BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0023.p (407 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08630041.1| hypothetical protein CSIRO_3143 [Bradyrhizobi... 452 e-125 ref|YP_004109342.1| putative metallo-beta-lactamase family prote... 431 e-118 ref|YP_486589.1| twin-arginine translocation pathway signal [Rho... 422 e-116 ref|YP_569617.1| twin-arginine translocation pathway signal [Rho... 422 e-116 ref|YP_532692.1| beta-lactamase-like protein [Rhodopseudomonas p... 421 e-115 >ref|ZP_08630041.1| hypothetical protein CSIRO_3143 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07410.1| hypothetical protein CSIRO_3143 [Bradyrhizobiaceae bacterium SG-6C] Length = 329 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 231/321 (71%), Positives = 266/321 (82%) Query: 1 MELTRPHALAGAAGIAAAPLLSAVPAAAAAPAADKQAPSFYRYKVGDILVTVVSDGKNVF 60 MELTR HALAGAA +AAAP +SA PA AAAP A KQ SFYRYKVGD VTVVSDG + F Sbjct: 1 MELTRRHALAGAAALAAAPAISANPAKAAAPIAGKQNASFYRYKVGDAEVTVVSDGASSF 60 Query: 61 KLEDSFIPNAKRDDVNAALEKAFMPRDMMTIWFAPLVLNTGGKLVVIDTGNGALAKASTK 120 L ++F+ NAK+D+VNAALEK F PRD MTI F PLV+NTGGKLVVIDTGNG A++K Sbjct: 61 PLPETFVLNAKKDEVNAALEKTFRPRDRMTIQFGPLVINTGGKLVVIDTGNGPATFAASK 120 Query: 121 GANGLFADNFVAAGFDPKNVDMVVISHFHGDHVNGLLTAEGTPAFPNAEVLVPATEWKFW 180 GA G FA N AAG DPK++D+VVISHFHGDHVNGLLTA+ PAFPNAEVLVPA EWKFW Sbjct: 121 GAAGQFASNMAAAGIDPKSIDIVVISHFHGDHVNGLLTADNQPAFPNAEVLVPAVEWKFW 180 Query: 181 IDDGEMSRAPAGRMQGLFKNNRNIFEAGLKKKVTPYEWGKEIAPGLTSVETVGHTPGHTS 240 +DDGEMSRA RM GLFKNNR +F+AGLKKKVTPYEWGK++APGL SVE++GHTPGHTS Sbjct: 181 MDDGEMSRASGDRMTGLFKNNRRVFDAGLKKKVTPYEWGKDVAPGLLSVESIGHTPGHTS 240 Query: 241 YVLASGPDKVFIQSDVTNNPNLFATNPGWHAFFDQDGDVAEKTRRRIYDMVVAERLQVQG 300 YVL+SG DKVFIQSDVTN+P+LFA NPGWH FDQD AE TRR++YDM+ A+R++VQG Sbjct: 241 YVLSSGADKVFIQSDVTNDPDLFARNPGWHLMFDQDPAQAEITRRKVYDMIAADRMRVQG 300 Query: 301 FHYPFPGLGHVVKDXCRHRGI 321 FHYPFPGL ++ KD +R + Sbjct: 301 FHYPFPGLANIEKDGSGYRWV 321 >ref|YP_004109342.1| putative metallo-beta-lactamase family protein [Rhodopseudomonas palustris DX-1] gb|ADU44609.1| putative metallo-beta-lactamase family protein [Rhodopseudomonas palustris DX-1] Length = 329 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 213/319 (66%), Positives = 256/319 (80%) Query: 1 MELTRPHALAGAAGIAAAPLLSAVPAAAAAPAADKQAPSFYRYKVGDILVTVVSDGKNVF 60 M+LTR HAL +A +AA PLL ++PA AAAP ADKQAPSFYRY+VGD V V+SDG N F Sbjct: 1 MDLTRRHALTASAALAATPLLRSMPAHAAAPVADKQAPSFYRYRVGDAQVNVISDGINTF 