BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0043.p (159 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771022.1| hypothetical protein blr4382 [Bradyrhizobium ja... 245 1e-63 ref|YP_001239981.1| hypothetical protein BBta_4008 [Bradyrhizobi... 230 5e-59 ref|YP_001205587.1| putative carboxymuconolactone decarboxylase ... 221 2e-56 ref|YP_004784335.1| alkylhydroperoxidase like protein [Acidithio... 161 3e-38 ref|YP_002220109.1| AhpD family alkylhydroperoxidase-like protei... 157 5e-37 >ref|NP_771022.1| hypothetical protein blr4382 [Bradyrhizobium japonicum USDA 110] dbj|BAC49647.1| blr4382 [Bradyrhizobium japonicum USDA 110] Length = 158 Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 118/158 (74%), Positives = 131/158 (82%) Query: 1 MSHARKEYTDFEKLAPDVFAAVRALGQFAAKAGLDKQLLELVKLRASQINGCAFCVQYHI 60 MSHAR EY DF+++APD + V ALGQ AAKAGLDKQLLELVKLRASQINGCAFCVQ+HI Sbjct: 1 MSHARSEYEDFKRIAPDAYDLVLALGQVAAKAGLDKQLLELVKLRASQINGCAFCVQHHI 60 Query: 61 LQGESLGVPADKLNLVVVWREAPQFTPRERAALAWTEALTTLPNGVSDEVYGLAAAEFSE 120 L E +GVP DKLNLV VWREAP ++ RERAALAWTEALT LP+GVSDEVY +EFSE Sbjct: 61 LLSERIGVPVDKLNLVAVWREAPIYSARERAALAWTEALTFLPDGVSDEVYAEVTSEFSE 120 Query: 121 QELTYLTSAIASINVWNRFGAAYRWTPPPRRQRADAAA 158 EL YLTSA+ASINVWNRFGAAYRWTP R +AA+ Sbjct: 121 SELMYLTSAVASINVWNRFGAAYRWTPAKRPVATNAAS 158 >ref|YP_001239981.1| hypothetical protein BBta_4008 [Bradyrhizobium sp. BTAi1] gb|ABQ36075.1| hypothetical protein BBta_4008 [Bradyrhizobium sp. BTAi1] Length = 156 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 110/154 (71%), Positives = 126/154 (81%) Query: 1 MSHARKEYTDFEKLAPDVFAAVRALGQFAAKAGLDKQLLELVKLRASQINGCAFCVQYHI 60 MSHAR +YT F AP+++ A+ A+ Q AAKAGLDKQLLELVK+RASQINGCAFCVQ+H+ Sbjct: 1 MSHARSDYTSFRNQAPELYDAILAVSQQAAKAGLDKQLLELVKIRASQINGCAFCVQHHV 60 Query: 61 LQGESLGVPADKLNLVVVWREAPQFTPRERAALAWTEALTTLPNGVSDEVYGLAAAEFSE 120 L E LGV ADK+NLVV WREAPQF+ RERAALA+TEALT L GVSDEVYGLA AEFSE Sbjct: 61 LLAEKLGVSADKINLVVAWREAPQFSSRERAALAFTEALTKLDGGVSDEVYGLARAEFSE 120 Query: 121 QELTYLTSAIASINVWNRFGAAYRWTPPPRRQRA 154 EL +LTSAI IN+WNR+G A+RWTP R RA Sbjct: 121 TELVFLTSAIGVINLWNRYGVAFRWTPAERPARA 154 >ref|YP_001205587.1| putative carboxymuconolactone decarboxylase (CMD) family protein [Bradyrhizobium sp. ORS 278] emb|CAL77361.1| conserved hypothetical protein; putative carboxymuconolactone decarboxylase (CMD) family protein [Bradyrhizobium sp. ORS 278] Length = 156 Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 106/154 (68%), Positives = 125/154 (81%) Query: 1 MSHARKEYTDFEKLAPDVFAAVRALGQFAAKAGLDKQLLELVKLRASQINGCAFCVQYHI 60 MS AR +YT F AP+++ A+ A+ Q AAKAGLDKQLLEL+K+RASQINGCAFCVQ+H+ Sbjct: 1 MSLARSDYTTFRSQAPELYEAILAVSQQAAKAGLDKQLLELIKIRASQINGCAFCVQHHV 60 Query: 61 LQGESLGVPADKLNLVVVWREAPQFTPRERAALAWTEALTTLPNGVSDEVYGLAAAEFSE 120 L E LGV ADK+NLVVVWREAPQF+ RERAALA+TEALT L +GVSDEVY A AEFS+ Sbjct: 61 LLAERLGVSADKINLVVVWREAPQFSARERAALAFTEALTRLEDGVSDEVYDAARAEFSD 120 Query: 121 QELTYLTSAIASINVWNRFGAAYRWTPPPRRQRA 154 EL +LTSAI IN+WNR+G A+RWTP R RA Sbjct: 121 TELVFLTSAIGVINLWNRYGVAFRWTPAERLARA 154 >ref|YP_004784335.1| alkylhydroperoxidase like protein [Acidithiobacillus ferrivorans SS3] gb|AEM48009.1| alkylhydroperoxidase like protein, AhpD family [Acidithiobacillus ferrivorans SS3] Length = 159 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 77/150 (51%), Positives = 104/150 (69%), Gaps = 1/150 (0%) Query: 3 HARKEYTDFEKLAPDVFAAVRALGQFAAKAGLDKQLLELVKLRASQINGCAFCVQYHILQ 62 HAR +Y F K+AP+V+AA+ A+G+ +GL+K L EL+K+R SQ+NGCAFC+QYH+ Sbjct: 5 HARIDYLPFTKIAPEVYAALLAIGKAVDGSGLEKTLTELIKIRVSQVNGCAFCIQYHLNV 64 Query: 63 GESLGVPADKLNLVVVWREAPQFTPRERAALAWTEALTTL-PNGVSDEVYGLAAAEFSEQ 121 +GV A KL+LV WR+A F+ RE+AALAW E LT L G D VY ++F+E Sbjct: 65 ARQIGVEAVKLDLVAGWRDAGIFSAREQAALAWAECLTALATQGAPDAVYEALQSQFTET 124 Query: 122 ELTYLTSAIASINVWNRFGAAYRWTPPPRR 151 E+T+LT AI +IN WNR G R++PPP R Sbjct: 125 EVTFLTVAIGAINHWNRLGVGLRFSPPPPR 154 >ref|YP_002220109.1| AhpD family alkylhydroperoxidase-like protein [Acidithiobacillus ferrooxidans ATCC 53993] ref|YP_002426419.1| alkylhydroperoxidase AhpD family core domain protein [Acidithiobacillus ferrooxidans ATCC 23270] gb|ACH83902.1| alkylhydroperoxidase like protein, AhpD family [Acidithiobacillus ferrooxidans ATCC 53993] gb|ACK80115.1| alkylhydroperoxidase AhpD family core domain protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 159 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 76/150 (50%), Positives = 101/150 (67%), Gaps = 1/150 (0%) Query: 3 HARKEYTDFEKLAPDVFAAVRALGQFAAKAGLDKQLLELVKLRASQINGCAFCVQYHILQ 62 HAR Y F K AP+V+AA+ A+G+ +GL+K L EL+K+R SQINGCAFC+QYH+ Sbjct: 5 HARIAYLSFTKTAPEVYAALLAMGKAVDDSGLEKPLTELIKVRVSQINGCAFCIQYHLNV 64 Query: 63 GESLGVPADKLNLVVVWREAPQFTPRERAALAWTEALTTL-PNGVSDEVYGLAAAEFSEQ 121 +G+ KL+LV WR+A F+ RE+AALAW E LT L G D VY ++F+E Sbjct: 65 ARQIGMEPVKLDLVAGWRDAGVFSAREQAALAWAECLTALATQGAPDAVYETLQSQFTET 124 Query: 122 ELTYLTSAIASINVWNRFGAAYRWTPPPRR 151 E+T+LT AI +IN WNR G R++PPP R Sbjct: 125 EVTFLTVAIGAINHWNRLGVGLRFSPPPPR 154