BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0024.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770997.1| hypothetical protein blr4357 [Bradyrhizobium ja... 334 5e-90 ref|YP_001205563.1| hypothetical protein BRADO3557 [Bradyrhizobi... 320 1e-85 ref|YP_001239957.1| negative transcriptional regulator [Bradyrhi... 317 1e-84 ref|ZP_08630039.1| negative transcriptional regulator [Bradyrhiz... 275 3e-72 ref|YP_532691.1| negative transcriptional regulator [Rhodopseudo... 270 2e-70 >ref|NP_770997.1| hypothetical protein blr4357 [Bradyrhizobium japonicum USDA 110] dbj|BAC49622.1| blr4357 [Bradyrhizobium japonicum USDA 110] Length = 222 Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 168/223 (75%), Positives = 180/223 (80%), Gaps = 4/223 (1%) Query: 1 MYTPPPFRPDRAASLAFAEARGFGIACAWDGGKPIASALPFYLTYAADGTPRALFHVARH 60 MYTPP F+ DRAASL FAE RGFG CA+DG KP+AS LPFYLTYAADGTP+A FHVARH Sbjct: 1 MYTPPFFKQDRAASLKFAEERGFGTMCAFDGHKPVASPLPFYLTYAADGTPQAAFHVARH 60 Query: 61 NPLIKLA-GATSWLLAVNGADAYVSPDWYVSPDQVPTWLYQAVHLTGPVRRLSDEELAVQ 119 NPL+KLA GATSWLL VNG DAYVSPDWYVSPDQVPTWLYQ+VHLTG VR LSD+EL VQ Sbjct: 61 NPLLKLADGATSWLLVVNGPDAYVSPDWYVSPDQVPTWLYQSVHLTGSVRLLSDDELLVQ 120 Query: 120 IDALSAKFEDRLLPKKPWVSGKMTAARLEAMKKAIVGLEMMVEEVEGSFKLNQHKSETDF 179 ID LS KFE LLPKKPW SGKMTA RLEAMKK IVGL M VEEVEGSFKLNQHKS+ D+ Sbjct: 121 IDTLSDKFESWLLPKKPWTSGKMTAGRLEAMKKGIVGLVMTVEEVEGSFKLNQHKSDADY 180 Query: 180 AAVGNTLALQAEAGARGIAALMRKVRPQAFAMIQTETTALPRS 222 A+ N L Q A AR IA LM+ VRP+AFA ET L RS Sbjct: 181 TAIANALGAQPAADAREIAQLMQDVRPEAFA---AETNKLERS 220 >ref|YP_001205563.1| hypothetical protein BRADO3557 [Bradyrhizobium sp. ORS 278] emb|CAL77337.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 216 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 156/211 (73%), Positives = 175/211 (82%), Gaps = 1/211 (0%) Query: 1 MYTPPPFRPDRAASLAFAEARGFGIACAWDGGKPIASALPFYLTYAADGTPRALFHVARH 60 MYTPPPF+PDRAASL FA+ARGFG CAWDG KPIAS+LPF+L ADGTP+A FHVAR+ Sbjct: 1 MYTPPPFKPDRAASLGFADARGFGTVCAWDGTKPIASSLPFHLGALADGTPQAFFHVARN 60 Query: 61 NPLIKLA-GATSWLLAVNGADAYVSPDWYVSPDQVPTWLYQAVHLTGPVRRLSDEELAVQ 119 NPL +LA GAT WLLAVNGADAYVS DWYVSP+QVPTWLYQAVHLTGP R LSD ELA Q Sbjct: 61 NPLARLADGATPWLLAVNGADAYVSADWYVSPEQVPTWLYQAVHLTGPARLLSDAELAAQ 120 Query: 120 IDALSAKFEDRLLPKKPWVSGKMTAARLEAMKKAIVGLEMMVEEVEGSFKLNQHKSETDF 179 DALSAKFE LLPK PW S KMT RLEAM+KAIVG+ M ++ VEGSFKLNQHKSE D+ Sbjct: 121 ADALSAKFEQWLLPKPPWTSDKMTTGRLEAMRKAIVGIVMTIDAVEGSFKLNQHKSEADY 180 Query: 180 AAVGNTLALQAEAGARGIAALMRKVRPQAFA 210 AAV L QA+ GA+ I++LMR+ RP+AFA Sbjct: 181 AAVATRLGEQADIGAQQISSLMRQARPEAFA 211 >ref|YP_001239957.1| negative transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ36051.1| negative transcriptional regulator [Bradyrhizobium sp. BTAi1] Length = 216 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 151/211 (71%), Positives = 175/211 (82%), Gaps = 1/211 (0%) Query: 1 