BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0054.p (370 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203205.1| putative permease [Bradyrhizobium sp. ORS 27... 531 e-148 ref|NP_768107.1| hypothetical protein bll1467 [Bradyrhizobium ja... 519 e-145 ref|YP_001242787.1| putative permease [Bradyrhizobium sp. BTAi1]... 512 e-143 ref|YP_485011.1| hypothetical protein RPB_1390 [Rhodopseudomonas... 468 e-130 ref|YP_568509.1| hypothetical protein RPD_1370 [Rhodopseudomonas... 467 e-129 >ref|YP_001203205.1| putative permease [Bradyrhizobium sp. ORS 278] emb|CAL74968.1| putative permease [Bradyrhizobium sp. ORS 278] Length = 372 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 256/372 (68%), Positives = 311/372 (83%), Gaps = 2/372 (0%) Query: 1 VRAFASEDLLGNAPEGTPVPDSKIELPPVVSRAEAVAFALIALLVIVVVAVLYFARAFFL 60 +R +E LLG+ +G+ + +S ELPPV+ RAE VA AL+ L VI V +VLY AR FFL Sbjct: 1 MRVLPTERLLGSGNDGSALNESHQELPPVIKRAEVVAIALVILTVICVTSVLYVARGFFL 60 Query: 61 PITMAFIVGTMLSPAASMLERYRIPRALGAVAIVIAVGAAVSFMVGLIASPVMEWSSRLP 120 PI MAF+VGTMLSPAA++LERYR+PR +GAV IVIAV A ++F++GLI++PV++W++RLP Sbjct: 61 PIVMAFVVGTMLSPAANLLERYRVPRGIGAVLIVIAVAAGLAFIIGLISAPVLDWTNRLP 120 Query: 121 ELGAILREKLHVFDRPLALWQELQTMVGGSDTLA--TLQLPKFEWVQPTLEFLSPTFAEF 178 EL A L+ KLHVFD+PLALW E+QT +GG A TL+LPK +WVQPT+EFL+PTF EF Sbjct: 121 ELAAQLKAKLHVFDKPLALWHEMQTAIGGGSAQASNTLELPKLDWVQPTIEFLTPTFTEF 180 Query: 179 LLFIATLILFIASWKDLRRALVMAFSERTARLRTLRILNEVETHLGNYLLMVTMINVGVG 238 +LF ATL+LFIASW+DLRR L+M F + ARLRTLRILNE+E HLGNYL+ VT+IN GVG Sbjct: 181 MLFFATLVLFIASWRDLRRTLIMTFGDHEARLRTLRILNELELHLGNYLMTVTLINTGVG 240 Query: 239 IVTGAICAATGMPNPAGLGALAATLNFVPIIGPVAMFVVLVAVGIISAPTIGAGLIAPAC 298 + TG CA TGMPNPAGLGALAATLNFVPIIGP+AMF+VLV VG+I+ PT+ G+ AP Sbjct: 241 VATGLACAVTGMPNPAGLGALAATLNFVPIIGPIAMFMVLVLVGLIAFPTLSGGMAAPLI 300 Query: 299 FAVVTFLEGHFVTPTIVGRRLSLNALAVFLALAFWTWLWGPMGAFLSSPLLIVALIVKEH 358 FAV+TF+EGHFVTPTI+GRRL+LNALAVF+ALAFWTWLWGPMGAFL+SPLLIV LIVKEH Sbjct: 301 FAVITFMEGHFVTPTIIGRRLALNALAVFIALAFWTWLWGPMGAFLASPLLIVGLIVKEH 360 Query: 359 LMPVNSPQLPED 370 L+P SPQLP D Sbjct: 361 