BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0149.0007.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772563.1| UDP-glucose 4-epimerase [Bradyrhizobium japonic... 400 e-109 ref|YP_318993.1| NAD-dependent epimerase/dehydratase [Nitrobacte... 266 2e-69 ref|YP_545385.1| NAD-dependent epimerase/dehydratase [Methylobac... 234 1e-59 ref|YP_959875.1| NAD-dependent epimerase/dehydratase [Marinobact... 231 1e-58 ref|YP_001748286.1| NAD-dependent epimerase/dehydratase [Pseudom... 228 1e-57 >ref|NP_772563.1| UDP-glucose 4-epimerase [Bradyrhizobium japonicum USDA 110] dbj|BAC51188.1| bll5923 [Bradyrhizobium japonicum USDA 110] Length = 315 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/315 (63%), Positives = 244/315 (77%), Gaps = 2/315 (0%) Query: 1 MNNGHRTVLVTGASGFVGRHVVPALARSGWVVRRAVRTPPRDANDVMIGSLSPATDWRAA 60 M+ VLVTGASGFVG HVVPALAR GW VRRAVR P ++V+I ++ P TDW+AA Sbjct: 1 MSERKPVVLVTGASGFVGGHVVPALARQGWSVRRAVRRPTGADDEVVIETIGPETDWQAA 60 Query: 61 LDGVEAVVHLAARVHQQSDERAIELYRNVNIEGTLHLARSAVAAGIRDFIFVSTILVHGR 120 L+GV+AVVHLAARVH + +E A++LYRNVNI GTLHLA SA AG+R FIFVST+LVHGR Sbjct: 61 LEGVDAVVHLAARVHHKHEEHAVQLYRNVNIAGTLHLAHSAATAGVRQFIFVSTVLVHGR 120 Query: 121 SNYGRLPFREDDVLTPRGLYGNSKAAAEVGLKEIVPGSGMRVTVIRPPLIYGAGAKGNFA 180 SN GR PF E D+LTPRGLYG SKAAAE GL+ + S + ++VIRPPL+YGAGAKGNFA Sbjct: 121 SNEGRAPFSEKDILTPRGLYGMSKAAAEAGLRTLARDSAINISVIRPPLVYGAGAKGNFA 180 Query: 181 LLKRAVLNGLPLPLAYVKNRRAFLSAENLASFILHRLSH--PGDDFDVFLVADREQVSTR 238 LL RAV GLPLP A + N RAFL+ +NL+SFIL RL+H P +F++FLVAD+EQVST Sbjct: 181 LLTRAVSLGLPLPFAAIHNHRAFLAVQNLSSFILRRLAHPDPASNFEIFLVADKEQVSTP 240 Query: 239 EFVERLARAADTSPRLFWLPPLLLKMALGISGRKEAYDSLFASLELDLSKIAGTGWQQPI 298 EF+ERLA+A+ SPRLF +PP LL L + GR++ +DSL SLELD+SK TGW+ + Sbjct: 241 EFIERLAKASGKSPRLFGMPPDLLGTLLRVIGRQDTHDSLIGSLELDISKAIATGWEPQV 300 Query: 299 SLDEGLRRALRQTDS 313 SLDEGL+ AL D+ Sbjct: 301 SLDEGLQLALSVQDA 315 >ref|YP_318993.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi Nb-255] gb|ABA05641.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi Nb-255] Length = 321 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 148/313 (47%), Positives = 200/313 (63%), Gaps = 6/313 (1%) Query: 5 HRTVLVTGASGFVGRHVVPALARSGWVVRRAVRTP----PRDANDVMIGSLSPATDWRAA 60 HRT L+TG +GF+G +V AL GW VR A+R P P V++G L ATDW A Sbjct: 6 HRTALLTGITGFLGPYVAAALRADGWSVRAALRRPIGDLPACDGSVLVGDLGGATDWTDA 65 Query: 61 LDGVEAVVHLAARVHQQSDERAIE--LYRNVNIEGTLHLARSAVAAGIRDFIFVSTILVH 