BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0002.p (363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767748.1| hypothetical protein blr1108 [Bradyrhizobium ja... 548 e-154 ref|YP_568047.1| multi anti extrusion protein MatE [Rhodopseudom... 514 e-143 ref|YP_484418.1| multi anti extrusion protein MatE [Rhodopseudom... 486 e-135 ref|YP_001208581.1| putative cation-driven multidrug efflux pump... 484 e-134 ref|NP_950097.1| cation efflux pump [Rhodopseudomonas palustris ... 482 e-134 >ref|NP_767748.1| hypothetical protein blr1108 [Bradyrhizobium japonicum USDA 110] dbj|BAC46373.1| blr1108 [Bradyrhizobium japonicum USDA 110] Length = 479 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 280/362 (77%), Positives = 320/362 (88%) Query: 2 HALLIGLTFGATFMLGMLTFGPRLLELLGGRGNVLAQAIAYSQVFFGGAILPWLMNTMAG 61 HALLIG+TFG FMLGML FGP++LE+LGGRG+VL AIAY+QVFFGGA+LPWL+NTMAG Sbjct: 114 HALLIGITFGLVFMLGMLIFGPKVLEMLGGRGDVLTHAIAYTQVFFGGAVLPWLLNTMAG 173 Query: 62 ILRGTGNMKLPSTMILSSAVWQIILGGTLGLGLGPVPQFGMRGVAAGSLIAYSISISVMG 121 +LRGTGNM+LPS +IL+SA WQI+LGGTLGLGLGPVPQFGMRGVAAG+LIAY ++I VMG Sbjct: 174 VLRGTGNMRLPSFLILNSAAWQIVLGGTLGLGLGPVPQFGMRGVAAGALIAYCMNIGVMG 233 Query: 122 WYLFSGRARVRPKLKGLRVQWAMFIDILKVGAISCFSPLQSVLTISIFTHMLAQFGTAVL 181 WYLFSGRARV PKL+GLR+QWAMF DILKVGAI+CFSPLQSVLTISIFTHMLA+FGTA+L Sbjct: 234 WYLFSGRARVVPKLRGLRIQWAMFFDILKVGAIACFSPLQSVLTISIFTHMLAKFGTAIL 293 Query: 182 AGYGIGARLEFMLTSVAFAVGIASVPMIGMAVGAERVARARRIAWTAGTVSFLAVGVVGS 241 AGYGIGARLEF+LTS+AF+ GIASVPM+GMAVGA R+ARARRIAW AG +F+AVG Sbjct: 294 AGYGIGARLEFLLTSIAFSFGIASVPMVGMAVGAGRIARARRIAWIAGASAFVAVGAPAC 353 Query: 242 FIAVFPDLWVNLFTSDPHVRATSHQYLSTAAPMYAFIGLAMSMYFSSQGAAKVLGPVLAQ 301 +A+FPDLWVN+FT VRA SHQYLST AP YAFIGLA +MYFSSQGAAKV+GPVLAQ Sbjct: 354 LVALFPDLWVNIFTDSATVRAASHQYLSTVAPFYAFIGLASTMYFSSQGAAKVIGPVLAQ 413 Query: 302 TARLIFIGAGGWWLSTHEASAQNFFALAAASMGVLGVLSCLSVILTRWGKSAPVAEAQPA 361 TARLI+I A GWWLSTHEA+AQ+FF LAA+SM VLG+LSC SV+LTRWG +PA Sbjct: 414 TARLIYISATGWWLSTHEATAQSFFWLAASSMVVLGLLSCSSVVLTRWGPRKSKPAIRPA 473 Query: 362 LS 363 LS Sbjct: 474 LS 475 >ref|YP_568047.1| multi anti