60 Query: 61 KLEDSFIPNAKRDDVNAALEKAFMPRDMMTIWFAPLVLNTGGKLVVIDTGNGALAKASTK 120 L D F+ N +D+V+ ALE +F+P+D ++I FAPLV+NTGGKLVV+DTGNG A AS+K Sbjct: 61 PLSDGFVTNVMKDEVSEALEASFLPKDKVSIQFAPLVINTGGKLVVVDTGNGPGAFASSK 120 Query: 121 GANGLFADNFVAAGFDPKNVDMVVISHFHGDHVNGLLTAEGTPAFPNAEVLVPATEWKFW 180 G G FA N AAGFDPK VD+VVISHFH DH+NGLL A G PAFPNAEVLVPA EWK++ Sbjct: 121 GNVGQFASNMAAAGFDPKAVDLVVISHFHADHINGLLDASGKPAFPNAEVLVPAAEWKYF 180 Query: 181 IDDGEMSRAPAGRMQGLFKNNRNIFEAGLKKKVTPYEWGKEIAPGLTSVETVGHTPGHTS 240 +DDGEMSRAPAGRMQ +F+ R +F+ GL KKVTPYEWGK++APGL +VET GHTPGHTS Sbjct: 181 MDDGEMSRAPAGRMQSVFQTARKVFDTGLNKKVTPYEWGKDVAPGLLAVETRGHTPGHTS 240 Query: 241 YVLASGPDKVFIQSDVTNNPNLFATNPGWHAFFDQDGDVAEKTRRRIYDMVVAERLQVQG 300 +VL+SG DKVFIQSDVTN P LF +PGWH FDQD +AE TRR+ YDM+ AE+++VQG Sbjct: 241 FVLSSGADKVFIQSDVTNLPALFVAHPGWHLMFDQDPAMAETTRRKTYDMLAAEKMRVQG 300 Query: 301 FHYPFPGLGHVVKDXCRHR 319 FH+PFP +GHV KD +R Sbjct: 301 FHFPFPAMGHVTKDGDGYR 319 >ref|YP_486589.1| twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] gb|ABD07678.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] Length = 329 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 220/319 (68%), Positives = 260/319 (81%) Query: 1 MELTRPHALAGAAGIAAAPLLSAVPAAAAAPAADKQAPSFYRYKVGDILVTVVSDGKNVF 60 M++TR HAL AA +AAAPLL + PA AAAP ADKQAPSFYRYKVGD V V+SDG N F Sbjct: 1 MDMTRRHALTAAAALAAAPLLRSAPAEAAAPLADKQAPSFYRYKVGDAQVNVISDGVNSF 60 Query: 61 KLEDSFIPNAKRDDVNAALEKAFMPRDMMTIWFAPLVLNTGGKLVVIDTGNGALAKASTK 120 L DSF+ NAK+D+VN ALE AF+P+D ++I FAPLV+NTGGKLVV+DTGNG A AS+K Sbjct: 61 PLGDSFVLNAKKDEVNKALEAAFLPKDRISINFAPLVINTGGKLVVVDTGNGPAAFASSK 120 Query: 121 GANGLFADNFVAAGFDPKNVDMVVISHFHGDHVNGLLTAEGTPAFPNAEVLVPATEWKFW 180 G G FA N AAG DPK VD+VVISHFHGDH+NGLL A+ PAFPNAEVLVPA EWK++ Sbjct: 121 GNVGQFAGNMAAAGLDPKAVDIVVISHFHGDHINGLLGADNQPAFPNAEVLVPAAEWKYF 180 Query: 181 IDDGEMSRAPAGRMQGLFKNNRNIFEAGLKKKVTPYEWGKEIAPGLTSVETVGHTPGHTS 240 +DDGEMSRA RMQG+FKN R +FEAGL KKVTPYEWGK++APGL +VE+ GHTPGHTS Sbjct: 181 MDDGEMSRASGERMQGVFKNARRVFEAGLNKKVTPYEWGKDVAPGLLAVESAGHTPGHTS 240 Query: 241 YVLASGPDKVFIQSDVTNNPNLFATNPGWHAFFDQDGDVAEKTRRRIYDMVVAERLQVQG 300 +VL+SG DKVFIQSD+TN P LF NPGWH FDQD +AE TRR++YDM+VA++++VQG Sbjct: 241 FVLSSGSDKVFIQSDITNLPALFVANPGWHLMFDQDPAMAETTRRKVYDMLVADKMRVQG 300 Query: 301 FHYPFPGLGHVVKDXCRHR 319 FHYPFP G+V KD +R Sbjct: 301 FHYPFPANGYVQKDGSGYR 319 >ref|YP_569617.1| twin-arginine translocation pathway signal [Rhodopseudomonas palustris BisB5] gb|ABE39716.