BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0041.p (411 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771020.1| transglycolase [Bradyrhizobium japonicum USDA 1... 728 0.0 ref|YP_001239979.1| putative membrane-bound lytic transglycosyla... 686 0.0 ref|YP_318257.1| lytic murein transglycosylase [Nitrobacter wino... 681 0.0 ref|YP_001205585.1| putative membrane-bound lytic transglycosyla... 681 0.0 ref|YP_004109319.1| lytic murein transglycosylase [Rhodopseudomo... 676 0.0 >ref|NP_771020.1| transglycolase [Bradyrhizobium japonicum USDA 110] dbj|BAC49645.1| bll4380 [Bradyrhizobium japonicum USDA 110] Length = 409 Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/410 (85%), Positives = 371/410 (90%), Gaps = 2/410 (0%) Query: 1 MKQPDSPQSPARRAVLKAGLAAGAVLVNPLTALAAAPPGFDQWRDNFRARALAKGISEAT 60 MKQ DS + RR +LK+ L A++ +P ALAA PPGFD+WR++FRARA+AKGIS AT Sbjct: 1 MKQADSSANHTRRTLLKSALGVAAIVASPTCALAA-PPGFDEWRESFRARAMAKGISAAT 59 Query: 61 WTRCMGRVEPDMSVFKQMRNQPEFHEQIWQYINRRVSDWRIIHGREALKKNDALFGRIER 120 W R M RVEPDMSVFKQMRNQPEFHEQ+WQYINRRVSDWRII+G+ ALK N+AL RIER Sbjct: 60 WQRAMARVEPDMSVFKQMRNQPEFHEQVWQYINRRVSDWRIINGKIALKNNEALLARIER 119 Query: 121 DFGVERGTLLALWGVESAYGDPLVQQNHMTPVFPSLAALAWNEPRRKAYWETELINAMKI 180 DFGVERGTLLALWGVESAYGDPLVQQNHMTPVFPSLAALAWNEPRRKAYWETELINA++I Sbjct: 120 DFGVERGTLLALWGVESAYGDPLVQQNHMTPVFPSLAALAWNEPRRKAYWETELINALRI 179 Query: 181 VQRGWSTPQEMNGSWAGAMGHSQWMPEVWLNVGFDYDGDGKVSPFGRPDDALGSTAKYLV 240 V +GWSTP+EM GSWAGAMGHSQWMPEVWLNVG DYDGDGKVSPFG+PDDALGSTAKYLV Sbjct: 180 VDKGWSTPEEMKGSWAGAMGHSQWMPEVWLNVGIDYDGDGKVSPFGKPDDALGSTAKYLV 239 Query: 241 NRGKWHRGEHWGYEVRAPGGGASGSRTYAAWASAGVTRADGQPFPQPNASAQLWIPVTGG 300 NRGKW RGEHWGYEVRA G SGSRTYAAWASAGVTRADGQPFPQPNASAQ+W PV GG Sbjct: 240 NRGKWRRGEHWGYEVRA-SGDVSGSRTYAAWASAGVTRADGQPFPQPNASAQMWTPVAGG 298 Query: 301 PAFLLGPNFNSVKSYNPSMNYALAICHLGDRCLGGPPFIQPFPGSERALTLAEVQEMQTR 360 P FLLGPNF SVKSYNPSMNYALAICHLGDRCLG PPFIQPFPGSERALTLAEVQEMQTR Sbjct: 299 PTFLLGPNFYSVKSYNPSMNYALAICHLGDRCLGAPPFIQPFPGSERALTLAEVQEMQTR 358 Query: 361 LTKAGFDTGGTDGRVGNDTMKAIKDFQIKMGLLPADGYGGLKVLARLRQG 410 LTKAGFDTGGTDGRVGNDTMKAIKDFQ G+ PADGYGGLKVLARLRQG Sbjct: 359 LTKAGFDTGGTDGRVGNDTMKAIKDFQQHAGITPADGYGGLKVLARLRQG 408 >ref|YP_001239979.1| putative membrane-bound lytic transglycosylase protein signal peptide [Bradyrhizobium