extrusion protein MatE [Rhodopseudomonas palustris BisB5] gb|ABE38146.1| multi antimicrobial extrusion protein MatE [Rhodopseudomonas palustris BisB5] Length = 483 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 271/364 (74%), Positives = 305/364 (83%), Gaps = 1/364 (0%) Query: 1 MHALLIGLTFGATFMLGMLTFGPRLLELLGGRGNVLAQAIAYSQVFFGGAILPWLMNTMA 60 MHALLIGL FG FMLGML FG R LELLGGRGNVL QAI Y +FF GA++PWLMNT A Sbjct: 120 MHALLIGLCFGFAFMLGMLIFGARALELLGGRGNVLTQAIGYVHIFFAGAMVPWLMNTFA 179 Query: 61 GILRGTGNMKLPSTMILSSAVWQIILGGTLGLGLGPVPQFGMRGVAAGSLIAYSISISVM 120 ILRGTGNMKLPS MIL++AV QI+LGG LGLGLGP+P FGM+GVAAG+LIA+SI +VM Sbjct: 180 AILRGTGNMKLPSLMILNAAVLQIVLGGVLGLGLGPIPSFGMQGVAAGTLIAFSIGTAVM 239 Query: 121 GWYLFSGRARVRPKLKGLRVQWAMFIDILKVGAISCFSPLQSVLTISIFTHMLAQFGTAV 180 WY+FSGRARV PK KGLR+Q MF DILKVGA++CFSPLQSVLTI+IFTHMLA FGT V Sbjct: 240 AWYIFSGRARVTPKFKGLRIQRGMFFDILKVGAVACFSPLQSVLTITIFTHMLAHFGTEV 299 Query: 181 LAGYGIGARLEFMLTSVAFAVGIASVPMIGMAVGAERVARARRIAWTAGTVSFLAVGVVG 240 LAGYGIGARLEFMLTS+AFA+GIASVPMIGMA+GA +V RAR+IAWTAG VSF +VGVVG Sbjct: 300 LAGYGIGARLEFMLTSIAFAIGIASVPMIGMAIGARQVKRARQIAWTAGLVSFASVGVVG 359 Query: 241 SFIAVFPDLWVNLFTSDPHVRATSHQYLSTAAPMYAFIGLAMSMYFSSQGAAKVLGPVLA 300 IA FPDLWV+LFT DP VR S +YL AAPMYAFIGL++SMYFSSQGAAKVLGPVLA Sbjct: 360 CVIAFFPDLWVDLFTKDPAVRLASERYLQAAAPMYAFIGLSISMYFSSQGAAKVLGPVLA 419 Query: 301 QTARLIFIGAGGWWLSTHEASAQNFFALAAASMGVLGVLSCLSVILTRWG-KSAPVAEAQ 359 QT RLIFIG GGW L+ + +A NFF LAAASM +LGV S LSV+LTRW K PV + + Sbjct: 420 QTGRLIFIGIGGWLLTVNHGTAGNFFTLAAASMVLLGVTSALSVLLTRWEPKVVPVVDPR 479 Query: 360 PALS 363 +LS Sbjct: 480 SSLS 483 >ref|YP_484418.1| multi anti extrusion protein MatE [Rhodopseudomonas palustris HaA2] gb|ABD05507.1| Multi antimicrobial extrusion protein MatE [Rhodopseudomonas palustris HaA2] Length = 484 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 257/359 (71%), Positives = 297/359 (82%), Gaps = 1/359 (0%) Query: 1 MHALLIGLTFGATFMLGMLTFGPRLLELLGGRGNVLAQAIAYSQVFFGGAILPWLMNTMA 60 MHALLIGL FG F +GMLTFG L LLGGRGNVLAQA++Y+ +FF GA++PWLMNT A Sbjct: 120 MHALLIGLCFGLVFTVGMLTFGDTALALLGGRGNVLAQAVSYAHIFFAGAVVPWLMNTFA 