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris BisB5] Length = 330 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/286 (68%), Positives = 233/286 (81%) Query: 34 DKQAPSFYRYKVGDILVTVVSDGKNVFKLEDSFIPNAKRDDVNAALEKAFMPRDMMTIWF 93 DKQAPSFYRYKVGD V ++DG N F L D F+ NAK+D++NAALE+AFMP+D MTI F Sbjct: 35 DKQAPSFYRYKVGDAQVNAIADGANTFPLADGFVVNAKKDEINAALEQAFMPKDKMTINF 94 Query: 94 APLVLNTGGKLVVIDTGNGALAKASTKGANGLFADNFVAAGFDPKNVDMVVISHFHGDHV 153 PL +NTGG+LVV+DTGNG A AS+KG G FA N AAGFDPK VD+VVISHFHGDH+ Sbjct: 95 TPLAINTGGRLVVVDTGNGEAAFASSKGNVGQFAANMAAAGFDPKAVDIVVISHFHGDHI 154 Query: 154 NGLLTAEGTPAFPNAEVLVPATEWKFWIDDGEMSRAPAGRMQGLFKNNRNIFEAGLKKKV 213 NGLLTA+ P FPNAEVLVPA EWK+++D+GEMSRA R+Q +FKN R +FEAGLKKKV Sbjct: 155 NGLLTADNQPMFPNAEVLVPAAEWKYFMDEGEMSRASGERLQSVFKNARRVFEAGLKKKV 214 Query: 214 TPYEWGKEIAPGLTSVETVGHTPGHTSYVLASGPDKVFIQSDVTNNPNLFATNPGWHAFF 273 TPYEWGK++APGL +VE GHTPGHTS+VL+SG DKVFIQSD+TN+P LF NPGWH F Sbjct: 215 TPYEWGKDVAPGLLAVEAAGHTPGHTSFVLSSGSDKVFIQSDITNHPALFVANPGWHLMF 274 Query: 274 DQDGDVAEKTRRRIYDMVVAERLQVQGFHYPFPGLGHVVKDXCRHR 319 DQD AE TRR++YDM+VAER++VQGFHYPFP G+V KD +R Sbjct: 275 DQDPAQAEATRRKVYDMLVAERMRVQGFHYPFPANGYVQKDGNGYR 320 >ref|YP_532692.1| beta-lactamase-like protein [Rhodopseudomonas palustris BisB18] gb|ABD88373.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] Length = 329 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 202/286 (70%), Positives = 236/286 (82%), Gaps = 1/286 (0%) Query: 34 DKQAPSFYRYKVGDILVTVVSDGKNVFKLEDSFIPNAKRDDVNAALEKAFMPRDMMTIWF 93 DKQAPS+YRYKVGDILVTVVSDG F L D F+ NA + +VN AL+KAF P+D +TI F Sbjct: 35 DKQAPSYYRYKVGDILVTVVSDGAATFPLADKFVLNADKSEVNEALQKAFRPKDKITISF 94 Query: 94 APLVLNTGGKLVVIDTGNGALAKASTKGANGLFADNFVAAGFDPKNVDMVVISHFHGDHV 153 PLVL TGGK VV+DTG+GA A +KGA G F N AAGFDPK VD VVISHFHGDHV Sbjct: 95 GPLVLATGGKTVVVDTGSGAAAFDKSKGAVGQFTANSAAAGFDPKAVDAVVISHFHGDHV 154 Query: 154 NGLLTAEGTPAFPNAEVLVPATEWKFWIDDGEMSRAPAGRMQGLFKNNRNIFEAGLKKKV 213 GLLTA+ PAFPNAE+LVPA EWKF++DDGEMSRAPAGRMQ +F +NR +F+A LK+KV Sbjct: 155 GGLLTADNQPAFPNAEILVPAAEWKFFMDDGEMSRAPAGRMQAVFADNRRVFDA-LKRKV 213 Query: 214 TPYEWGKEIAPGLTSVETVGHTPGHTSYVLASGPDKVFIQSDVTNNPNLFATNPGWHAFF 273 TPYEWGK++APGL +VET GHTPGHTS+VL+SG D+VFIQSDVTNNP+LFA NPGWH + Sbjct: 214 TPYEWGKDVAPGLLAVETAGHTPGHTSFVLSSGNDRVFIQSDVTNNPDLFARNPGWHITY 273 Query: 274 DQDGDVAEKTRRRIYDMVVAERLQVQGFHYPFPGLGHVVKDXCRHR 319 DQ D AE TRR++YDM+VAERLQVQG+HYPFPGLG++ KD +R Sbjct: 274 DQIPDQAEATRRKVYDMLVAERLQVQGYHYPFPGLGNIEKDGAGYR 319