MYTPPPFRPDRAASLAFAEARGFGIACAWDGGKPIASALPFYLTYAADGTPRALFHVARH 60 MYTPPPF+PDRAASL FA+ARGFG CAWDG KPIAS +PF+L DGTP+A FHVAR+ Sbjct: 1 MYTPPPFKPDRAASLGFADARGFGTVCAWDGSKPIASLVPFHLGALNDGTPQAFFHVARN 60 Query: 61 NPLIKLA-GATSWLLAVNGADAYVSPDWYVSPDQVPTWLYQAVHLTGPVRRLSDEELAVQ 119 NPL K+A GAT WLLAV+GADAYVS DWYVSPDQVPTWLYQAVHLTG R LS+ ELA Q Sbjct: 61 NPLAKVADGATPWLLAVSGADAYVSADWYVSPDQVPTWLYQAVHLTGTARILSEAELARQ 120 Query: 120 IDALSAKFEDRLLPKKPWVSGKMTAARLEAMKKAIVGLEMMVEEVEGSFKLNQHKSETDF 179 +D +SAKFE RLLPKKPW S KMTA RLEAM+KAIVG+ M +++VEGSFKLNQHKSE D+ Sbjct: 121 VDEVSAKFEQRLLPKKPWTSDKMTAGRLEAMRKAIVGIVMTIDQVEGSFKLNQHKSEADY 180 Query: 180 AAVGNTLALQAEAGARGIAALMRKVRPQAFA 210 AA+ L Q + G++ I++LMR+ RPQAFA Sbjct: 181 AAIATRLGEQPDIGSQQISSLMRQARPQAFA 211 >ref|ZP_08630039.1| negative transcriptional regulator [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07408.1| negative transcriptional regulator [Bradyrhizobiaceae bacterium SG-6C] Length = 227 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 134/216 (62%), Positives = 160/216 (74%), Gaps = 1/216 (0%) Query: 1 MYTPPPFRPDRAASLAFAEARGFGIACAWDGGKPIASALPFYLTYAADGTPRALFHVARH 60 MY PP FR DRA LAFA ARGFG+ACA DG KP+AS +PF++ Y +DGTP FH+ARH Sbjct: 1 MYVPPAFRVDRATCLAFAAARGFGLACAHDGDKPVASPVPFHIEYGSDGTPLLCFHLARH 60 Query: 61 NPLIKLA-GATSWLLAVNGADAYVSPDWYVSPDQVPTWLYQAVHLTGPVRRLSDEELAVQ 119 NPLI A G T WL AVN ADAYVSPDWYVSPDQVPTWLY++VH+TG VR ++ ++L Sbjct: 61 NPLIAHADGVTPWLFAVNEADAYVSPDWYVSPDQVPTWLYRSVHMTGAVRIMTGQQLPDH 120 Query: 120 IDALSAKFEDRLLPKKPWVSGKMTAARLEAMKKAIVGLEMMVEEVEGSFKLNQHKSETDF 179 ++ SA+FE+ L PKKPW + KM+ R EAM KAIVG+ M VEEVEGSFKLNQ+KS+ D Sbjct: 121 LNQASARFENDLAPKKPWTADKMSPGRFEAMMKAIVGMVMTVEEVEGSFKLNQNKSDADH 180 Query: 180 AAVGNTLALQAEAGARGIAALMRKVRPQAFAMIQTE 215 AV LALQ AGA ++A MR +RPQAF E Sbjct: 181 VAVTRALALQTSAGAGILSAAMRAMRPQAFTGDDNE 216 >ref|YP_532691.1| negative transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD88372.1| negative transcriptional regulator [Rhodopseudomonas palustris BisB18] Length = 227 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 130/219 (59%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 1 MYTPPPFRPDRAASLAFAEARGFGIACAWDGGKPIASALPFYLTYAADGTPRALFHVARH 60 MYTPP F+PDRAA L FA ARGFG C WDGGKPI +A+PF + +++DGTP FHVAR Sbjct: 1 MYTPPRFQPDRAAMLGFAAARGFGTVCGWDGGKPIGAAVPFVIEFSSDGTPLLTFHVARQ 60 Query: 61 NPLIKLA-GATSWLLAVNGADAYVSPDWYVSPDQVPTWLYQAVHLTGPVRRLSDEELAVQ 119 NPL +L G T WL+AVNGADAYVS DWY SP+QVPTWLYQ+VHL+GP +SD EL Sbjct: 61 NPLTRLGDGRTPWLMAVNGADAYVSADWYASPEQVPTWLYQSVHLSGPAALMSDRELDQH 120 Query: 120 IDALSAKFEDRLLPKKPWVSGKMTAARLEAMKKAIVGLEMMVEEVEGSFKLNQHKSETDF 179 +DA++ FE L PK PW KM A R EAMK+AI+G+ M V+EVEGSFKLNQHKS+ D Sbjct: 121 LDAVTEAFESSLAPKPPWRFAKMAAGRREAMKQAIMGVMMRVDEVEGSFKLNQHKSDADH 180 Query: 180 AAVGNTLALQAEAGARGIAALMRKVRPQAFAMIQTETTA 218 AV LA + + A+ +AA MR +RPQ F T A Sbjct: 181 LAVTTALARREDCSAQHVAAQMRAMRPQLFTQTNPTTDA 219