179 Query: 61 GILRGTGNMKLPSTMILSSAVWQIILGGTLGLGLGPVPQFGMRGVAAGSLIAYSISISVM 120 ILRGTGNMKLPS MIL++A QI+LGG LGLG GPVP+FGM GVAAG+L A+S+ VM Sbjct: 180 AILRGTGNMKLPSLMILTAAGLQIVLGGVLGLGFGPVPRFGMPGVAAGTLTAFSVGAGVM 239 Query: 121 GWYLFSGRARVRPKLKGLRVQWAMFIDILKVGAISCFSPLQSVLTISIFTHMLAQFGTAV 180 WY+FSGRA V PK KGLR+Q AMF DILKVGA++CF+PLQSVLTI+IFTHMLA+FGT + Sbjct: 240 AWYIFSGRAGVTPKFKGLRIQRAMFFDILKVGAVACFTPLQSVLTITIFTHMLARFGTEI 299 Query: 181 LAGYGIGARLEFMLTSVAFAVGIASVPMIGMAVGAERVARARRIAWTAGTVSFLAVGVVG 240 LAGYGIGARLEFMLTS+AFAVGIASVPMIGMA+GA RVARARRIAWTA VSFL VGVVG Sbjct: 300 LAGYGIGARLEFMLTSIAFAVGIASVPMIGMAIGAGRVARARRIAWTAALVSFLCVGVVG 359 Query: 241 SFIAVFPDLWVNLFTSDPHVRATSHQYLSTAAPMYAFIGLAMSMYFSSQGAAKVLGPVLA 300 S +A FP LWV+LFTSDP V+ +YL A PMYAFIGL++S+YFS+QGAA+VLGPVLA Sbjct: 360 SAVAFFPHLWVDLFTSDPGVKLAGERYLRAAGPMYAFIGLSISLYFSAQGAARVLGPVLA 419 Query: 301 QTARLIFIGAGGWWLSTHEASAQNFFALAAASMGVLGVLSCLSVILTRWG-KSAPVAEA 358 QT RLIF+ GGW L H S +FFALAAASMGVLG+ + L+V+LTRW K V +A Sbjct: 420 QTGRLIFVVLGGWLLIAHNGSVGHFFALAAASMGVLGLATALAVLLTRWSPKQVAVTDA 478 >ref|YP_001208581.1| putative cation-driven multidrug efflux pump membrane protein [Bradyrhizobium sp. ORS 278] emb|CAL80366.1| putative cation-driven multidrug efflux pump; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 482 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 252/360 (70%), Positives = 297/360 (82%), Gaps = 4/360 (1%) Query: 2 HALLIGLTFGATFMLGMLTFGPRLLELLGGRGNVLAQAIAYSQVFFGGAILPWLMNTMAG 61 HALLI L+FGATF++GML FGP LLE LGGRG VL A+AY Q+FFGGA+LPWLMN+MAG Sbjct: 116 HALLIALSFGATFLVGMLVFGPALLETLGGRGAVLDHAVAYLQIFFGGAMLPWLMNSMAG 175 Query: 62 ILRGTGNMKLPSTMILSSAVWQIILGGTLGLGLGPVPQFGMRGVAAGSLIAYSISISVMG 121 ILRGTGNMKLPS MILSSA+ QI+LGGTL L GMRGVAAG+L+A+S+SISVMG Sbjct: 176 ILRGTGNMKLPSFMILSSAMLQIVLGGTLSL----GLGLGMRGVAAGALLAFSVSISVMG 231 Query: 122 WYLFSGRARVRPKLKGLRVQWAMFIDILKVGAISCFSPLQSVLTISIFTHMLAQFGTAVL 181 WYLFSGRARVRPKL+GL++ WAMF DILKVGA++CFSPLQSVL+I+IFTHMLA FGTAVL Sbjct: 232 WYLFSGRARVRPKLRGLKISWAMFADILKVGAVACFSPLQSVLSIAIFTHMLAGFGTAVL 291 Query: 182 AGYGIGARLEFMLTSVAFAVGIASVPMIGMAVGAERVARARRIAWTAGTVSFLAVGVVGS 