BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0146.0057.p         (147 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001203203.1| putative signal peptide [Bradyrhizobium sp. ...   171   3e-41
ref|ZP_08628425.1| hypothetical protein CSIRO_1500 [Bradyrhizobi...   165   2e-39
ref|YP_571589.1| hypothetical protein Nham_4112 [Nitrobacter ham...   150   6e-35
ref|ZP_07025465.1| conserved hypothetical protein [Afipia sp. 1N...   150   9e-35
ref|YP_578757.1| hypothetical protein Nham_3568 [Nitrobacter ham...   147   6e-34

>ref|YP_001203203.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL74966.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS 278]
          Length = 147

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 86/147 (58%), Positives = 113/147 (76%), Gaps = 3/147 (2%)

Query: 1   MLQRLINDVKDATGKALRLTSLAAAAAIALFITIAFLCAAAFIYVLQHYGPVEACLAGAA 60
           M QR+I DVK++TG  +RLTSLA AAAI LF+T  FLCAAAF+ VLQHYGPV ACL GAA
Sbjct: 1   MFQRIIADVKESTGHTVRLTSLALAAAIGLFVTTCFLCAAAFVAVLQHYGPVAACLTGAA 60

Query: 61  LFLVVTLIAASVYIVRKREMRR---RAEKAAKAAAANVFADPVVVATGLQIVRAIGAKRL 117
           +F +VTLIAA  Y++RKR + +   RA + A++AA ++ ADP+++A+GLQ+VR +G KRL
Sbjct: 61  IFFLVTLIAAISYMIRKRSVAKHAPRATETARSAAQSLLADPMLLASGLQVVRMVGVKRL 120

Query: 118 IPIVAVGGFALGLMASCSAASSSEADE 144
           IPI+AVGG ALGL+A    +  +E  E
Sbjct: 121 IPILAVGGLALGLLARQQMSEEAEPAE 147


>ref|ZP_08628425.1| hypothetical protein CSIRO_1500 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08928.1| hypothetical protein CSIRO_1500 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 145

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/146 (55%), Positives = 111/146 (76%), Gaps = 1/146 (0%)

Query: 1   MLQRLINDVKDATGKALRLTSLAAAAAIALFITIAFLCAAAFIYVLQHYGPVEACLAGAA 60
           MLQ+ ++D +++TG ALRLTSLA A A+ LFIT  FLCAAAF++VL+ YG ++AC AGA 
Sbjct: 1   MLQKFMDDFRESTGSALRLTSLAVAVAVLLFITTCFLCAAAFVFVLEKYGLLQACFAGAG 60

Query: 61  LFLVVTLIAASVYIVRKREMRRRAEKAAKAAAANVFADPVVVATGLQIVRAIGAKRLIPI 120
           +F + T++AA  Y+VRKR++++R  +AAK+      +DP+V+A GLQIVR IG KR+IPI
Sbjct: 61  VFFIATMLAAIAYMVRKRQIKKRPVEAAKSTMQAALSDPMVLAAGLQIVRTIGLKRIIPI 120

Query: 121 VAVGGFALGLMASCSAASSSEADEEE 146
           VA+GG ALG+MAS   A  +E D EE
Sbjct: 121 VAIGGIALGVMASRRQA-EAEPDPEE 145


>ref|YP_571589.1| hypothetical protein Nham_4112 [Nitrobacter hamburgensis X14]
 gb|ABE64757.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 147

 Score =  150 bits (379), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 95/120 (79%)

Query: 1   MLQRLINDVKDATGKALRLTSLAAAAAIALFITIAFLCAAAFIYVLQHYGPVEACLAGAA 60
           M QR I+D K++ G ALRLTSLA  A IA F+TI FLCAAAF++V Q+YG +EACL GAA
Sbjct: 1   MFQRAIDDFKESAGNALRLTSLAGVAVIAGFVTILFLCAAAFVFVFQNYGLIEACLTGAA 60

Query: 61  LFLVVTLIAASVYIVRKREMRRRAEKAAKAAAANVFADPVVVATGLQIVRAIGAKRLIPI 120
           +F ++TLIA + Y +R+  M++RA K A++AA ++ ADP++VA GLQ+VRAIG K+LIPI
Sbjct: 61  IFFLITLIAVATYTIRRNAMKKRAAKTARSAAQSLLADPMLVAAGLQLVRAIGIKKLIPI 120


>ref|ZP_07025465.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gb|EFI52607.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 139

 Score =  150 bits (378), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 97/133 (72%)

Query: 1   MLQRLINDVKDATGKALRLTSLAAAAAIALFITIAFLCAAAFIYVLQHYGPVEACLAGAA 60
           ML + I+D+K++ G A+RLTSLAAA A+ LFIT  FLC AAF+ VL  YGPV ACLAGAA
Sbjct: 1   MLDKFIDDLKESAGTAMRLTSLAAAVAVCLFITTGFLCGAAFVAVLDKYGPVYACLAGAA 60

Query: 61  LFLVVTLIAASVYIVRKREMRRRAEKAAKAAAANVFADPVVVATGLQIVRAIGAKRLIPI 120
           +F V   +AA  Y +RKR +R+R  +AAK+       DP+V+AT LQ VR IG KR+IP+
Sbjct: 61  VFFVCAAMAAICYALRKRAIRQRRVEAAKSTLQTALGDPLVIATALQAVRIIGVKRMIPL 120

Query: 121 VAVGGFALGLMAS 133
           +A+GG ALGLM+ 
Sbjct: 121 LAIGGIALGLMSK 133


>ref|YP_578757.1| hypothetical protein Nham_3568 [Nitrobacter hamburgensis X14]
 gb|ABE64297.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 147

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 92/120 (76%)

Query: 1   MLQRLINDVKDATGKALRLTSLAAAAAIALFITIAFLCAAAFIYVLQHYGPVEACLAGAA 60
           M QR I+D K++ G A+RLTSLA  A  A F+TI FLCAAAF++VLQ+YG +EACL GAA
Sbjct: 1   MFQRAIDDFKESAGNAVRLTSLAGVAVFAGFVTIVFLCAAAFVFVLQNYGLIEACLTGAA 60

Query: 61  LFLVVTLIAASVYIVRKREMRRRAEKAAKAAAANVFADPVVVATGLQIVRAIGAKRLIPI 120
           +F ++TLIA   Y +R+  M++R  K A++AA N+ ADP++V  GLQ+VRAIG K+LIPI
Sbjct: 61  IFFLITLIAVVTYAIRRNAMKKRVAKTARSAAQNLLADPMLVTAGLQLVRAIGIKKLIPI 120