BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0152.0008.p (441 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004557624.1| transposase IS66 [Sinorhizobium meliloti AK8... 414 e-113 ref|YP_001371283.1| transposase IS66 [Ochrobactrum anthropi ATCC... 400 e-109 ref|YP_001372857.1| transposase IS66 [Ochrobactrum anthropi ATCC... 400 e-109 ref|YP_223439.1| IS66 family element, orf3 [Brucella abortus bv.... 397 e-108 ref|NP_699741.1| IS66 family orf3 [Brucella suis 1330] >gi|23463... 397 e-108 >ref|YP_004557624.1| transposase IS66 [Sinorhizobium meliloti AK83] gb|AEG56744.1| transposase IS66 [Sinorhizobium meliloti AK83] Length = 524 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 229/514 (44%), Positives = 311/514 (60%), Gaps = 85/514 (16%) Query: 1 MAIRPDALPTDAAALTEMVLALDAENEKLRVAMQTLKEMIFGKRSERLVAIVAEQLALEL 60 M +RP LP DAA LT ++L+LD EN L+ + L+ +FG +SE++ AI A Q L+L Sbjct: 1 MPLRPTPLPQDAAQLTRIILSLDEENADLKARVAFLEGQLFGPKSEKMTAIDATQATLDL 60 Query: 61 DDLATGVTPPASANDDL-PATKPAGKPRKKARRNIGALPKHLPRCEQVLEPDTTACPCCQ 119 DL+ PA+ANDD+ P T+ R+ RNIG LPKHLPR E+V+EP++ +CPCC Sbjct: 61 GDLSD---IPAAANDDVAPVTEGTTPARRSPARNIGRLPKHLPRHEEVIEPESKSCPCCS 117 Query: 120 GALHRIGEDVSEVLDVIPAILRVLRTVRPKYACRGCTDGVVQAKVLPRLVEGGMASTALV 179 LH IG DVSE LD++PA++RV RT+RP+YACR C VVQA R+++GGM +TA Sbjct: 118 FDLHCIGTDVSEALDIVPAVVRVKRTIRPRYACRACESVVVQAPAPARVMDGGMVTTAFA 177 Query: 180 AHVVVSKFAWYLPLYRQVQILAGQGIHLDRATLAGWVKRAAWWLKSLYELQLRTIQASPR 239 AHV VSKFAW+LPL+RQ Q+LA G+ +DR TL WV R AWWL+ LY+ I++ PR Sbjct: 178 AHVAVSKFAWHLPLHRQAQMLASCGVVIDRGTLGAWVTRIAWWLELLYDALTAFIRSQPR 237 Query: 240 LFCDETXVCR-------------WPRHRGDR-------RAIDRLLRHSAGXRK------- 272 +FCDET + R W + DR A+ + S R+ Sbjct: 238 VFCDETPLPRLDPGRKRTKLCQSWAQAIDDRPWNGPAPPAVAYIFAESRSAREVEGQLSS 297 Query: 273 FVEV--------YKTMQ--------SP------FAH------------------EVIERL 292 FV V YKTM +P FAH ++ R+ Sbjct: 298 FVGVLQVDGYQAYKTMAKRRGKSNVAPMRLAFCFAHARRKFVDVVKLTGSSEALSILARI 357 Query: 293 QAVYAIEAEXR--------------AAPLMEVLKARLSSMLDQLFSQSKLAEAINYTLNH 338 +Y IEA+ R AAP+M LKA+L+ + D++ ++S L +A+ YTLNH Sbjct: 358 AEIYRIEAKIRGESADTRLRVRRREAAPIMSELKAQLTELSDEVSAKSALGKAVTYTLNH 417 Query: 339 WDGLTLFLRDGRVEVDSNTVERSMRPIAMGRRNSLFSGSESGAESWAILASLVNTAKLHE 398 W+GL FL DGR+EVDSN VERSM+ +A+ R+NSLF GS G E++A+LASL+NTAKL+ Sbjct: 418 WNGLAAFLEDGRIEVDSNVVERSMKSVALTRKNSLFVGSARGGETFAVLASLINTAKLNG 477 Query: 399 LDPQVYLADVLERIISGQTKSHQLRELLAWNWKA 432 +DP+V+LADVLERIISG+ K++++ LL W WKA Sbjct: 478 VDPEVWLADVLERIISGKVKANRMESLLPWAWKA 511 >ref|YP_001371283.1| transposase IS66 [Ochrobactrum anthropi ATCC 49188] gb|ABS15454.1| transposase IS66 [Ochrobactrum anthropi ATCC 49188] Length = 524 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 221/517 (42%), Positives = 303/517 (58%), Gaps = 91/517 (17%) Query: 1 MAIRPDALPTDAAALTEMVLALDAENEKLRVAMQTLKEMIFGKRSERLVAIVAEQLALEL 60 M +RPD LP DAA LT ++L+LD EN L+ + L+ +FG +SE++ I Q L+L Sbjct: 1 MLLRPDPLPQDAAQLTRIILSLDEENADLKARVAFLERQLFGTKSEKMTIIDPAQATLDL 60 Query: 61 DDLATGVTPPASANDDLPATKPAGKPRKKARR----NIGALPKHLPRCEQVLEPDTTACP 116 DL+ P +ANDD P G+ + +ARR NIG LPKHLPR E+++EP++ CP Sbjct: 61 GDLSD---IPVAANDD---AAPVGEDKTQARRSPARNIGRLPKHLPRHEEIIEPESKICP 114 Query: 117 CCQGALHRIGEDVSEVLDVIPAILRVLRTVRPKYACRGCTDGVVQAKVLPRLVEGGMAST 176 CC LH IG DVSE LD++PA++RV RT+RP+YACR C +VQA R+++GGM +T Sbjct: 115 CCSFELHCIGTDVSEALDIVPAVVRVKRTIRPRYACRACESAIVQAPAPARVMDGGMVTT 174 Query: 177 ALVAHVVVSKFAWYLPLYRQVQILAGQGIHLDRATLAGWVKRAAWWLKSLYELQLRTIQA 236 A AHV VSKFAW+LPL RQ Q+LA G+ +DR TL WV R AWWL+ LY+ I++ Sbjct: 175 AFAAHVAVSKFAWHLPLNRQAQMLASCGVIIDRGTLGAWVMRVAWWLELLYDALTAFIRS 234 Query: 237 SPRLFCDE------------TXVCR-WPRHRGDR-------RAIDRLLRHSAGXRKF--- 273 PR+FCDE T VC+ W + DR A+ + S R+ Sbjct: 235 QPRVFCDETPLPRLEPGRKRTKVCQLWAQAVDDRPWNGPAPPAVAYIFTESRSAREIEGQ 294 Query: 274 ------------VEVYKTM--------------------------------QSPFAHEVI 289 + YKTM S A ++ Sbjct: 295 LSSFTGVLQVDGYQAYKTMVKRRGKSNVAPMRLAFCLAHARRKFVDVVKLTGSSEALSIL 354 Query: 290 ERLQAVYAIEAEXR--------------AAPLMEVLKARLSSMLDQLFSQSKLAEAINYT 335 R+ +Y IEA+ R AAP+M LKA L+ + D++ ++S L +A++YT Sbjct: 355 ARIAEIYRIEAKLRGESADTRLVVRRREAAPVMRELKAHLTELRDEVSAKSALGKAVSYT 414 Query: 336 LNHWDGLTLFLRDGRVEVDSNTVERSMRPIAMGRRNSLFSGSESGAESWAILASLVNTAK 395 LNHW GLT L DGR+EVDSN VERSM+ +A+ R+NSLF G+E G +++A+LASLVNT K Sbjct: 415 LNHWSGLTACLDDGRIEVDSNVVERSMKSVALTRKNSLFVGNERGGKTFAVLASLVNTCK 474 Query: 396 LHELDPQVYLADVLERIISGQTKSHQLRELLAWNWKA 432 L+ +DP+V+LADVLERIISG+ K++++ LL W WKA Sbjct: 475 LNGVDPEVWLADVLERIISGKVKANEMESLLPWAWKA 511 >ref|YP_001372857.1| transposase IS66 [Ochrobactrum anthropi ATCC 49188] ref|YP_001373285.1| transposase IS66 [Ochrobactrum anthropi ATCC 49188] gb|ABS17028.1| transposase IS66 [Ochrobactrum anthropi ATCC 49188] gb|ABS17456.1| transposase IS66 [Ochrobactrum anthropi ATCC 49188] Length = 524 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/517 (43%), Positives = 300/517 (58%), Gaps = 91/517 (17%) Query: 1 MAIRPDALPTDAAALTEMVLALDAENEKLRVAMQTLKEMIFGKRSERLVAIVAEQLALEL 60 M +RPD LP DAA LT ++L+LD EN L+ + L+ +FG +SE++ I Q L+L Sbjct: 1 MLLRPDPLPQDAAQLTRIILSLDEENADLKARVAFLERQLFGTKSEKMTIIDPAQATLDL 60 Query: 61 DDLATGVTPPASANDDLPATKPAGKPRKKARR----NIGALPKHLPRCEQVLEPDTTACP 116 DL+ P +ANDD P G+ + +ARR NIG LPKHLPR E+++EP++ CP Sbjct: 61 GDLSD---IPVAANDD---AAPVGEDKTQARRSPARNIGRLPKHLPRHEEIIEPESKICP 114 Query: 117 CCQGALHRIGEDVSEVLDVIPAILRVLRTVRPKYACRGCTDGVVQAKVLPRLVEGGMAST 176 CC LH IG DVSE LD++PA++RV RT+RP+YACR C +VQA R+++GGM +T Sbjct: 115 CCSFELHCIGTDVSEALDIVPAVVRVKRTIRPRYACRACESAIVQAPAPARVMDGGMVTT 174 Query: 177 ALVAHVVVSKFAWYLPLYRQVQILAGQGIHLDRATLAGWVKRAAWWLKSLYELQLRTIQA 236 A AHV VSKFAW+LPL RQ Q+LA G+ +DR TL WV R AWWL+ LY+ I++ Sbjct: 175 AFAAHVAVSKFAWHLPLNRQAQMLASCGVSIDRGTLGTWVTRVAWWLELLYDTLTVFIRS 234 Query: 237 SPRLFCDE------------TXVCR-WPRHRGDR--------------------RAIDRL 263 PR+FCDE T VC+ W + DR R I+ Sbjct: 235 QPRVFCDETPLPQLDPGRKRTKVCQLWAQAVDDRPWNGPAPPAVAYIFAESRSAREIEGQ 294 Query: 264 LRHSAGXRKF--VEVYKTM--------------------------------QSPFAHEVI 289 L G + + YKTM S A V+ Sbjct: 295 LSSFTGVLQVDGYQAYKTMVKRRGKSNVAPMRLAFCLAHARRKFVDVVKLTGSSEALSVL 354 Query: 290 ERLQAVYAIEAEXR--------------AAPLMEVLKARLSSMLDQLFSQSKLAEAINYT 335 R+ +Y IEA+ R AAP+M LKA L+ + +++ ++S L +AI YT Sbjct: 355 ARVAEIYRIEAKLRGESADTRLVVRRREAAPVMRELKAHLTELREEVSAKSALGKAIGYT 414 Query: 336 LNHWDGLTLFLRDGRVEVDSNTVERSMRPIAMGRRNSLFSGSESGAESWAILASLVNTAK 395 LNHW GLT FL DGRVEVDSN VERSM+ +A+ R+NSLF G+E G +S+A++ASLVNT K Sbjct: 415 LNHWSGLTAFLDDGRVEVDSNVVERSMKSVALTRKNSLFVGNERGGKSFAVIASLVNTCK 474 Query: 396 LHELDPQVYLADVLERIISGQTKSHQLRELLAWNWKA 432 L+ +DP+ +LADVLERII G+ K+ ++ LL W WKA Sbjct: 475 LNGVDPETWLADVLERIICGKVKATEMESLLPWTWKA 511 >ref|YP_223439.1| IS66 family element, orf3 [Brucella abortus bv. 1 str. 9-941] ref|ZP_05869028.1| transposase [Brucella abortus