BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0146.0055.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768106.1| hypothetical protein bll1466 [Bradyrhizobium ja...   177   7e-43
ref|YP_001242788.1| hypothetical protein BBta_6997 [Bradyrhizobi...   171   2e-41
ref|ZP_08628426.1| hypothetical protein CSIRO_1501 [Bradyrhizobi...   162   1e-38
ref|YP_578756.1| protein of unknown function DUF883, ElaB [Nitro...   162   1e-38
ref|YP_571590.1| protein of unknown function DUF883, ElaB [Nitro...   160   6e-38

>ref|NP_768106.1| hypothetical protein bll1466 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46731.1| bll1466 [Bradyrhizobium japonicum USDA 110]
          Length = 150

 Score =  177 bits (448), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 101/123 (82%)

Query: 1   MSSTDSAFGIKNMTDKATYERLEKDVTAVKNDIAALTEQITDALNSFANNAGKQARRRYK 60
           MS  D    +++  DKAT ERLEKDV AVKNDIAALT+QITDALN+FAN+AGKQARR YK
Sbjct: 28  MSIADGETRMRDWIDKATAERLEKDVAAVKNDIAALTDQITDALNTFANSAGKQARRGYK 87

Query: 61  DARASAEDTLDDMSERGSAMMGAAQDAASSIEESLEDMITQRPLATVGLALGLGFLIGVT 120
            AR + + TLDDMSER SAMMGAAQDA  SIEE+LED IT RPLATVG+ALG+GFLIG  
Sbjct: 88  QARENMDSTLDDMSERSSAMMGAAQDAYGSIEETLEDAITARPLATVGIALGIGFLIGAA 147

Query: 121 WRR 123
           WRR
Sbjct: 148 WRR 150


>ref|YP_001242788.1| hypothetical protein BBta_6997 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38882.1| hypothetical protein BBta_6997 [Bradyrhizobium sp. BTAi1]
          Length = 123

 Score =  171 bits (434), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/123 (67%), Positives = 99/123 (80%)

Query: 1   MSSTDSAFGIKNMTDKATYERLEKDVTAVKNDIAALTEQITDALNSFANNAGKQARRRYK 60
           M  T     + ++ DKA YERL+KDV AVKNDIAALT+QITD LN+FA  AGKQAR  Y+
Sbjct: 1   MPPTHGDTALNDLADKANYERLQKDVHAVKNDIAALTDQITDVLNAFAGQAGKQARSGYR 60

Query: 61  DARASAEDTLDDMSERGSAMMGAAQDAASSIEESLEDMITQRPLATVGLALGLGFLIGVT 120
            AR + + T+DDMSERG AM  AAQDAA+S+EE LED+I+QRPLATVGLALGLGFLIGV+
Sbjct: 61  QARENMDQTIDDMSERGGAMFSAAQDAANSLEERLEDVISQRPLATVGLALGLGFLIGVS 120

Query: 121 WRR 123
           W+R
Sbjct: 121 WKR 123


>ref|ZP_08628426.1| hypothetical protein CSIRO_1501 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08929.1| hypothetical protein CSIRO_1501 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 123

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/123 (65%), Positives = 97/123 (78%)

Query: 1   MSSTDSAFGIKNMTDKATYERLEKDVTAVKNDIAALTEQITDALNSFANNAGKQARRRYK 60
           MSSTD    ++ MTDKATYERL+KDV AVKNDI+AL +QI+D + +F  +A KQARR YK
Sbjct: 1   MSSTDGEDAMRQMTDKATYERLQKDVEAVKNDISALADQISDVIEAFKGDARKQARRTYK 60

Query: 61  DARASAEDTLDDMSERGSAMMGAAQDAASSIEESLEDMITQRPLATVGLALGLGFLIGVT 120
            ARA+ +  + D S+RGS  + AAQD A ++EESLED ITQRPLA VGLA+GLGFLIGVT
Sbjct: 61  QARANVDSMMSDASQRGSEALEAAQDYAGTLEESLEDAITQRPLAAVGLAVGLGFLIGVT 120

Query: 121 WRR 123
           WRR
Sbjct: 121 WRR 123


>ref|YP_578756.1| protein of unknown function DUF883, ElaB [Nitrobacter hamburgensis
           X14]
 gb|ABE64296.1| protein of unknown function DUF883, ElaB [Nitrobacter hamburgensis
           X14]
          Length = 123

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/123 (64%), Positives = 100/123 (81%)

Query: 1   MSSTDSAFGIKNMTDKATYERLEKDVTAVKNDIAALTEQITDALNSFANNAGKQARRRYK 60
           M+S+D    +KN+TDKATYERLEKD+++VKNDI+AL +QI+DAL +    A KQ RR YK
Sbjct: 1   MASSDGEDAMKNLTDKATYERLEKDLSSVKNDISALADQISDALGTLTGAAKKQTRRGYK 60

Query: 61  DARASAEDTLDDMSERGSAMMGAAQDAASSIEESLEDMITQRPLATVGLALGLGFLIGVT 120
            ARA+ +  L D+SERG+A + AAQ+A SSIE++LE+ I QRPLATVGLA+GLGFLIGVT
Sbjct: 61  QARANVDSVLSDVSERGNAAIDAAQNAVSSIEDTLEEAIQQRPLATVGLAIGLGFLIGVT 120

Query: 121 WRR 123
           WRR
Sbjct: 121 WRR 123


>ref|YP_571590.1| protein of unknown function DUF883, ElaB [Nitrobacter hamburgensis
           X14]
 gb|ABE64758.1| protein of unknown function DUF883, ElaB [Nitrobacter hamburgensis
           X14]
          Length = 123

 Score =  160 bits (405), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 99/123 (80%)

Query: 1   MSSTDSAFGIKNMTDKATYERLEKDVTAVKNDIAALTEQITDALNSFANNAGKQARRRYK 60
           MSS+D    + N+TDKATYERLEKD+++VK+DIAAL +Q++DAL +    A KQ RR YK
Sbjct: 1   MSSSDGEGAMMNLTDKATYERLEKDLSSVKSDIAALADQVSDALGTLTGTAKKQTRRGYK 60

Query: 61  DARASAEDTLDDMSERGSAMMGAAQDAASSIEESLEDMITQRPLATVGLALGLGFLIGVT 120
            ARA+ +  L D+SERG+A + AAQ+A SSIE++LE+ I QRPLATVGLA+GLGFLIGVT
Sbjct: 61  QARANVDSVLSDVSERGNAAIDAAQNAVSSIEDTLEEAIQQRPLATVGLAIGLGFLIGVT 120

Query: 121 WRR 123
           WRR
Sbjct: 121 WRR 123