LLPDTSPQLPAD 372 >ref|NP_768107.1| hypothetical protein bll1467 [Bradyrhizobium japonicum USDA 110] dbj|BAC46732.1| bll1467 [Bradyrhizobium japonicum USDA 110] Length = 382 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/369 (74%), Positives = 312/369 (84%) Query: 1 VRAFASEDLLGNAPEGTPVPDSKIELPPVVSRAEAVAFALIALLVIVVVAVLYFARAFFL 60 VR SE L+ EG P+PDS ELPPV+ R E VA+AL LL+I V+ VLYFA+AFFL Sbjct: 13 VRVLPSERLISGNGEGAPLPDSHSELPPVIRRTEFVAYALAGLLLIAVIGVLYFAKAFFL 72 Query: 61 PITMAFIVGTMLSPAASMLERYRIPRALGAVAIVIAVGAAVSFMVGLIASPVMEWSSRLP 120 P+ MA + GTMLSPAAS LER +PRALGAV IV AV V+F+V LIA P MEWSSRLP Sbjct: 73 PVVMAVVAGTMLSPAASFLERRGVPRALGAVLIVTAVTTVVAFVVALIAVPAMEWSSRLP 132 Query: 121 ELGAILREKLHVFDRPLALWQELQTMVGGSDTLATLQLPKFEWVQPTLEFLSPTFAEFLL 180 ELGA L+EKLHVFDRPLALW+ELQTMVGGS+ L +L LPK EWVQPTLEFLSPTFAEFLL Sbjct: 133 ELGAQLKEKLHVFDRPLALWKELQTMVGGSEGLPSLPLPKAEWVQPTLEFLSPTFAEFLL 192 Query: 181 FIATLILFIASWKDLRRALVMAFSERTARLRTLRILNEVETHLGNYLLMVTMINVGVGIV 240 F ATLILFIASW+DLRRAL+M F +R ARLRTLRILNE+E HLGNYLL VT+IN+GVG+ Sbjct: 193 FFATLILFIASWRDLRRALIMNFGDRDARLRTLRILNEIEVHLGNYLLTVTVINIGVGVA 252 Query: 241 TGAICAATGMPNPAGLGALAATLNFVPIIGPVAMFVVLVAVGIISAPTIGAGLIAPACFA 300 TG ICA TGMPNPAGLGALAA LNF+PIIGP+AMF+VL+ VG+++ PT+G GL+A F Sbjct: 253 TGIICAITGMPNPAGLGALAAALNFIPIIGPIAMFIVLIVVGLVAFPTLGGGLMAGLAFG 312 Query: 301 VVTFLEGHFVTPTIVGRRLSLNALAVFLALAFWTWLWGPMGAFLSSPLLIVALIVKEHLM 360 +TFLEGHFVTPTI+GRRLSLNALAVF+ALAFWTWLWGPMGAFLSSPLLIV LI+KEHL+ Sbjct: 313 GITFLEGHFVTPTIIGRRLSLNALAVFIALAFWTWLWGPMGAFLSSPLLIVGLILKEHLL 372 Query: 361 PVNSPQLPE 369 P NSPQLP+ Sbjct: 373 PENSPQLPQ 381 >ref|YP_001242787.1| putative permease [Bradyrhizobium sp. BTAi1] gb|ABQ38881.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 372 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 246/372 (66%), Positives = 302/372 (81%), Gaps = 2/372 (0%) Query: 1 VRAFASEDLLGNAPEGTPVPDSKIELPPVVSRAEAVAFALIALLVIVVVAVLYFARAFFL 60 +R +E + + + + +S+ ELPPV+ RAE VA AL+ L I V VLY A+ FFL Sbjct: 1 MRVLPTERVTAGGNDSSALTESRHELPPVIKRAEIVAVALVILTAICVTGVLYVAKGFFL 60 Query: 61 