sp. BTAi1] gb|ABQ36073.1| Putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide [Bradyrhizobium sp. BTAi1] Length = 406 Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/411 (82%), Positives = 369/411 (89%), Gaps = 5/411 (1%) Query: 1 MKQPDSPQSPARRAVLKAGLAAGAVLVNPLTALAAAPPGFDQWRDNFRARALAKGISEAT 60 M QPDSP RR +L++GL A A+LV L A AA FD WRD FR RALAKGIS+AT Sbjct: 1 MTQPDSP---TRRTLLRSGLGAAALLVPALPAAAAPAE-FDAWRDGFRGRALAKGISQAT 56 Query: 61 WTRCMGRVEPDMSVFKQMRNQPEFHEQIWQYINRRVSDWRIIHGREALKKNDALFGRIER 120 WTR M R+EPDM+VFK+MRNQPEF EQ+WQYINRRVSDWR+I+G+ AL KN+ALF RIE+ Sbjct: 57 WTRVMARLEPDMTVFKEMRNQPEFKEQLWQYINRRVSDWRVINGKAALAKNEALFARIEK 116 Query: 121 DFGVERGTLLALWGVESAYGDPLVQQNHMTPVFPSLAALAWNEPRRKAYWETELINAMKI 180 DFGVERGTLLALWGVESA+GDPLVQQNHM PVFP+LAALAWNEPRRKAYWETEL NA+KI Sbjct: 117 DFGVERGTLLALWGVESAFGDPLVQQNHMRPVFPALAALAWNEPRRKAYWETELTNALKI 176 Query: 181 VQRGWSTPQEMNGSWAGAMGHSQWMPEVWLNVGFDYDGDGKVSPFGRPDDALGSTAKYLV 240 V RGWSTP+EM GSWAGAMGH+QWMPEVWLNVGFDYDGDGK+SPFGRPDDALGSTA+YLV Sbjct: 177 VDRGWSTPEEMRGSWAGAMGHTQWMPEVWLNVGFDYDGDGKISPFGRPDDALGSTARYLV 236 Query: 241 NRGKWHRGEHWGYEVRAPGGGASGSRTYAAWASAGVTRADGQPFPQPNASAQLWIPVTGG 300 NRGK+HRGEHWGYEVRAP G SGSRTYAAW +AGVTRADGQPFPQPNA+AQLWIPV GG Sbjct: 237 NRGKYHRGEHWGYEVRAP-GNMSGSRTYAAWQAAGVTRADGQPFPQPNATAQLWIPVEGG 295 Query: 301 PAFLLGPNFNSVKSYNPSMNYALAICHLGDRCLGGPPFIQPFPGSERALTLAEVQEMQTR 360 PAFLLGPNF SVKSYNP+M+YALAICHLGDR LG PPF+QPFPGSERALTLAEVQEMQ R Sbjct: 296 PAFLLGPNFYSVKSYNPAMSYALAICHLGDRILGAPPFLQPFPGSERALTLAEVQEMQKR 355 Query: 361 LTKAGFDTGGTDGRVGNDTMKAIKDFQIKMGLLPADGYGGLKVLARLRQGG 411 LT AGFDTGGTDGRVGNDTMKAI+DFQ K GL PADGYGGLKVLA+LRQGG Sbjct: 356 LTAAGFDTGGTDGRVGNDTMKAIRDFQAKAGLTPADGYGGLKVLAKLRQGG 406 >ref|YP_318257.1| lytic murein transglycosylase [Nitrobacter winogradskyi Nb-255] gb|ABA04905.1| Lytic murein transglycosylase [Nitrobacter winogradskyi Nb-255] Length = 407 Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/410 (80%), Positives = 367/410 (89%), Gaps = 4/410 (0%) Query: 1 MKQPDSPQSPARRAVLKAGLAAGAVLVNPLTALAAAPPGFDQWRDNFRARALAKGISEAT 60 M PDS +RR L+ L A AVL P ALAA P GF+QWR FRARALAKGIS AT Sbjct: 1 MTVPDSHIRLSRRGALRC-LGAVAVLA-PFPALAAMPQGFEQWRYGFRARALAKGISSAT 58 Query: 61 WTRCMGRVEPDMSVFKQMRNQPEFHEQIWQYINRRVSDWRIIHGREALKKNDALFGRIER 120 W+RCMGR+EPDMSVF +MR QPEFHE+IWQYINRRVSDWRII G+EAL+KN+ALF RIER Sbjct: 59 