BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0148.0001.p (320 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773327.1| phosphoglycerate dehydrogenase [Bradyrhizobium ... 532 e-149 ref|YP_001242079.1| putative phosphoglycerate dehydrogenase (PGD... 517 e-145 ref|YP_001207626.1| putative phosphoglycerate dehydrogenase (PGD... 485 e-135 ref|ZP_08631027.1| D-3-phosphoglycerate dehydrogenase [Bradyrhiz... 425 e-117 ref|ZP_06054709.1| D-3-phosphoglycerate dehydrogenase [alpha pro... 323 2e-86 >ref|NP_773327.1| phosphoglycerate dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC51952.1| blr6687 [Bradyrhizobium japonicum USDA 110] Length = 320 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 250/320 (78%), Positives = 283/320 (88%) Query: 1 MTRLRCAILDDYFDIALSVADWPKVKDRVDVTVFDKPFASEAEAATKLKDFEVICAMRER 60 MTRLRCAILDDYF+IAL VADWPK+ DR+DVTVF PF SE AA+ L DFE++CAMRER Sbjct: 1 MTRLRCAILDDYFNIALDVADWPKLSDRIDVTVFSHPFTSEQAAASALADFEIVCAMRER 60 Query: 61 TPFPKSLLDALPRLQLLITSGMRNAAIDMEAAKSRKAVLCGTQYGRDPTAPLTMGLILEL 120 T FPKSL D+LP+L+LL+TSGMRNA+IDMEAAK++ + GTQY RDPTAPLTMGLILEL Sbjct: 61 TAFPKSLFDSLPKLKLLLTSGMRNASIDMEAAKAKGVAIGGTQYSRDPTAPLTMGLILEL 120 Query: 121 TRGIGRENARMHAGEAWQTFAGTEIEGKTLGIIGLGKLGSKVAGMAKVFGMNVIAWSPNL 180 TRGIGRENARMHAGE WQTFAG EIEG TLGI+GLGKLGSK+AG+AK FGMNVIAWSPNL Sbjct: 121 TRGIGRENARMHAGEPWQTFAGVEIEGLTLGIVGLGKLGSKMAGIAKAFGMNVIAWSPNL 180 Query: 181 TPEKCKEAGVGYASKDELFATSDIITIHVVLSPRSRGLVGAADLARMKPSAYLVNTARGP 240 TPEKCK AGVGYA+K+ELFA +DI+TIHVVLS RSRGLVGAADLARMKP+A+LVNTARGP Sbjct: 181 TPEKCKAAGVGYATKEELFAKADIVTIHVVLSERSRGLVGAADLARMKPTAFLVNTARGP 240 Query: 241 IVDEDALFAALRDKTIAGAGIDVFSVEPLPSDHPLRKLDNVVITPHLGYATRESLQAHYQ 300 IVDE AL AL+ + IAGAG+DVFSVEPLP DHP RKLDN+V+TPHLGYAT + L+ HY Sbjct: 241 IVDEQALLEALQQRKIAGAGLDVFSVEPLPVDHPFRKLDNLVLTPHLGYATEDGLRIHYG 300 Query: 301 QMVECIDAFTKGNEPPRRLA 320 QMVE IDA+T+G E PR+LA Sbjct: 301 QMVEAIDAWTRGGELPRKLA 320 >ref|YP_001242079.1| putative phosphoglycerate dehydrogenase (PGDH), serA-like protein [Bradyrhizobium sp. BTAi1] gb|ABQ38173.1| putative Phosphoglycerate dehydrogenase (PGDH), serA-like protein [Bradyrhizobium sp. BTAi1] Length = 320 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 245/320 (76%), Positives = 277/320 (86%) Query: 1 MTRLRCAILDDYFDIALSVADWPKVKDRVDVTVFDKPFASEAEAATKLKDFEVICAMRER 60 MTRLRCAILDDY+D AL++ADW ++ D+VDVT F PF SE AA L D E++CAMRER Sbjct: 1 MTRLRCAILDDYYDKALALADWRRLADKVDVTAFTHPFGSEDAAAGALADIEIVCAMRER 60 Query: 61 TPFPKSLLDALPRLQLLITSGMRNAAIDMEAAKSRKAVLCGTQYGRDPTAPLTMGLILEL 120 TPFP++L++ LP+L+LLITSGMRNAAIDM+AAK R V+CGTQYGRDPTAPLTMGLILEL Sbjct: 61 TPFPRALIERLPKLKLLITSGMRNAAIDMDAAKGRSIVVCGTQYGRDPTAPLTMGLILEL 120 Query: 121 TRGIGRENARMHAGEAWQTFAGTEIEGKTLGIIGLGKLGSKVAGMAKVFGMNVIAWSPNL 180 TR IG+ENARMHAG AWQ G EIEGKTLGI+GLGKLGSKVAG+AK FGMNV+AWSPNL Sbjct: 121 TRKIGQENARMHAGAAWQALGGVEIEGKTLGIVGLGKLGSKVAGLAKAFGMNVMAWSPNL 180 Query: 181 TPEKCKEAGVGYASKDELFATSDIITIHVVLSPRSRGLVGAADLARMKPSAYLVNTARGP 240 TPE+C+EAGVGYA+K+ LFAT+DIITIHVVLS RSRGLVGAAD+ARMKPSAYLVNT+R P Sbjct: 181 TPERCQEAGVGYATKEALFATADIITIHVVLSDRSRGLVGAADIARMKPSAYLVNTSRAP 240 Query: 241 IVDEDALFAALRDKTIAGAGIDVFSVEPLPSDHPLRKLDNVVITPHLGYATRESLQAHYQ 300 IVDE AL ALRDK IAGA +DVF+VEPLP HPLR LDNVV+TPHLGY T ES +AHY Sbjct: 241 IVDEAALLQALRDKRIAGAALDVFTVEPLPVPHPLRGLDNVVLTPHLGYVTEESFRAHYS 300 Query: 301 QMVECIDAFTKGNEPPRRLA 320 QMVECI A+ G EPPRRLA Sbjct: 301 QMVECIAAWLGGAEPPRRLA 320 >ref|YP_001207626.1| putative phosphoglycerate dehydrogenase (PGDH), serA-like [Bradyrhizobium sp. ORS 278] emb|CAL79409.1| putative Phosphoglycerate dehydrogenase (PGDH), serA-like [Bradyrhizobium sp. ORS 278] Length = 320 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 249/320 (77%), Positives = 276/320 (86%) Query: 1 MTRLRCAILDDYFDIALSVADWPKVKDRVDVTVFDKPFASEAEAATKLKDFEVICAMRER 60 MTRLRCAILDDY+D ALS+ADWP + DRVDVT F PFA E AA L D +++CAMRER Sbjct: 1 MTRLRCAILDDYYDTALSLADWPGLSDRVDVTAFTHPFADEDAAAAALADVDIVCAMRER 60 Query: 61 TPFPKSLLDALPRLQLLITSGMRNAAIDMEAAKSRKAVLCGTQYGRDPTAPLTMGLILEL 120 TPFP+ L++ LP+L+LLITSGMRNAAID EAAKSR VLCGTQYGRDPTAPLTMGLILEL Sbjct: 61 TPFPRGLIERLPKLKLLITSGMRNAAIDSEAAKSRGIVLCGTQYGRDPTAPLTMGLILEL 120 Query: 121 TRGIGRENARMHAGEAWQTFAGTEIEGKTLGIIGLGKLGSKVAGMAKVFGMNVIAWSPNL 180 TR IG+ENARMHAGE WQ G EIEG+TLGI+GLGKLG+KVAG+AK FGMNVIAWSPNL Sbjct: 121 TRKIGQENARMHAGEPWQALGGIEIEGRTLGILGLGKLGTKVAGLAKAFGMNVIAWSPNL 180 Query: 181 TPEKCKEAGVGYASKDELFATSDIITIHVVLSPRSRGLVGAADLARMKPSAYLVNTARGP 240 TPE+CK+AGVGYA KDELFA +DIITIHVVLS RSRGLVGAAD+ARMKPSAYLVNT+R P Sbjct: 181 TPERCKDAGVGYAGKDELFAAADIITIHVVLSDRSRGLVGAADIARMKPSAYLVNTSRAP 240 Query: 241 IVDEDALFAALRDKTIAGAGIDVFSVEPLPSDHPLRKLDNVVITPHLGYATRESLQAHYQ 300 IVDE AL AL+DK IAGAG+DVFSVEPLP HPLR+LDNVV+TPHLGY T ES +AHY Sbjct: 241 IVDEVALLQALKDKRIAGAGLDVFSVEPLPVTHPLRRLDNVVLTPHLGYVTEESFRAHYG 300 Query: 301 QMVECIDAFTKGNEPPRRLA 320 QMV CI A+ G EPPRRLA Sbjct: 301 QMVACIAAWLDGAEPPRRLA 320 >ref|ZP_08631027.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06327.