241 AGYGIGARLEFM+T+V F++G+ASVPM+GMA+G +ARARRIAWTAG VSF A+GV+ + Sbjct: 292 AGYGIGARLEFMMTTVGFSIGMASVPMVGMAIGGGNIARARRIAWTAGLVSFSAMGVLST 351 Query: 242 FIAVFPDLWVNLFTSDPHVRATSHQYLSTAAPMYAFIGLAMSMYFSSQGAAKVLGPVLAQ 301 IA+ P LWV++FT D R+ YL AAPMYAFIGLA++MYFSSQGAAKV+GPVLAQ Sbjct: 352 IIAIVPQLWVDIFTQDESARSAGRHYLQIAAPMYAFIGLAIAMYFSSQGAAKVIGPVLAQ 411 Query: 302 TARLIFIGAGGWWLSTHEASAQNFFALAAASMGVLGVLSCLSVILTRWGKSAPVAEAQPA 361 TARL+FI AGG +L +H A+ FF LAA SM +LGVL+ SV+LTRWG PA Sbjct: 412 TARLVFIAAGGSYLLSHAATEGQFFTLAAVSMVLLGVLTLTSVMLTRWGPQPTALSLHPA 471 >ref|NP_950097.1| cation efflux pump [Rhodopseudomonas palustris CGA009] emb|CAE30203.1| possible cation efflux pump [Rhodopseudomonas palustris CGA009] Length = 478 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 255/357 (71%), Positives = 291/357 (81%) Query: 1 MHALLIGLTFGATFMLGMLTFGPRLLELLGGRGNVLAQAIAYSQVFFGGAILPWLMNTMA 60 MHALLIGL FG F +GMLTFG R L LLGGRG VL+QA Y +FF GA++PWLMNT A Sbjct: 119 MHALLIGLCFGLVFTVGMLTFGERALALLGGRGAVLSQAAGYVHIFFAGAVVPWLMNTFA 178 Query: 61 GILRGTGNMKLPSTMILSSAVWQIILGGTLGLGLGPVPQFGMRGVAAGSLIAYSISISVM 120 ILRGTGNMKLPS MILSSAV QI+LGG LGLG GP+P+FGM GVAAG+L A+SI SVM Sbjct: 179 AILRGTGNMKLPSLMILSSAVLQIVLGGALGLGFGPIPRFGMPGVAAGTLTAFSIGASVM 238 Query: 121 GWYLFSGRARVRPKLKGLRVQWAMFIDILKVGAISCFSPLQSVLTISIFTHMLAQFGTAV 180 W +FSGRA V+P+L G R++ MFIDILKVGA+SCFSPLQSVLTI+IFTHMLA FGTAV Sbjct: 239 AWVIFSGRAGVKPRLDGFRIERGMFIDILKVGAVSCFSPLQSVLTITIFTHMLAHFGTAV 298 Query: 181 LAGYGIGARLEFMLTSVAFAVGIASVPMIGMAVGAERVARARRIAWTAGTVSFLAVGVVG 240 LAGYGIG RLEFMLTS+AFAVGIASVPMIGMA+GA RV RAR+IAWTAG VSFL VGVVG Sbjct: 299 LAGYGIGGRLEFMLTSIAFAVGIASVPMIGMAIGAGRVKRARQIAWTAGLVSFLFVGVVG 358 Query: 241 SFIAVFPDLWVNLFTSDPHVRATSHQYLSTAAPMYAFIGLAMSMYFSSQGAAKVLGPVLA 300 + IA+FP LW++LFT D VR QYL AAPMYAFIGL++SMYFS+QGAA+VLGPVLA Sbjct: 359 TGIAIFPHLWIDLFTDDAAVRLAGEQYLRAAAPMYAFIGLSISMYFSAQGAARVLGPVLA 418 Query: 301 QTARLIFIGAGGWWLSTHEASAQNFFALAAASMGVLGVLSCLSVILTRWGKSAPVAE 357 QT RL+F+ GGW L + SA +F+ LAA SM +LGV S LSV++TRWG P A Sbjct: 419 QTGRLLFVVGGGWLLIKNHGSAGSFYLLAAGSMVLLGVTSALSVLVTRWGPKPPAAS 475