BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0152.0018.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001243469.1| plasmid stability protein [Bradyrhizobium sp...   229   1e-58
ref|YP_570265.1| PilT protein-like protein [Rhodopseudomonas pal...   220   5e-56
ref|YP_001264372.1| PilT domain-containing protein [Sphingomonas...   218   3e-55
ref|YP_485948.1| PilT protein-like [Rhodopseudomonas palustris H...   217   4e-55
ref|YP_001526755.1| plasmid stabilization protein [Azorhizobium ...   215   2e-54

>ref|YP_001243469.1| plasmid stability protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ39563.1| plasmid stability protein [Bradyrhizobium sp. BTAi1]
          Length = 140

 Score =  229 bits (583), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/138 (84%), Positives = 128/138 (92%)

Query: 1   VILLDTNVVSEAMKPEPHPSVRHWLDAQAAETVFLSSVTVAELLFGIGALPRGRRKDRLA 60
           +ILLDTNVVSEAMKPEPHPSVR WLDAQAAET+FLSSVT+AEL+FGIGALPRG+RKDRLA
Sbjct: 1   MILLDTNVVSEAMKPEPHPSVRDWLDAQAAETLFLSSVTIAELMFGIGALPRGKRKDRLA 60

Query: 61  VALDGVLDLFTARILPFDTAAARRYAELAVKARAAGKGFPTPDGYIAAIAAAHGFAVASR 120
             LDGV++LF  R+LPFDT AARRYA+LAVKAR AGKGFPTPDGYIAAIAAAHGFAVASR
Sbjct: 61  TTLDGVMELFKPRVLPFDTQAARRYADLAVKARKAGKGFPTPDGYIAAIAAAHGFAVASR 120

Query: 121 DTSAFNAAGLTIIDPWTA 138
            T+AF AAGLT+IDPWT 
Sbjct: 121 HTAAFAAAGLTVIDPWTG 138


>ref|YP_570265.1| PilT protein-like protein [Rhodopseudomonas palustris BisB5]
 gb|ABE40364.1| PilT protein-like [Rhodopseudomonas palustris BisB5]
          Length = 140

 Score =  220 bits (561), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 116/139 (83%), Positives = 126/139 (90%)

Query: 1   VILLDTNVVSEAMKPEPHPSVRHWLDAQAAETVFLSSVTVAELLFGIGALPRGRRKDRLA 60
           +I+LDTNVVSEAM  EPHP VR WLDAQ+AET+FLSS+TVAELLFGIGALP G+RK+ L 
Sbjct: 1   MIVLDTNVVSEAMTREPHPRVREWLDAQSAETLFLSSITVAELLFGIGALPAGKRKNALG 60

Query: 61  VALDGVLDLFTARILPFDTAAARRYAELAVKARAAGKGFPTPDGYIAAIAAAHGFAVASR 120
            ALD VLDLF ARILPFDT AAR YA+LAVKARAAGKGFPTPDGYIAAIAAAHGFAVASR
Sbjct: 61  AALDDVLDLFAARILPFDTPAARHYADLAVKARAAGKGFPTPDGYIAAIAAAHGFAVASR 120

Query: 121 DTSAFNAAGLTIIDPWTAT 139
           D SAFNAAGLT+IDPWTA+
Sbjct: 121 DASAFNAAGLTVIDPWTAS 139


>ref|YP_001264372.1| PilT domain-containing protein [Sphingomonas wittichii RW1]
 gb|ABQ70234.1| PilT protein domain protein [Sphingomonas wittichii RW1]
          Length = 142

 Score =  218 bits (554), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/138 (76%), Positives = 122/138 (88%)

Query: 1   VILLDTNVVSEAMKPEPHPSVRHWLDAQAAETVFLSSVTVAELLFGIGALPRGRRKDRLA 60
           +I+LDTNVVSEAMKPEP+P V  WLD QAAET++LSSVT+AELLFGIGALP GRRKDRLA
Sbjct: 1   MIVLDTNVVSEAMKPEPNPDVCAWLDEQAAETLYLSSVTIAELLFGIGALPDGRRKDRLA 60

Query: 61  VALDGVLDLFTARILPFDTAAARRYAELAVKARAAGKGFPTPDGYIAAIAAAHGFAVASR 120
           VALDG+L+LF  RILPFD AAAR YA+ AV+AR+AGKGFPTPDGYIAAIA + GF VA+R
Sbjct: 61  VALDGLLELFDGRILPFDMAAARHYADRAVRARSAGKGFPTPDGYIAAIAVSRGFVVATR 120

Query: 121 DTSAFNAAGLTIIDPWTA 138
           D SAF+AAG+ +IDPW A
Sbjct: 121 DASAFDAAGIAVIDPWKA 138


>ref|YP_485948.1| PilT protein-like [Rhodopseudomonas palustris HaA2]
 gb|ABD07037.1| PilT protein-like [Rhodopseudomonas palustris HaA2]
          Length = 140

 Score =  217 bits (553), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 107/139 (76%), Positives = 123/139 (88%)

Query: 1   VILLDTNVVSEAMKPEPHPSVRHWLDAQAAETVFLSSVTVAELLFGIGALPRGRRKDRLA 60
           +ILLDTNVVSEA+KP PHPSV  WLD QAAET+FLSS+TVAELLFG+GA+P G+RK+ LA
Sbjct: 1   MILLDTNVVSEAIKPGPHPSVLAWLDVQAAETLFLSSITVAELLFGVGAMPDGKRKNLLA 60

Query: 61  VALDGVLDLFTARILPFDTAAARRYAELAVKARAAGKGFPTPDGYIAAIAAAHGFAVASR 120
           V +DG+LD F  R+L FD  AAR YA+LAVKARA GKGFPTPDGYIAAIAAAHGF+VASR
Sbjct: 61  VRIDGLLDQFDRRVLHFDIPAARCYADLAVKARAVGKGFPTPDGYIAAIAAAHGFSVASR 120

Query: 121 DTSAFNAAGLTIIDPWTAT 139
           D SAF+AAGLT+IDPWTA+
Sbjct: 121 DASAFDAAGLTVIDPWTAS 139


>ref|YP_001526755.1| plasmid stabilization protein [Azorhizobium caulinodans ORS 571]
 dbj|BAF89837.1| plasmid stabilization protein [Azorhizobium caulinodans ORS 571]
          Length = 140

 Score =  215 bits (547), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 121/137 (88%)

Query: 1   VILLDTNVVSEAMKPEPHPSVRHWLDAQAAETVFLSSVTVAELLFGIGALPRGRRKDRLA 60
           +ILLDTNV+SEAMKP P  +VR WLD QAAET++LSSVT+AELL+GIGALP G+RKDRL 
Sbjct: 1   MILLDTNVISEAMKPAPEDNVRAWLDEQAAETLYLSSVTIAELLYGIGALPAGKRKDRLT 60

Query: 61  VALDGVLDLFTARILPFDTAAARRYAELAVKARAAGKGFPTPDGYIAAIAAAHGFAVASR 120
            ALDGV++LF  R+LPFD AAARRYA+LAV+AR AGKGFPTPDGYIAAIAA+ GF VA+R
Sbjct: 61  EALDGVMELFADRVLPFDVAAARRYADLAVQARTAGKGFPTPDGYIAAIAASRGFTVATR 120

Query: 121 DTSAFNAAGLTIIDPWT 137
           DTSAF+AAG+ +I+PW 
Sbjct: 121 DTSAFDAAGVVVINPWN 137