BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0034.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239972.1| putative (S)-2-haloacid dehalogenase [Bradyr... 404 e-111 ref|NP_771004.1| haloacid dehalogenase [Bradyrhizobium japonicum... 404 e-111 ref|YP_001205579.1| putative (S)-2-haloacid dehalogenase IVA [Br... 378 e-103 ref|YP_486576.1| haloacid dehalogenase, type II [Rhodopseudomona... 364 5e-99 ref|YP_781852.1| haloacid dehalogenase, type II [Rhodopseudomona... 353 9e-96 >ref|YP_001239972.1| putative (S)-2-haloacid dehalogenase [Bradyrhizobium sp. BTAi1] gb|ABQ36066.1| putative (S)-2-haloacid dehalogenase [Bradyrhizobium sp. BTAi1] Length = 239 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/239 (81%), Positives = 210/239 (87%) Query: 1 MSDLSGVKALVFDVFGTVVDWRTSLINDFTRWGETRGIKADWTALVDGWRAVYSASMDEV 60 MSDLS VKALVFDVFGTVVDWRTSLINDFT W ++RGI+ DWTALVDGWR +Y SMDEV Sbjct: 1 MSDLSMVKALVFDVFGTVVDWRTSLINDFTAWSKSRGIQGDWTALVDGWRGLYVGSMDEV 60 Query: 61 RKNPQNGYVILDVLHRRSLEKLVAQFDIKGLSEADLQHLTLGWHRLHAWPDSVAGLTRLK 120 RK+P+ GYVILDVLHRRSLE LVAQ I GL+EADL HLT GWHRLH W DSVAGLTRLK Sbjct: 61 RKHPERGYVILDVLHRRSLETLVAQLGISGLTEADLDHLTRGWHRLHPWADSVAGLTRLK 120 Query: 121 TKYIISPLSNGNVALLTNMAKFAGLPWDLVMSAELFEHYKPDPETYLGAAKLLCLPPEQV 180 KYII+PLSNGNVALLTNMAKFAGLPWDLV+SAELF+HYKPDPETYLGAA+LL L P +V Sbjct: 121 RKYIIAPLSNGNVALLTNMAKFAGLPWDLVLSAELFQHYKPDPETYLGAARLLGLAPGEV 180 Query: 181 MMVAAHNYDLKHAQKLGLKTAFVARPTEYGPLQKVDFEATGEWDIVAKDFGEIASRMGC 239 MMVAAHN DL+ AQ+ GLKTAFVARPTEYGPLQ DFEATG WDIVA DFG IA R+GC Sbjct: 181 MMVAAHNNDLEAAQRYGLKTAFVARPTEYGPLQSRDFEATGAWDIVAADFGGIADRLGC 239 >ref|NP_771004.1| haloacid dehalogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC49629.1| blr4364 [Bradyrhizobium japonicum USDA 110] Length = 239 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/239 (82%), Positives = 211/239 (88%) Query: 1 MSDLSGVKALVFDVFGTVVDWRTSLINDFTRWGETRGIKADWTALVDGWRAVYSASMDEV 60 MSDLS VKALVFDVFGTVVDWRTSLI DF W RGI ADWTALVDGWR +Y ASMD+V Sbjct: 1 MSDLSAVKALVFDVFGTVVDWRTSLITDFMWWSRQRGISADWTALVDGWRGMYMASMDDV 60 Query: 61 RKNPQNGYVILDVLHRRSLEKLVAQFDIKGLSEADLQHLTLGWHRLHAWPDSVAGLTRLK 120 R++P+ GYV+LD LHRRSLEKLVAQF IK L+EADL +LT GWHRLH WPDSVAGLTRLK Sbjct: 61 RRHPERGYVMLDDLHRRSLEKLVAQFSIKDLTEADLDYLTKGWHRLHPWPDSVAGLTRLK 120 Query: 121 TKYIISPLSNGNVALLTNMAKFAGLPWDLVMSAELFEHYKPDPETYLGAAKLLCLPPEQV 180 +K++ISPLSNGNVALLTNMAKFAGLPWDLVMSAE+FEHYKPDPETYLGAA+LL L P +V Sbjct: 121 SKFVISPLSNGNVALLTNMAKFAGLPWDLVMSAEVFEHYKPDPETYLGAARLLGLKPGEV 180 Query: 181 MMVAAHNYDLKHAQKLGLKTAFVARPTEYGPLQKVDFEATGEWDIVAKDFGEIASRMGC 239 MMVAAHN DL AQ GLKTAFVARPTEYGPLQKVDFEATG WDIVAKDFG IA R+GC Sbjct: 181 MMVAAHNGDLAAAQNNGLKTAFVARPTEYGPLQKVDFEATGNWDIVAKDFGGIADRLGC 239 >ref|YP_001205579.1| putative (S)-2-haloacid dehalogenase IVA [Bradyrhizobium sp. ORS 278] emb|CAL77353.1| putative (S)-2-haloacid dehalogenase IVA (2-haloalkanoic acid dehalogenase IVA) (L-2-haloacid dehalogenase IVA) (Halocarboxylic acid halidohydrolase IVA) [Bradyrhizobium sp. ORS 278] Length = 239 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/239 (79%), Positives = 209/239 (87%) Query: 1 MSDLSGVKALVFDVFGTVVDWRTSLINDFTRWGETRGIKADWTALVDGWRAVYSASMDEV 60 MSDLS VKALVFDVFGTVVDWRTSLINDFT W ++RG++ DWTALVDGWR +Y SMDEV Sbjct: 1 MSDLSMVKALVFDVFGTVVDWRTSLINDFTAWSKSRGVEGDWTALVDGWRGLYVGSMDEV 60 Query: 61 RKNPQNGYVILDVLHRRSLEKLVAQFDIKGLSEADLQHLTLGWHRLHAWPDSVAGLTRLK 120 RK+P+ GY+ILDVLHR SLE LVA+ I GL+EADL +LT GWHRLH W DSVAGLTRLK Sbjct: 61 RKHPERGYLILDVLHRHSLETLVAKLGITGLTEADLDYLTRGWHRLHPWADSVAGLTRLK 120 Query: 121 TKYIISPLSNGNVALLTNMAKFAGLPWDLVMSAELFEHYKPDPETYLGAAKLLCLPPEQV 180 ++YIISPLSNGNVALLTNMAKFAGLPWDLV+SAELF+HYKPDPETYLGAA+LL L P +V Sbjct: 121 SRYIISPLSNGNVALLTNMAKFAGLPWDLVLSAELFQHYKPDPETYLGAARLLGLLPGEV 180 Query: 181 MMVAAHNYDLKHAQKLGLKTAFVARPTEYGPLQKVDFEATGEWDIVAKDFGEIASRMGC 239 MMVAAHN DL+ AQ+ GLKTAFVARPTEYGPLQ DFEATG WDIVA DF IA R+GC Sbjct: 181 MMVAAHNNDLEAAQRYGLKTAFVARPTEYGPLQNRDFEATGAWDIVAADFNGIADRLGC 239 >ref|YP_486576.1| haloacid dehalogenase, type II [Rhodopseudomonas palustris HaA2] gb|ABD07665.1| haloacid dehalogenase, type II [Rhodopseudomonas palustris HaA2] Length = 241 Score = 364 bits (935), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 173/233 (74%), Positives = 189/233 (81%) Query: 7 VKALVFDVFGTVVDWRTSLINDFTRWGETRGIKADWTALVDGWRAVYSASMDEVRKNPQN 66 VKALVFD+FGTVVDWR+SLI DFT W TRGI DW LVD WR Y SMD VRKNP Sbjct: 9 VKALVFDIFGTVVDWRSSLIADFTAWSATRGISGDWAGLVDAWRQAYVPSMDAVRKNPSA 68 Query: 67 GYVILDVLHRRSLEKLVAQFDIKGLSEADLQHLTLGWHRLHAWPDSVAGLTRLKTKYIIS 126 G+++LD LHRRSLEKLV +F I GL+E DL ++T GWHRL WPD VAGL RLK+ YIIS Sbjct: 69 GFIMLDDLHRRSLEKLVVEFGIAGLTEDDLHYMTTGWHRLKPWPDVVAGLARLKSTYIIS 128 Query: 127 PLSNGNVALLTNMAKFAGLPWDLVMSAELFEHYKPDPETYLGAAKLLCLPPEQVMMVAAH 186 PLSNGNV LLT MAK GLPWDL++ +LFEHYKPDPETYLGAA+LL LPP QVMMVAAH Sbjct: 129 PLSNGNVGLLTRMAKTVGLPWDLILGGDLFEHYKPDPETYLGAARLLNLPPGQVMMVAAH 188 Query: 187 NYDLKHAQKLGLKTAFVARPTEYGPLQKVDFEATGEWDIVAKDFGEIASRMGC 239 N DL AQKLGLKTAFVARPTEYGPLQK D+EATG WDIVA DFG IA R+GC Sbjct: 189 NNDLDAAQKLGLKTAFVARPTEYGPLQKQDYEATGAWDIVAADFGGIADRLGC 241 >ref|YP_781852.1| haloacid dehalogenase, type II [Rhodopseudomonas palustris BisA53] gb|ABJ06872.1| haloacid dehalogenase, type II [Rhodopseudomonas palustris BisA53] Length = 242 Score = 353 bits (907), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 169/239 (70%), Positives = 196/239 (82%) Query: 1 MSDLSGVKALVFDVFGTVVDWRTSLINDFTRWGETRGIKADWTALVDGWRAVYSASMDEV 60 M DL VKA+VFDVFGTVVDWRTSLI DFT W E GI ADW ALVD WR + +M+EV Sbjct: 4 MPDLHLVKAMVFDVFGTVVDWRTSLIGDFTHWSENHGISADWPALVDAWRQAHVPAMEEV 63 Query: 61 RKNPQNGYVILDVLHRRSLEKLVAQFDIKGLSEADLQHLTLGWHRLHAWPDSVAGLTRLK 120 R++P+ G+ LDVLHR+SLE+LV +F IK L+E L +L GWHRL+ WPDSV GLT LK Sbjct: 64 RQHPERGFQPLDVLHRQSLERLVEEFGIKDLAELHLDYLNRGWHRLNPWPDSVEGLTALK 123 Query: 121 TKYIISPLSNGNVALLTNMAKFAGLPWDLVMSAELFEHYKPDPETYLGAAKLLCLPPEQV 180 +II+PLSNGNVALLTNMAK+AGLPWDL++SAELFEHYKPDPETYLGAA+LL L P+QV Sbjct: 124 RNFIIAPLSNGNVALLTNMAKYAGLPWDLILSAELFEHYKPDPETYLGAARLLGLRPDQV 183 Query: 181 MMVAAHNYDLKHAQKLGLKTAFVARPTEYGPLQKVDFEATGEWDIVAKDFGEIASRMGC 239 MMVAAHNYDL AQ LGL+TAFV R TEYGPLQ DFEA G WD+VAKDF ++A++MGC Sbjct: 184 MMVAAHNYDLAAAQALGLRTAFVPRTTEYGPLQVRDFEAEGTWDLVAKDFVDLAAKMGC 242