BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0152.0013.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60847.1|AF322012_152 ID331 [Bradyrhizobium japonicum]           175   2e-42
ref|NP_768504.1| citrate-proton symporter [Bradyrhizobium japoni...   175   2e-42
ref|ZP_08209553.1| general substrate transporter [Novosphingobiu...    92   2e-17
ref|YP_004227125.1| major facilitator superfamily protein [Burkh...    82   2e-14
ref|YP_497370.1| general substrate transporter [Novosphingobium ...    81   6e-14

>gb|AAG60847.1|AF322012_152 ID331 [Bradyrhizobium japonicum]
          Length = 461

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 109/127 (85%)

Query: 1   MIWPQIAALLMTYPVFFWISESRSALALLGGLGALTMIGTIPYSAFYVSMAEGLPKNIRG 60
           MIWPQ AALLM YPVF WI+ESRSA ALLGGLG LT+IGT+PYSAFYVSMAE LP+NIRG
Sbjct: 326 MIWPQAAALLMIYPVFLWIAESRSAFALLGGLGTLTLIGTVPYSAFYVSMAESLPRNIRG 385

Query: 61  GAFATTYAFAIAIFGGTAQPIVTWLIHLTGSALAPAWYMLVASAAGLCAMLLIPETAPLK 120
           GAF TTYAFAI IFGGTAQ +VTWLI+LTGSALAPAWYML ASAAGL AM+++PETAPL 
Sbjct: 386 GAFGTTYAFAIGIFGGTAQLVVTWLIYLTGSALAPAWYMLFASAAGLFAMVMMPETAPLN 445

Query: 121 IRSAALR 127
                 R
Sbjct: 446 FERNHRR 452


>ref|NP_768504.1| citrate-proton symporter [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47129.1| citrate-proton symporter [Bradyrhizobium japonicum USDA 110]
          Length = 463

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 109/127 (85%)

Query: 1   MIWPQIAALLMTYPVFFWISESRSALALLGGLGALTMIGTIPYSAFYVSMAEGLPKNIRG 60
           MIWPQ AALLM YPVF WI+ESRSA ALLGGLG LT+IGT+PYSAFYVSMAE LP+NIRG
Sbjct: 328 MIWPQAAALLMIYPVFLWIAESRSAFALLGGLGTLTLIGTVPYSAFYVSMAESLPRNIRG 387

Query: 61  GAFATTYAFAIAIFGGTAQPIVTWLIHLTGSALAPAWYMLVASAAGLCAMLLIPETAPLK 120
           GAF TTYAFAI IFGGTAQ +VTWLI+LTGSALAPAWYML ASAAGL AM+++PETAPL 
Sbjct: 388 GAFGTTYAFAIGIFGGTAQLVVTWLIYLTGSALAPAWYMLFASAAGLFAMVMMPETAPLN 447

Query: 121 IRSAALR 127
                 R
Sbjct: 448 FERNHRR 454


>ref|ZP_08209553.1| general substrate transporter [Novosphingobium nitrogenifigens DSM
           19370]
 gb|EGD58804.1| general substrate transporter [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 441

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 76/127 (59%)

Query: 1   MIWPQIAALLMTYPVFFWISESRSALALLGGLGALTMIGTIPYSAFYVSMAEGLPKNIRG 60
           MIWPQ+A L++  P+F W   + +    +     L+ +GT+P+SA + S++E +P+ +R 
Sbjct: 304 MIWPQLAFLILIMPLFSWFLAAPTPAGFMVVNVILSGLGTMPFSAAFTSVSESMPRKMRS 363

Query: 61  GAFATTYAFAIAIFGGTAQPIVTWLIHLTGSALAPAWYMLVASAAGLCAMLLIPETAPLK 120
            AFA  Y   + + G T Q ++TWL+ +TG  +  AWY+   +  GL AM L+PE+AP  
Sbjct: 364 RAFAVVYTIPVMVMGSTTQLVLTWLLKITGQPIVLAWYLAAIAVVGLVAMALMPESAPHC 423

Query: 121 IRSAALR 127
           IR  + +
Sbjct: 424 IRRQSSK 430


>ref|YP_004227125.1| major facilitator superfamily protein [Burkholderia sp. CCGE1001]
 gb|ADX54065.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1001]
          Length = 424

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 8/116 (6%)

Query: 5   QIAALLMTYPVFFWISESRSALALLGGLGALTM----IGTIPYSAFYVSMAEGLPKNIRG 60
           ++  + + YP F W+      L ++ GL  L M    +G+ P    Y  M E  PK +R 
Sbjct: 307 RVVLIALLYPAF-WLMNQFPTLPVVTGLIVLLMFFYTMGSAPA---YALMPENFPKRVRA 362

Query: 61  GAFATTYAFAIAIFGGTAQPIVTWLIHLTGSALAPAWYMLVASAAGLCAMLLIPET 116
           G  A+ YA A+++FGGTAQ +V WLI +TG+ +APAWYM+V     LCA+ ++ ET
Sbjct: 363 GYLASAYAVAVSVFGGTAQLVVAWLIKVTGNTMAPAWYMIVCVIISLCAVTMLEET 418


>ref|YP_497370.1| general substrate transporter [Novosphingobium aromaticivorans DSM
           12444]
 gb|ABD26536.1| General substrate transporter [Novosphingobium aromaticivorans DSM
           12444]
          Length = 424

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%)

Query: 14  PVFFWISESRSALALLGGLGALTMIGTIPYSAFYVSMAEGLPKNIRGGAFATTYAFAIAI 73
           P + W++ +  A   +    AL    T+P  A Y ++AE LPK  R   FA  YA  +  
Sbjct: 312 PAYVWLTSAHDAFVFIAVNTALAFCSTVPSGAVYAAIAESLPKASRAKTFALVYALPVTF 371

Query: 74  FGGTAQPIVTWLIHLTGSALAPAWYMLVASAAGLCAMLLIPETAPLKIRSA 124
            GG+ Q ++TWL+ +TG  +A AWYML A+   L  M+L+ E+AP ++R++
Sbjct: 372 LGGSTQFVITWLLKVTGEPMAVAWYMLGAALLALAGMVLVRESAPSRLRAS 422