + +I +A ++ + Y QA+ ++ DEA +G Sbjct: 463 NTKEKPNYANSTFYNNAEIEGLILKANSAKTTEDANEYYAQAQQRLSDEAVAVGLYTQTA 522 Query: 529 TLATSPNLKDVWLDHGSVGEPVFYDAHF 556 ++A+ P LKDVWL+ S GEPVF+DA+F Sbjct: 523 SIASQPALKDVWLE-ASQGEPVFHDAYF 549 >ref|YP_001361920.1| extracellular solute-binding protein family 5 [Kineococcus radiotolerans SRS30216] gb|ABS03656.1| extracellular solute-binding protein family 5 [Kineococcus radiotolerans SRS30216] Length = 544 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/531 (44%), Positives = 311/531 (58%), Gaps = 8/531 (1%) Query: 29 VLSGLSQWAPSVRAQEGVAVKRGGVIRYGHFQEPACLFGGWVQQWYLQRQYSDNLVARSD 88 +L+G + A + ++ G GG I YGH QEPAC+FGGW++Q YL Q D L + Sbjct: 17 LLTGCAGSAAAPQSAPGARPVSGGTIVYGHQQEPACVFGGWIEQAYLSTQVLDALTSLDA 76 Query: 89 DGKIAPWLAESWTISDDKKVYTFEIKPNVKFTDGTALDAQAIADNINGWLSNDPDLRNPT 148 D ++ PWLA SW S D +TF +K VKFTDGT L A +A NI+ W+ N T Sbjct: 77 DREVVPWLATSWQTSPDGLTWTFHLKDGVKFTDGTDLTAAVVAYNIDHWMGGG----NST 132 Query: 149 AAPYLSDSFESAKAIAPQRLQVTLKTPFQPLLNVFAQSSQGILSPSALK-RGLAVNCENP 207 A +L ++ + A+ LQ+ L P+ L + AQ GI S AL+ R NCE P Sbjct: 133 AKVWLDGYYDHSTAVDEHTLQIHLAKPYPRLADNLAQGYSGIQSQHALETRTAEQNCEQP 192 Query: 208 VGSGPFIVDKWRHGREVTFRRNPDYNSAPATAKHQGPAHVDGISWKFLPDQTVRYGSLIT 267 +GSG F+VD W G ++ +RN Y S PA AKH GPAHV+ I WKF+ D T R SL + Sbjct: 193 IGSGAFVVDHWDRGEQIVLKRNEQYTSPPANAKHTGPAHVEQIDWKFIADATTRVASLRS 252 Query: 268 GETDAIYDIPAIAWKDANSR-FGILRHITGGTPLRLALYAARPPFDDVLVRKAFAYSTDR 326 GETDAIYD+PAI + + + L+++TGG P +LA + PF D VRKAFAYS DR Sbjct: 253 GETDAIYDVPAIDYAGLGADGYTELKYVTGGRPQQLAFNTQQGPFTDERVRKAFAYSLDR 312 Query: 327 KAAVDTSFLGSLPFEGNGALSQSSPEYLHELGRAYTYDIRQANQLLDRAGWTERNRNGIR 386 KA V+T G +P+EGNGA+SQS+P Y AY+ D+ +ANQLLD AGWT R+ +G R Sbjct: 313 KALVETIGQGVIPYEGNGAVSQSTPGYSQAAADAYSLDLTRANQLLDEAGWTGRDTDGTR 372 Query: 387 VKNGNSLTVRISY-SNAFLKPDGEQALQVIQQQARVAGFDVRLQPTNPADFFAGRNLGPD 445 K+G L+V + Y S + DG LQ +Q+QA+ +GF V L P+ FF+G PD Sbjct: 373 TKDGERLSVVLPYNSGTIINADGASILQGVQEQAKASGFAVDLVTVPPSGFFSGLYTKPD 432 Query: 446 DYEIVLLYWVAPGAEIFRISWKPDQNGEPNRFNPSRFQDSALWEVIQRAEQDFSSAERAG 505 + +I YW A A I I+W+P PN N + D+ L ++I RA Q + Sbjct: 433 ERDIAAGYWTAVTAGILWINWRPVSEEWPNGNNAAFTTDAFLGDLIDRANQTADVQAQNA 492 Query: 506 LYQQAEWKIVDEAPVIGFTVLDVTLATSPNLKDVWLDHGSVGEPVFYDAHF 556 LY QA+ I D A IG TLA +P+LKDVW ++ G PVFYDAHF Sbjct: 493 LYAQAQDYIADHALSIGLYDRLSTLAVTPSLKDVWQENAQ-GGPVFYDAHF 542