bv. 6 str. 870] ref|ZP_05872459.1| transposase [Brucella abortus bv. 4 str. 292] ref|ZP_05894111.1| Y4jD [Brucella abortus bv. 9 str. C68] ref|ZP_05930290.1| transposase [Brucella abortus bv. 3 str. Tulya] ref|ZP_06933328.1| transposase [Brucella abortus bv. 5 str. B3196] gb|AAX76078.1| hypothetical IS66 family element, orf3 [Brucella abortus bv. 1 str. 9-941] gb|EEX57369.1| transposase [Brucella abortus bv. 4 str. 292] gb|EEX63609.1| transposase [Brucella abortus bv. 6 str. 870] gb|EEX79094.1| Y4jD [Brucella abortus bv. 9 str. C68] gb|EEX84477.1| transposase [Brucella abortus bv. 3 str. Tulya] gb|EFH32860.1| transposase [Brucella abortus bv. 5 str. B3196] Length = 523 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/514 (44%), Positives = 292/514 (56%), Gaps = 86/514 (16%) Query: 1 MAIRPDALPTDAAALTEMVLALDAENEKLRVAMQTLKEMIFGKRSERLVAIVAEQLALEL 60 M R LP D L M+L DAE E+L+V ++ FG+RSE+L +V +Q+ L+L Sbjct: 1 MLNRGQHLPRDPDILVGMILERDAEIERLKVLLKAANAKPFGQRSEQLAHMVEKQIRLDL 60 Query: 61 DDLATGVTPP----ASANDDLPATKPAGKPRKKARRNIGALPKHLPRCEQVLEPDTTACP 116 D+ V P AS LP + RRNIGALP+HL R +V+EP + C Sbjct: 61 GDV---VHEPEVASASEGAGLPKMPRQASAHSRPRRNIGALPEHLERVVEVIEPSSLECA 117 Query: 117 CCQGALHRIGEDVSEVLDVIPAILRVLRTVRPKYACRGCTDGVVQAKVLPRLVEGGMAST 176 CCQG LH IGED SEVL PA L VLRTVRPKYACR C G+VQAK PRL +GG+A+T Sbjct: 118 CCQGKLHCIGEDESEVLASRPATLYVLRTVRPKYACRACEAGIVQAKAKPRLFDGGLATT 177 Query: 177 ALVAHVVVSKFAWYLPLYRQVQILAGQGIHLDRATLAGWVKRAAWWLKSLYELQLRTIQA 236 +++++VVV ++AWYLPL RQVQ+L GQG+ LD +TL WVKR+AWWLKSLY+ L I + Sbjct: 178 SMISNVVVWRYAWYLPLNRQVQMLKGQGVRLDTSTLCSWVKRSAWWLKSLYDKLLAYIHS 237 Query: 237 SPRLFCDE------------TXVCRWPRH----------------------RGDRRAIDR 262 R+F DE T +C++ H RG + Sbjct: 238 HSRVFVDETRMPVLKRDRTRTKICQFWAHAVDDRPWNGPAYPAVAYVFAQGRGKTEIQSQ 297 Query: 263 LLRHSA-------------------------------GXRKFVEVYKTMQSPFAHEVIER 291 L+R+S RKFV+V+K +S A VIER Sbjct: 298 LVRYSGILQVDAYKAYKSLTRPDRRAGSIALAYCLAHARRKFVDVFKKYKSELAKVVIER 357 Query: 292 LQAVYAIEAEXRAAP--------------LMEVLKARLSSMLDQLFSQSKLAEAINYTLN 337 L VYAIEA R+ LM LK L L + ++ +A AI YTL Sbjct: 358 LAEVYAIEASIRSTSAEHRLGVRQAKSKVLMADLKMLLMDTLKDISAKDPVASAIKYTLG 417 Query: 338 HWDGLTLFLRDGRVEVDSNTVERSMRPIAMGRRNSLFSGSESGAESWAILASLVNTAKLH 397 HW GLTLFL DGR+EVDSNTVER+MR +A+GR NSLF+GS+ GAE+WAIL SL+ TAKL+ Sbjct: 418 HWAGLTLFLEDGRLEVDSNTVERNMRSVALGRVNSLFAGSDGGAETWAILGSLLTTAKLN 477 Query: 398 ELDPQVYLADVLERIISGQTKSHQLRELLAWNWK 431 LDP +L DVLERI+SG+ KS L L W+WK Sbjct: 478 GLDPYTWLNDVLERIVSGEIKSTSLWRCLPWHWK 511 >ref|NP_699741.1| IS66 family orf3 [Brucella suis 1330] gb|AAN33746.1| IS66 family element, orf3, putative [Brucella suis 1330] gb|AEM20023.1| IS66 family orf3 [Brucella suis 1330] Length = 523 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/514 (44%), Positives = 292/514 (56%), Gaps = 86/514 (16%) Query: 1 MAIRPDALPTDAAALTEMVLALDAENEKLRVAMQTLKEMIFGKRSERLVAIVAEQLALEL 60 M R LP D L M+L DAE E+L+V ++ FG+RSE+L +V Q+ L+L Sbjct: 1 MLNRGQHLPRDPDILVGMILERDAEIERLKVLLKAANAKPFGQRSEQLAHMVERQIRLDL 60 Query: 61 DDLATGVTPP----ASANDDLPATKPAGKPRKKARRNIGALPKHLPRCEQVLEPDTTACP 116 D+ V P AS LP + RRNIGALP+HL R +V+EP + C Sbjct: 61 GDV---VHEPEVASASEGAGLPKMPRQASAHSRPRRNIGALPEHLERVVEVIEPSSLECA 117 Query: 117 CCQGALHRIGEDVSEVLDVIPAILRVLRTVRPKYACRGCTDGVVQAKVLPRLVEGGMAST 176 CCQG LH IGED SEVL PA L VLRTVRPKYACR C G+VQAK PRL +GG+A+T Sbjct: 118 CCQGKLHCIGEDESEVLASRPATLYVLRTVRPKYACRACEAGIVQAKAKPRLFDGGLATT 177 Query: 177 ALVAHVVVSKFAWYLPLYRQVQILAGQGIHLDRATLAGWVKRAAWWLKSLYELQLRTIQA 236 +++++VVV ++AWYLPL RQVQ+L GQG+ LD +TL WVKR+AWWLKSLY+ L I + Sbjct: 178 SMISNVVVWRYAWYLPLNRQVQMLKGQGVRLDTSTLCSWVKRSAWWLKSLYDKLLAYIHS 237 Query: 237 SPRLFCDE------------TXVCRWPRH----------------------RGDRRAIDR 262 R+F DE T +C++ H RG + Sbjct: 238 HSRVFVDETRMPVLKRDRTRTKICQFWAHAVDDRPWNGPAYPAVAYVFAQGRGKTEIQSQ 297 Query: 263 LLRHSA-------------------------------GXRKFVEVYKTMQSPFAHEVIER 291 L+R+S RKFV+V+K +S A VIER Sbjct: 298 LVRYSGILQVDAYKAYKSLTRPDRRAGSIALAYCLAHARRKFVDVFKKYKSELAKVVIER 357 Query: 292 LQAVYAIEAEXRAAP--------------LMEVLKARLSSMLDQLFSQSKLAEAINYTLN 337 L VYAIEA R+ LM LK L L + ++ +A AI YTL Sbjct: 358 LAEVYAIEASIRSTSAEHRLGVRQAKSKVLMADLKMLLMDTLKDISAKDPVASAIKYTLG 417 Query: 338 HWDGLTLFLRDGRVEVDSNTVERSMRPIAMGRRNSLFSGSESGAESWAILASLVNTAKLH 397 HW GLTLFL DGR+EVDSNTVER+MR +A+GR NSLF+GS+ GAE+WAIL+SL+ TAKL+ Sbjct: 418 HWAGLTLFLEDGRLEVDSNTVERNMRSVALGRVNSLFAGSDGGAETWAILSSLLTTAKLN 477 Query: 398 ELDPQVYLADVLERIISGQTKSHQLRELLAWNWK 431 LDP +L DVLERI+SG+ KS L L W+WK Sbjct: 478 GLDPYTWLNDVLERIVSGEIKSTSLWRCLPWHWK 511