BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0146.0044.p         (165 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771023.1| hypothetical protein blr4383 [Bradyrhizobium ja...   248   1e-64
ref|YP_004156125.1| Cupin 2 barrel domain-containing protein [Va...   119   1e-25
ref|YP_002947500.1| Cupin 2 conserved barrel domain protein [Var...   119   1e-25
ref|YP_001772360.1| cupin 2 domain-containing protein [Methyloba...   116   1e-24
gb|AEG06408.1| Cupin 2 conserved barrel domain protein [Sinorhiz...   109   2e-22

>ref|NP_771023.1| hypothetical protein blr4383 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49648.1| blr4383 [Bradyrhizobium japonicum USDA 110]
          Length = 167

 Score =  248 bits (634), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 125/167 (74%), Positives = 142/167 (85%), Gaps = 2/167 (1%)

Query: 1   MTSMAM-TPSLPFP-RPVALAVIAGLACAFVIGKALPTPMDAISSVIAPLCASANAASPL 58
           MT+M++ T   P P R +ALAV  GLACA  IGKALP  M+ +S  +APLCA+A  +SPL
Sbjct: 1   MTAMSLATTQRPVPSRSMALAVAGGLACALAIGKALPLTMETVSGALAPLCATAAESSPL 60

Query: 59  DKVEVISSHALPNVAGKRVTVVRVFYGPGGFTPPHRHSGSVTAYITKGEIRSQLGGGPVE 118
           DKVE I S+ALPNV GKRVT+VRVFYGPGGFT PHRH+GSVTAY+TKGEIRSQLGGGPVE
Sbjct: 61  DKVEPIGSYALPNVPGKRVTIVRVFYGPGGFTRPHRHAGSVTAYVTKGEIRSQLGGGPVE 120

Query: 119 TFKVGQSFFEPPGSTHMVSANASTTEPAELIAVFVADEGAQLTTMLE 165
           TF VGQSFFEPPG+TH+VSANAS T+PAELIAVFVADEGAQLTT L+
Sbjct: 121 TFGVGQSFFEPPGATHLVSANASATQPAELIAVFVADEGAQLTTFLD 167


>ref|YP_004156125.1| Cupin 2 barrel domain-containing protein [Variovorax paradoxus EPS]
 gb|ADU38014.1| Cupin 2 conserved barrel domain protein [Variovorax paradoxus EPS]
          Length = 177

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/125 (52%), Positives = 82/125 (65%), Gaps = 7/125 (5%)

Query: 39  DAISSVIAPLCASA-------NAASPLDKVEVISSHALPNVAGKRVTVVRVFYGPGGFTP 91
           D  S+V  P+ +SA        AA P    +VIS  ALP+V GK VT V V + P  ++P
Sbjct: 44  DVCSAVSRPMFSSAPAPAGSGEAARPATSTKVISCEALPHVPGKSVTTVIVDFPPLAYSP 103

Query: 92  PHRHSGSVTAYITKGEIRSQLGGGPVETFKVGQSFFEPPGSTHMVSANASTTEPAELIAV 151
            HRH GSVTA I  G IRSQLGGGPV T+K G++FFEPPG+ H+ + N    +PA+L+AV
Sbjct: 104 AHRHPGSVTAIILGGTIRSQLGGGPVGTYKTGETFFEPPGTLHVFAENPDPVKPAKLVAV 163

Query: 152 FVADE 156
           FVADE
Sbjct: 164 FVADE 168


>ref|YP_002947500.1| Cupin 2 conserved barrel domain protein [Variovorax paradoxus S110]
 gb|ACS22234.1| Cupin 2 conserved barrel domain protein [Variovorax paradoxus S110]
          Length = 179

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 7/125 (5%)

Query: 39  DAISSVIAPLCASANA-------ASPLDKVEVISSHALPNVAGKRVTVVRVFYGPGGFTP 91
           D  SSV  P+ ASA A       A P    +V+S  ALPNV GK VT V V + P  ++P
Sbjct: 43  DMCSSVARPMFASAPAPAGSGADARPATSSKVLSCEALPNVPGKSVTTVLVDFPPLAYSP 102

Query: 92  PHRHSGSVTAYITKGEIRSQLGGGPVETFKVGQSFFEPPGSTHMVSANASTTEPAELIAV 151
            HRH GSVTA I +G IRSQLGGGPV T+K G++FFEPP + H+ + N     PA+L+AV
Sbjct: 103 AHRHPGSVTAIILEGTIRSQLGGGPVGTYKSGETFFEPPRTLHLFAENPDPVRPAKLLAV 162

Query: 152 FVADE 156
           FVADE
Sbjct: 163 FVADE 167


>ref|YP_001772360.1| cupin 2 domain-containing protein [Methylobacterium sp. 4-46]
 gb|ACA19926.1| Cupin 2 conserved barrel domain protein [Methylobacterium sp. 4-46]
          Length = 145

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 70/100 (70%), Gaps = 1/100 (1%)

Query: 64  ISSHALPNVAGKRVTVVRVFYGPGGFTPPHRHSGSVTAYITKGEIRSQLGG-GPVETFKV 122
           +   AL N +GK ++ V V Y PG  +P HRH+GSV AY+  GEIRSQ    G    +K 
Sbjct: 43  VMQQALANASGKTLSAVVVTYAPGQASPAHRHAGSVFAYVLSGEIRSQNSATGAARVYKA 102

Query: 123 GQSFFEPPGSTHMVSANASTTEPAELIAVFVADEGAQLTT 162
           G+SFFEPPGS H++S NAS TEPA L+AVFVAD+GA LTT
Sbjct: 103 GESFFEPPGSEHLISENASRTEPARLLAVFVADDGAVLTT 142


>gb|AEG06408.1| Cupin 2 conserved barrel domain protein [Sinorhizobium meliloti
           BL225C]
          Length = 138

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 11/136 (8%)

Query: 41  ISSVIAPLCA-----SANAASPLDKVEVISSH---ALPNVAGKRVTVVRVFYGPGGFTPP 92
           I S+I+  CA     SA  A+  D  +V++ H   A+PN+ GK +T + V Y PGG + P
Sbjct: 3   IRSLISATCAALAITSAMPAAAHDPGDVVTPHFERAIPNIPGKTLTALIVDYPPGGTSAP 62

Query: 93  HRHSGS--VTAYITKGEIRSQLGGGPVETFKVGQSFFEPPGSTHMVSANASTTEPAELIA 150
           HRH+ S  + AY+  GEI S++  GP + ++ G+S++EPP + H++S NAS T PA+L+A
Sbjct: 63  HRHADSSFIFAYVLSGEIESKVNDGPTQIYRAGESWYEPPAANHLISRNASKTRPAKLLA 122

Query: 151 VFVAD-EGAQLTTMLE 165
           VFVAD +  +LTT +E
Sbjct: 123 VFVADSDEKELTTNIE 138