118 L G++AVVHLA R H+ + E LY N GT+HLA++A AAG+R+F+F+S+I V+ Sbjct: 66 LVGIDAVVHLAGRAHRPPAVQLAEQDLYFETNTAGTIHLAQAAAAAGVRNFVFISSIAVN 125 Query: 119 GRSNYGRLPFREDDVLTPRGLYGNSKAAAEVGLKEIVPGSGMRVTVIRPPLIYGAGAKGN 178 G S GR PFRE D P+ +YG +KAAAE GL E+ +GM VT IRPP+IYGA AKG+ Sbjct: 126 GVSTDGRAPFRESDAPAPQSIYGRTKAAAEDGLGEVAVKTGMAVTAIRPPMIYGANAKGS 185 Query: 179 FALLKRAVLNGLPLPLAYVKNRRAFLSAENLASFILHRLSHPGDDFDVFLVADREQVSTR 238 F +L RAV +PLP ++NRRAF++AEN+ASFI RL PG + ++V+D EQ+ST Sbjct: 186 FRILSRAVTAHVPLPFGMIRNRRAFVAAENVASFISFRLERPGHGMETYIVSDEEQISTA 245 Query: 239 EFVERLARAADTSPRLFWLPPLLLKMALGISGRKEAYDSLFASLELDLSKIAGTGWQQPI 298 EF R+ RA + L +P L L ++G +S+ SL +D KI +GW+ + Sbjct: 246 EFSRRIGRALGRNVLLLPVPEKALGFVLRVAGATHLIESILHSLVVDTGKIDRSGWRPAV 305 Query: 299 SLDEGLRRALRQT 311 SLD+GL AL +T Sbjct: 306 SLDQGLLLALGKT 318 >ref|YP_545385.1| NAD-dependent epimerase/dehydratase [Methylobacillus flagellatus KT] gb|ABE49544.1| NAD-dependent epimerase/dehydratase [Methylobacillus flagellatus KT] Length = 313 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 133/306 (43%), Positives = 184/306 (60%), Gaps = 5/306 (1%) Query: 8 VLVTGASGFVGRHVVPALARSGWVVRRAVR--TPPRDANDVMIGSLSPATDWRAALDGVE 65 +LVTGA+GFVG+ + AL R + V+ R T DA + S+ TDW LDG+ Sbjct: 4 LLVTGATGFVGKTLCSALRRQSFPVKAIGRAGTIRADALGDQVASIDGQTDWSLILDGIN 63 Query: 66 AVVHLAARVHQQSDERAIEL--YRNVNIEGTLHLARSAVAAGIRDFIFVSTILVHGRSNY 123 AV+HLAARVH ++ A L YR N+EGTL+LAR A AG++ F+F+S+I V+G Sbjct: 64 AVIHLAARVHVMREQLADPLAAYRETNVEGTLNLARQAAKAGVKRFVFISSIKVNGEQTL 123 Query: 124 GRLPFREDDVLTPRGLYGNSKAAAEVGLKEIVPGSGMRVTVIRPPLIYGAGAKGNFALLK 183 PF DV P YG SK AE GL + +GM V VIRPPL+YG G KGNFA + Sbjct: 124 PGKPFTAYDVPAPEDAYGISKFEAEQGLLALARETGMDVVVIRPPLVYGPGVKGNFASMM 183 Query: 184 RAVLNGLPLPLAYVKNRRAFLSAENLASFILHRLSHPGDDFDVFLVADREQVSTREFVER 243 + V +G+PLPL + N+R+ ++ +NL + I+ + HP VFLV+D E +ST + + R Sbjct: 184 KLVKSGIPLPLGAIHNQRSLVAIDNLVNLIVTCIDHPAAANQVFLVSDGEDLSTSDLLRR 243 Query: 244 LARAADTSPRLFWLPPLLLKMALGISGRKEAYDSLFASLELDLSKIAG-TGWQQPISLDE 302 LA+AA S RL + L+M L + G++ L SL++D+SK GW PIS+DE Sbjct: 244 LAKAAGVSSRLMPVSARWLEMGLRMCGKRLIAQRLLGSLQVDISKTRELLGWVPPISVDE 303 Query: 303 GLRRAL 308 GL+R Sbjct: 304 GLKRCF 309 >ref|YP_959875.1| NAD-dependent epimerase/dehydratase [Marinobacter aquaeolei VT8] gb|ABM19688.1| NAD-dependent epimerase/dehydratase [Marinobacter aquaeolei VT8] Length = 315 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 135/308 (43%), Positives = 176/308 (57%), Gaps = 6/308 (1%) Query: 8 VLVTGASGFVGRHVVPALARSG-WVVRRAVRTP--PRDANDVMIGSLSPATDWRAALDGV 64 VLVTGA+GFVG + L RS + + AVRT R + IG L P TDW AAL G Sbjct: 3 VLVTGANGFVGSRLAGQLGRSDHFSLACAVRTTGTCRFGEEYSIGELGPKTDWSAALRGQ 62 Query: 65 EAVVHLAARVHQQSDERAIEL--YRNVNIEGTLHLARSAVAAGIRDFIFVSTILVHGRSN 122 + VVHLAAR H DE L YR VN++GTL+LAR A+ AG+R F+FVS+I V+G Sbjct: 63 DVVVHLAARAHVMDDEAPDPLVEYRRVNVDGTLNLARQAIDAGVRRFVFVSSIKVNGEQT 122 Query: 123 YGRLPFREDDVLTPRGLYGNSKAAAEVGLKEIVPGSGMRVTVIRPPLIYGAGAKGNFALL 182 PF D + P YG SK AE GL + SGM V +IRPPL+YG G KGNFA L Sbjct: 123 DLGQPFTSDQITAPADAYGISKLEAERGLLALGKESGMEVVIIRPPLVYGPGVKGNFATL 182 Query: 183 KRAVLNGLPLPLAYVKNRRAFLSAENLASFILHRLSHPGDDFDVFLVADREQVSTREFVE 242 + V G PLPL + N+R +S +NL I + HP +VFL D +ST E + Sbjct: 183 IKLVEKGFPLPLGAISNKRTLVSLDNLVDLIQVCIDHPAAANEVFLAGDNSDLSTSELLR 242 Query: 243 RLARAADTSPRLFWLPPLLLKMALGISGRKEAYDSLFASLELDLSKIAG-TGWQQPISLD 301 + +A RL +P L +A + G+ + LF SL++D+SK GW+ P+S++ Sbjct: 243 EIGKAVGKPARLIPVPQGFLMVAARLLGKTDVARRLFGSLQVDISKARHLLGWEPPVSVE 302 Query: 302 EGLRRALR 309 EGLRR Sbjct: 303 EGLRRCFE 310 >ref|YP_001748286.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619] gb|ACA71917.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619] Length = 322 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 132/306 (43%), Positives = 179/306 (58%), Gaps = 7/306 (2%) Query: 6 RTVLVTGASGFVGRHVVPALARSG-WVVRRAVR---TPPRDANDVMIGSLSPATDWRAAL 61 +T+LVTGASGFVG + LA G + R A+R T P D V +G L+ TDWR AL Sbjct: 4 QTILVTGASGFVGSALCRRLASIGVYAPRAALRHAGTGPADIPAVTVGDLAATTDWREAL 63 Query: 62 DGVEAVVHLAARVHQQSDERAIEL--YRNVNIEGTLHLARSAVAAGIRDFIFVSTILVHG 119 GV+AVVH AARVH + A L +R VN+EGTL+LAR A AAG+R F+F+S++ V+G Sbjct: 64 AGVDAVVHAAARVHVMKETAADSLAAFRRVNVEGTLNLARQAAAAGVRRFVFISSVKVNG 123 Query: 120 RSNYGRLPFREDDVLTPRGLYGNSKAAAEVGLKEIVPGSGMRVTVIRPPLIYGAGAKGNF 179 ++ P R DD P YG SK AE L ++ +GM V +IRP L+YG G K NF Sbjct: 124 EASIAGRPLRADDAAMPLDAYGISKHEAEQALCQLAVATGMEVVIIRPVLVYGPGVKANF 183 Query: 180 ALLKRAVLNGLPLPLAYVKNRRAFLSAENLASFILHRLSHPGDDFDVFLVADREQVSTRE 239 + R V G+PLPL V NRR+ +S +NL ++ + HP F+ +D E VS E Sbjct: 184 HSMMRWVQRGVPLPLGAVDNRRSLVSVQNLVDLVVTCIDHPQARNQTFMASDGEDVSLSE 243 Query: 240 FVERLARAADTSPRLFWLPPLLLKMALGISGRKEAYDSLFASLELDLSKIAG-TGWQQPI 298 + L RA RL +PP LL+ A + GR + L SL++D++K GW+ P Sbjct: 244 LLRALGRALGRPARLLPVPPALLQRAANLLGRHDLAQRLLGSLQVDIAKNQQLLGWRPPF 303 Query: 299 SLDEGL 304 +L +GL Sbjct: 304 TLQQGL 309