WSRCMGRIEPDMSVFNKMRKQPEFHEKIWQYINRRVSDWRIIAGKEALRKNEALFSRIER 118 Query: 121 DFGVERGTLLALWGVESAYGDPLVQQNHMTPVFPSLAALAWNEPRRKAYWETELINAMKI 180 DFGVERGTLLALWGVE+A+GDPLVQ+NHM PVFPSLAALAWNEPRR+AYWETELINA++I Sbjct: 119 DFGVERGTLLALWGVETAFGDPLVQKNHMRPVFPSLAALAWNEPRRRAYWETELINALRI 178 Query: 181 VQRGWSTPQEMNGSWAGAMGHSQWMPEVWLNVGFDYDGDGKVSPFGRPDDALGSTAKYLV 240 V +GWSTP+EM GSWAGAMGHSQWMPEVWLNVG DYD DG+VSPFG+PDDALGSTA+YL+ Sbjct: 179 VDKGWSTPEEMRGSWAGAMGHSQWMPEVWLNVGIDYDRDGRVSPFGKPDDALGSTARYLI 238 Query: 241 NRGKWHRGEHWGYEVRAPGGGASGSRTYAAWASAGVTRADGQPFPQPNASAQLWIPVTGG 300 RGK+HRGEHWGYEVRAP GGASGSR+YAAWA+AGV RADGQ FPQPNASA+LWIP GG Sbjct: 239 KRGKYHRGEHWGYEVRAP-GGASGSRSYAAWAAAGVQRADGQVFPQPNASAKLWIPEPGG 297 Query: 301 PAFLLGPNFNSVKSYNPSMNYALAICHLGDRCLGGPPFIQPFPGSERALTLAEVQEMQTR 360 PAFLLGPNF +V+SYNPSMNYAL+ICHLGDR LG PPFIQPFPGSERALTLAEVQE+QTR Sbjct: 298 PAFLLGPNFYAVRSYNPSMNYALSICHLGDRILGAPPFIQPFPGSERALTLAEVQEVQTR 357 Query: 361 LTKAGFDTGGTDGRVGNDTMKAIKDFQIKMGLLPADGYGGLKVLARLRQG 410 LT+AGFDTGGTDGRVGNDTMKA+KDFQ ++G LP DGY GLKVLA+LRQG Sbjct: 358 LTQAGFDTGGTDGRVGNDTMKAVKDFQARVG-LPPDGYAGLKVLAKLRQG 406 >ref|YP_001205585.1| putative membrane-bound lytic transglycosylase protein signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL77359.1| Putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 406 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/411 (81%), Positives = 370/411 (90%), Gaps = 5/411 (1%) Query: 1 MKQPDSPQSPARRAVLKAGLAAGAVLVNPLTALAAAPPGFDQWRDNFRARALAKGISEAT 60 M QPDSP RR +L++GL A A+LV + ALAA FD WRD FRARALAKGIS+AT Sbjct: 1 MTQPDSP---TRRTLLRSGLGAAALLVPAVPALAAPAE-FDAWRDGFRARALAKGISQAT 56 Query: 61 WTRCMGRVEPDMSVFKQMRNQPEFHEQIWQYINRRVSDWRIIHGREALKKNDALFGRIER 120 WTR M R+EPDM+VF+++RNQPEF EQ+WQY+NRRVSDWR+I+G+ ALK+N+ALF RIE+ Sbjct: 57 WTRVMARLEPDMTVFRELRNQPEFKEQLWQYVNRRVSDWRVINGKVALKQNEALFARIEK 116 Query: 121 DFGVERGTLLALWGVESAYGDPLVQQNHMTPVFPSLAALAWNEPRRKAYWETELINAMKI 180 DFGVERGTLLALWGVESAYGDPLVQQNHM PVFP+LAALAWNEPRRKAYWETEL NA+KI Sbjct: 117 DFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPALAALAWNEPRRKAYWETELTNALKI 176 Query: 181 VQRGWSTPQEMNGSWAGAMGHSQWMPEVWLNVGFDYDGDGKVSPFGRPDDALGSTAKYLV 240 V RGWSTP+EM GSWAGAMGH+QWMPEVWLNVGFDYDGDGK+SPFG+PDDALGSTA+YLV Sbjct: 177 VDRGWSTPEEMRGSWAGAMGHTQWMPEVWLNVGFDYDGDGKISPFGKPDDALGSTARYLV 236 Query: 241 NRGKWHRGEHWGYEVRAPGGGASGSRTYAAWASAGVTRADGQPFPQPNASAQLWIPVTGG 