PITMAFIVGTMLSPAASMLERYRIPRALGAVAIVIAVGAAVSFMVGLIASPVMEWSSRLP 120 PI MAF+VGTMLSPAA+ LER+R+PR +GAV IVIAV A ++F++GLI++PV++W++RLP Sbjct: 61 PIVMAFVVGTMLSPAANFLERHRVPRGIGAVLIVIAVAAGLAFIIGLISAPVLDWTNRLP 120 Query: 121 ELGAILREKLHVFDRPLALWQELQTMVGGSDTLA--TLQLPKFEWVQPTLEFLSPTFAEF 178 EL L+ KLHVFDRP A+W E+Q +GG A +L+LPKF+WVQPT+EFLSPTF EF Sbjct: 121 ELATQLKAKLHVFDRPFAMWHEMQAAIGGGSAQAPPSLELPKFDWVQPTIEFLSPTFTEF 180 Query: 179 LLFIATLILFIASWKDLRRALVMAFSERTARLRTLRILNEVETHLGNYLLMVTMINVGVG 238 LLF ATL+LFIASW+DLRR L+M F + ARLRTLRILNE+E HLGNYLL VT+IN GVG Sbjct: 181 LLFFATLVLFIASWRDLRRTLIMTFGDHDARLRTLRILNELELHLGNYLLTVTLINTGVG 240 Query: 239 IVTGAICAATGMPNPAGLGALAATLNFVPIIGPVAMFVVLVAVGIISAPTIGAGLIAPAC 298 + TG CA TGMPNPAGLGALAATLNF+PIIGP+A F VL+ VG+I+ PT+ G++AP Sbjct: 241 VATGLACALTGMPNPAGLGALAATLNFIPIIGPIATFCVLIMVGLIAFPTLSGGMVAPLI 300 Query: 299 FAVVTFLEGHFVTPTIVGRRLSLNALAVFLALAFWTWLWGPMGAFLSSPLLIVALIVKEH 358 FA +TF+EGHFVTPTI+GRRL+LNALAVF+ALAFWTWLWGPMGAFL+SPLLIVALIVKEH Sbjct: 301 FAAITFMEGHFVTPTIIGRRLALNALAVFIALAFWTWLWGPMGAFLASPLLIVALIVKEH 360 Query: 359 LMPVNSPQLPED 370 L+P SPQLP D Sbjct: 361 LLPDTSPQLPAD 372 >ref|YP_485011.1| hypothetical protein RPB_1390 [Rhodopseudomonas palustris HaA2] gb|ABD06100.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris HaA2] Length = 368 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 240/357 (67%), Positives = 292/357 (81%), Gaps = 2/357 (0%) Query: 14 PEGTPVPDSKIELPPVVSRAEAVAFALIALLVIVVVAVLYFARAFFLPITMAFIVGTMLS 73 P GTP+PDSK E PP++ R E VAFAL+ALL+IVV+ +LY A+ FFLPI AF+VGTMLS Sbjct: 8 PAGTPLPDSKDERPPLIRRTEIVAFALVALLIIVVIGLLYVAKPFFLPIVTAFVVGTMLS 67 Query: 74 PAASMLERYRIPRALGAVAIVIAVGAAVSFMVGLIASPVMEWSSRLPELGAILREKLHVF 133 PAA+ LER+RIPRA+ AV IV A V FMV LI+ P+++W+SRLPELG ILR+KL F Sbjct: 68 PAATYLERWRIPRAVCAVLIVALALAGVGFMVALISVPLIDWTSRLPELGVILRDKLSFF 127 Query: 134 DRPLALWQELQTMVGGSDTL--ATLQLPKFEWVQPTLEFLSPTFAEFLLFIATLILFIAS 191 +RP+ LW++LQ+ +GG++ A Q+P+ +W+QPTLEFLSPT EFLLF+ TL+LFIAS Sbjct: 128 ERPMGLWRQLQSALGGTEPAVPAPSQMPQIDWMQPTLEFLSPTLTEFLLFLVTLVLFIAS 187 Query: 192 WKDLRRALVMAFSERTARLRTLRILNEVETHLGNYLLMVTMINVGVGIVTGAICAATGMP 251 