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] Length = 318 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 204/314 (64%), Positives = 248/314 (78%), Gaps = 1/314 (0%) Query: 4 LRCAILDDYFDIALSVADWPKVKDRVDVTVFDKPFASEAEAATKLKDFEVICAMRERTPF 63 LRCAILDDY ++AL ADW ++KDR+D+TVFD+PFAS+ EA L+DF ++CAMRERTPF Sbjct: 3 LRCAILDDYQNVALQFADWSQLKDRIDITVFDQPFASQDEAIRALQDFAIVCAMRERTPF 62 Query: 64 PKSLLDALPRLQLLITSGMRNAAIDMEAAKSRKAVLCGTQYGRDPTAPLTMGLILELTRG 123 P+ +L ALP+L+LL+TSGMRNA+ D+EAAK +CGT + TA L +GL+LELTR Sbjct: 63 PREVLTALPKLKLLLTSGMRNASFDLEAAKESGITVCGTGGVGNATASLAIGLMLELTRR 122 Query: 124 IGRENARMHAGEAWQTFAGTEIEGKTLGIIGLGKLGSKVAGMAKVFGMNVIAWSPNLTPE 183 IG ENARMHAGE WQT G ++EG TLG++GLGKLG+KVA +AK GM VIAWS NLTPE Sbjct: 123 IGFENARMHAGELWQTTMGQDVEGMTLGVVGLGKLGTKVAAIAKALGMTVIAWSQNLTPE 182 Query: 184 KCKEAGVGYASKDELFATSDIITIHVVLSPRSRGLVGAADLARMKPSAYLVNTARGPIVD 243 C AGV YASKDELFAT+DI+TIH +LS R+RGLV DLARMKP++YLVNTARGPIVD Sbjct: 183 ACAAAGVTYASKDELFATADIVTIHTILSKRTRGLVTRDDLARMKPTSYLVNTARGPIVD 242 Query: 244 EDALFAALRDKTIAGAGIDVFSVEPLPSDHPLRKLDNVVITPHLGYATRESLQAHYQQMV 303 E AL AL+ K IAGAG+D FS+EPLP D PLRKLDNVV+TPHLGY T + + +Y +V Sbjct: 243 EAALLDALQRKAIAGAGLDTFSIEPLPVDDPLRKLDNVVLTPHLGYVTETNYRKYYGDIV 302 Query: 304 ECIDAFTKGNEPPR 317 E I A+ G +P R Sbjct: 303 EDIAAWLDG-QPVR 315 >ref|ZP_06054709.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium HIMB114] gb|EEY74478.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium HIMB114] Length = 315 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 154/316 (48%), Positives = 218/316 (68%), Gaps = 2/316 (0%) Query: 4 LRCAILDDYFDIALSVADWPKVKDRVDVTVFDKPFASEAEAATKLKDFEVICAMRERTPF 63 ++ AILDDY IA + DW + ++ DV VF++PF +E A LKDFE + MRERTP Sbjct: 1 MKVAILDDYQAIADQLVDWSRFENSCDVKVFNQPFENEEHAIENLKDFEALLIMRERTPI 60 Query: 64 PKSLLDALPRLQLLITSGMRNAAIDMEAAKSRKAVLCGTQYGRDPTAPLTMGLILELTRG 123 + L+D P+L+ + TSGMRN ID++ AKS+ ++ G++ ++PTA LT LIL L+R Sbjct: 61 TEKLIDGCPKLKFIATSGMRNLGIDLDYAKSKGIIVSGSEGNKNPTAELTWALILGLSRN 120 Query: 124 IGRENARMHAGEAWQTFAGTEIEGKTLGIIGLGKLGSKVAGMAKVFGMNVIAWSPNLTPE 183 + +E+ M+ G WQT G E++GKTLGI+GLGKLG VA + K FGM++IAWS NL Sbjct: 121 LKQESENMYQG-YWQTTIGFELKGKTLGIMGLGKLGCMVAKVGKAFGMDIIAWSENLKMS 179 Query: 184 KCKEAGVGYASKDELFATSDIITIHVVLSPRSRGLVGAADLARMKPSAYLVNTARGPIVD 243 +E G +KDELF SD ++IH +LS RS+ LV DLA+MK +A+++NT+RGPI++ Sbjct: 180 HAEENGALAVTKDELFEKSDFLSIHYLLSERSKNLVKYEDLAKMKKTAFIINTSRGPIIN 239 Query: 244 EDALFAALRDKTIAGAGIDVFSVEPLPSDHPLRKLDNVVITPHLGYATRESLQAHYQQMV 303 ED L AL+++ IAGAG+DV+++EPLP +H LR L NV++TPH+GY T ++ Y QM Sbjct: 240 EDDLIKALQEEIIAGAGLDVYNIEPLPENHKLRFLPNVLLTPHIGYVTVDNYMKWYTQMA 299 Query: 304 ECIDAFTKGNEPPRRL 319 E + AF G+ P R L Sbjct: 300 EDLQAFIDGS-PIRVL 314