300 NRGK+HRGEHWGYEVRAP G SGSRTYAAW +AGVTRADG+PFPQPNASAQLWIPV GG Sbjct: 237 NRGKYHRGEHWGYEVRAP-GNMSGSRTYAAWQAAGVTRADGEPFPQPNASAQLWIPVEGG 295 Query: 301 PAFLLGPNFNSVKSYNPSMNYALAICHLGDRCLGGPPFIQPFPGSERALTLAEVQEMQTR 360 PAFLLGPNF SVKSYNP+M+YALAICHLGDR LG PPF+QPFPGSERALTLAEVQEMQ R Sbjct: 296 PAFLLGPNFYSVKSYNPAMSYALAICHLGDRILGAPPFLQPFPGSERALTLAEVQEMQKR 355 Query: 361 LTKAGFDTGGTDGRVGNDTMKAIKDFQIKMGLLPADGYGGLKVLARLRQGG 411 LT AGF TGGTDGRVGNDTMKAI+DFQ K GL PADGYGGLKVL +LRQGG Sbjct: 356 LTAAGFATGGTDGRVGNDTMKAIRDFQAKAGLTPADGYGGLKVLTKLRQGG 406 >ref|YP_004109319.1| lytic murein transglycosylase [Rhodopseudomonas palustris DX-1] gb|ADU44586.1| lytic murein transglycosylase [Rhodopseudomonas palustris DX-1] Length = 409 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/411 (79%), Positives = 358/411 (87%), Gaps = 2/411 (0%) Query: 1 MKQPDSPQSPARRAVLKAGLAAGAVLVNPLTALAAAPPGFDQWRDNFRARALAKGISEAT 60 M DS SP RR +L+ L A +L P A AAA P FD+WRD FRA+ALAKGIS T Sbjct: 1 MPDRDSFHSPTRRRLLQTALGAAVML--PAAAHAAASPDFDRWRDGFRAKALAKGISTRT 58 Query: 61 WTRCMGRVEPDMSVFKQMRNQPEFHEQIWQYINRRVSDWRIIHGREALKKNDALFGRIER 120 W R MG +EPDMSVF +++ QPEFHEQ+WQYINRRVSDWRI GREAL++N+ALFGRIER Sbjct: 59 WDRVMGSIEPDMSVFAKLKKQPEFHEQLWQYINRRVSDWRITAGREALRRNEALFGRIER 118 Query: 121 DFGVERGTLLALWGVESAYGDPLVQQNHMTPVFPSLAALAWNEPRRKAYWETELINAMKI 180 DFGVERGTLLALWGVESAYGDPLVQQNHM PVFPSLAALAW EPRR+AYWETELINA++I Sbjct: 119 DFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWREPRRRAYWETELINALRI 178 Query: 181 VQRGWSTPQEMNGSWAGAMGHSQWMPEVWLNVGFDYDGDGKVSPFGRPDDALGSTAKYLV 240 V +GWSTP+EM GSWAGAMGHSQWMPEVWLNVG DYDGDG+VSPFGRPDDALGSTAKYLV Sbjct: 179 VDKGWSTPEEMRGSWAGAMGHSQWMPEVWLNVGIDYDGDGRVSPFGRPDDALGSTAKYLV 238 Query: 241 NRGKWHRGEHWGYEVRAPGGGASGSRTYAAWASAGVTRADGQPFPQPNASAQLWIPVTGG 300 RGK+ RGEHWGYEV APGG ASG RTY+ W+ +GVTRADGQPFP ASA +W+PV GG Sbjct: 239 RRGKYQRGEHWGYEVEAPGGAASGRRTYSEWSRSGVTRADGQPFPNSAASATMWVPVDGG 298 Query: 301 PAFLLGPNFNSVKSYNPSMNYALAICHLGDRCLGGPPFIQPFPGSERALTLAEVQEMQTR 360 P FL+GPNF +VKSYNPSMNYALAICHLGDR LGG PF+ PFPGSERALTLAEVQEMQTR Sbjct: 299 PKFLIGPNFYAVKSYNPSMNYALAICHLGDRILGGGPFVHPFPGSERALTLAEVQEMQTR 358 Query: 361 LTKAGFDTGGTDGRVGNDTMKAIKDFQIKMGLLPADGYGGLKVLARLRQGG 411 LT+AGFDTGGTDGRVGNDTMKAI+DFQ+K GL PADGYGGLKVLARLRQGG Sbjct: 359 LTRAGFDTGGTDGRVGNDTMKAIRDFQLKTGLRPADGYGGLKVLARLRQGG 409