WKDLRRALVM F R ARLRTLRILNE+E LG YLL VT+IN+ G TG +CA GMP Sbjct: 188 WKDLRRALVMNFGGRDARLRTLRILNEIEQSLGGYLLTVTIINLCYGAATGVLCALAGMP 247 Query: 252 NPAGLGALAATLNFVPIIGPVAMFVVLVAVGIISAPTIGAGLIAPACFAVVTFLEGHFVT 311 NPAGLGALAATLNF+P+IGP+ MFV+L VGIIS PT+G GL+AP FAV+TF+EGHF+T Sbjct: 248 NPAGLGALAATLNFIPVIGPIVMFVILTLVGIISMPTMGEGLLAPLGFAVLTFVEGHFIT 307 Query: 312 PTIVGRRLSLNALAVFLALAFWTWLWGPMGAFLSSPLLIVALIVKEHLMPVNSPQLP 368 PTI+GRRL LNALAVF+ALAFWTWLWGPMG FL+SPLLIV L++KEHL ++PQLP Sbjct: 308 PTIIGRRLELNALAVFIALAFWTWLWGPMGGFLASPLLIVGLVLKEHLTAEDTPQLP 364 >ref|YP_568509.1| hypothetical protein RPD_1370 [Rhodopseudomonas palustris BisB5] gb|ABE38608.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB5] Length = 367 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 238/356 (66%), Positives = 293/356 (82%), Gaps = 1/356 (0%) Query: 14 PEGTPVPDSKIELPPVVSRAEAVAFALIALLVIVVVAVLYFARAFFLPITMAFIVGTMLS 73 P G P+PDSK E PP++ R E VAFAL+ALL++VV+ +LY A+ FFLPI AF+VGTMLS Sbjct: 8 PAGAPLPDSKEERPPLIRRTEIVAFALVALLIVVVIGLLYVAKPFFLPIVTAFVVGTMLS 67 Query: 74 PAASMLERYRIPRALGAVAIVIAVGAAVSFMVGLIASPVMEWSSRLPELGAILREKLHVF 133 PAA+ +ER RIPRA+ AV IV A V FMV LI+ P+++W+SRLPELGAILR+KL+ F Sbjct: 68 PAATYMERGRIPRAVSAVLIVGLALAGVGFMVALISVPLIDWTSRLPELGAILRDKLNFF 127 Query: 134 DRPLALWQELQTMVGGSDTLAT-LQLPKFEWVQPTLEFLSPTFAEFLLFIATLILFIASW 192 +RP+A W++LQ+ +GGS+ +T +Q+P+ EW+QPT+EFLSPT EFLLF+ TL+LFIA+W Sbjct: 128 ERPMAFWRQLQSAMGGSELPSTPIQMPQIEWMQPTVEFLSPTLTEFLLFLVTLVLFIATW 187 Query: 193 KDLRRALVMAFSERTARLRTLRILNEVETHLGNYLLMVTMINVGVGIVTGAICAATGMPN 252 KDLRRALVM F R ARLR LRILNE+E LG YLL VT+IN+ G TG ICA GMPN Sbjct: 188 KDLRRALVMNFGGRDARLRMLRILNEIEQSLGGYLLTVTVINLCYGAATGVICALAGMPN 247 Query: 253 PAGLGALAATLNFVPIIGPVAMFVVLVAVGIISAPTIGAGLIAPACFAVVTFLEGHFVTP 312 PAGLGALAATLNF+P+IGPV MFV+L VGIIS PT+G GL+AP F ++TF+EGHF+TP Sbjct: 248 PAGLGALAATLNFIPVIGPVVMFVILTLVGIISMPTMGEGLLAPIGFVLLTFVEGHFITP 307 Query: 313 TIVGRRLSLNALAVFLALAFWTWLWGPMGAFLSSPLLIVALIVKEHLMPVNSPQLP 368 TI+GRRL LNALAVF+ALAFWTWLWGPMG FL+SPLLIV L++KEHL P ++PQLP Sbjct: 308 TIIGRRLELNALAVFIALAFWTWLWGPMGGFLASPLLIVGLVLKEHLTPDDAPQLP 363